RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CCL24O00175 119 aa9.59□□□□□ -0.87
CPNE1-201ENST00000317677 KRTAP10-3P60369 221 aa9.59□□□□□ -0.87
CPNE1-201ENST00000317677 HERVK_113P61574 105 aa9.59□□□□□ -0.87
CPNE1-201ENST00000317677 SNRPD3P62318 126 aaKnown RBP9.59□□□□□ -0.87
CPNE1-201ENST00000317677 DEFB114Q30KQ6 69 aa9.59□□□□□ -0.87
CPNE1-201ENST00000317677 TMEM263Q8WUH6 116 aaKnown RBP9.59□□□□□ -0.87
CPNE1-201ENST00000317677 IGKV3-20P01619 116 aa9.58□□□□□ -0.88
CPNE1-201ENST00000317677 FAM19A5Q7Z5A7 132 aaPredicted RBP9.58□□□□□ -0.88
CPNE1-201ENST00000317677 WNK1Q9H4A3 2382 aa9.58□□□□□ -0.88
CPNE1-201ENST00000317677 TRBV30A0A0K0K1B3 111 aa9.57□□□□□ -0.88
CPNE1-201ENST00000317677 H3BT86 120 aa9.57□□□□□ -0.88
CPNE1-201ENST00000317677 OR13C6PQ8NH95 151 aa9.57□□□□□ -0.88
CPNE1-201ENST00000317677 GNRH2O43555 120 aa9.57□□□□□ -0.88
CPNE1-201ENST00000317677 ACYP1P07311 99 aa9.57□□□□□ -0.88
CPNE1-201ENST00000317677 TMEM170BQ5T4T1 132 aa9.57□□□□□ -0.88
CPNE1-201ENST00000317677 C9orf153Q5TBE3 101 aa9.57□□□□□ -0.88
CPNE1-201ENST00000317677 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.57□□□□□ -0.88
CPNE1-201ENST00000317677 ANK2Q01484 3957 aa9.56□□□□□ -0.88
CPNE1-201ENST00000317677 KNCNA6PVL3 124 aa9.56□□□□□ -0.88
CPNE1-201ENST00000317677 DEFB131AP59861 70 aa9.56□□□□□ -0.88
CPNE1-201ENST00000317677 HERVK_113P63121 156 aa9.56□□□□□ -0.88
CPNE1-201ENST00000317677 MUC4Q99102 2169 aa9.56□□□□□ -0.88
CPNE1-201ENST00000317677 TRAV12-2A0A075B6T6 113 aa9.55□□□□□ -0.88
CPNE1-201ENST00000317677 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.55□□□□□ -0.88
CPNE1-201ENST00000317677 TRAV12-3A0A0B4J271 114 aa9.55□□□□□ -0.88
CPNE1-201ENST00000317677 RBMY1BA6NDE4 496 aaKnown RBP9.55□□□□□ -0.88
CPNE1-201ENST00000317677 RBMY1EA6NEQ0 496 aaKnown RBP9.55□□□□□ -0.88
CPNE1-201ENST00000317677 RBMY1DP0C7P1 496 aaKnown RBP9.55□□□□□ -0.88
CPNE1-201ENST00000317677 RNASE3P12724 160 aaKnown RBP9.55□□□□□ -0.88
CPNE1-201ENST00000317677 ZNF56Q15929 161 aa9.55□□□□□ -0.88
CPNE1-201ENST00000317677 ZNF256Q9Y2P7 627 aaPredicted RBP9.55□□□□□ -0.88
CPNE1-201ENST00000317677 A8MTW9 85 aa9.55□□□□□ -0.88
CPNE1-201ENST00000317677 SPINK13Q1W4C9 94 aa9.55□□□□□ -0.88
CPNE1-201ENST00000317677 FBN3Q75N90 2809 aa9.55□□□□□ -0.88
CPNE1-201ENST00000317677 DYNLRB2Q8TF09 96 aa9.55□□□□□ -0.88
CPNE1-201ENST00000317677 MAP6D1Q9H9H5 199 aa9.55□□□□□ -0.88
CPNE1-201ENST00000317677 LOC107984640A0A0U1RRK4 108 aa9.54□□□□□ -0.88
CPNE1-201ENST00000317677 ZNRF2Q8NHG8 242 aa9.54□□□□□ -0.88
CPNE1-201ENST00000317677 AMELXQ99217 191 aa9.54□□□□□ -0.88
CPNE1-201ENST00000317677 A4D1N5 150 aa9.54□□□□□ -0.88
CPNE1-201ENST00000317677 EIF4EBP3O60516 100 aaPredicted RBP9.54□□□□□ -0.88
CPNE1-201ENST00000317677 RBMY1A1P0DJD3 496 aaKnown RBP9.54□□□□□ -0.88
CPNE1-201ENST00000317677 RBMY1CP0DJD4 496 aa9.54□□□□□ -0.88
CPNE1-201ENST00000317677 RBMY1FQ15415 496 aaKnown RBP9.54□□□□□ -0.88
CPNE1-201ENST00000317677 C11orf86A6NJI1 115 aa9.53□□□□□ -0.88
CPNE1-201ENST00000317677 C2orf82Q6UX34 121 aa9.53□□□□□ -0.88
CPNE1-201ENST00000317677 C2orf66Q6UXQ4 117 aa9.53□□□□□ -0.88
CPNE1-201ENST00000317677 TRGV11A0A075B6L2 103 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 CRYGDP07320 174 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 MED14OSP0DP75 135 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 SUMO2P61956 95 aaKnown RBP9.52□□□□□ -0.89
CPNE1-201ENST00000317677 C3orf56Q8N813 242 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 IGLV4-69A0A075B6H9 119 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 FAM236AA0A1B0GUQ0 79 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 FAM236BA0A1B0GV22 79 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 H7C423 109 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 CRYGAP11844 174 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 NSUN5P1Q3KNT7 163 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 ODF3L2Q3SX64 289 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 SPANXN1Q5VSR9 72 aa9.52□□□□□ -0.89
CPNE1-201ENST00000317677 TRAV26-2A0A0B4J265 109 aa9.5□□□□□ -0.89
CPNE1-201ENST00000317677 M0R381 172 aa9.5□□□□□ -0.89
CPNE1-201ENST00000317677 NXPH4O95158 308 aa9.5□□□□□ -0.89
CPNE1-201ENST00000317677 S100A4P26447 101 aaKnown RBP9.5□□□□□ -0.89
CPNE1-201ENST00000317677 PMVKQ15126 192 aa9.5□□□□□ -0.89
CPNE1-201ENST00000317677 COX7CP15954 63 aa9.5□□□□□ -0.89
CPNE1-201ENST00000317677 CXCL5P42830 114 aa9.5□□□□□ -0.89
CPNE1-201ENST00000317677 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
CPNE1-201ENST00000317677 IGHV3-16A0A0C4DH30 117 aa9.49□□□□□ -0.89
CPNE1-201ENST00000317677 J3QQQ9 107 aa9.49□□□□□ -0.89
CPNE1-201ENST00000317677 PPP1R17O96001 155 aa9.49□□□□□ -0.89
CPNE1-201ENST00000317677 LINC00643Q86TS7 51 aa9.49□□□□□ -0.89
CPNE1-201ENST00000317677 TENM1Q9UKZ4 2725 aa9.49□□□□□ -0.89
CPNE1-201ENST00000317677 EMP1P54849 157 aa9.48□□□□□ -0.89
CPNE1-201ENST00000317677 TSPEAR-AS2P59090 65 aa9.48□□□□□ -0.89
CPNE1-201ENST00000317677 TMEM141Q96I45 108 aa9.48□□□□□ -0.89
CPNE1-201ENST00000317677 C9orf85Q96MD7 179 aa9.48□□□□□ -0.89
CPNE1-201ENST00000317677 PHLDA3Q9Y5J5 127 aa9.48□□□□□ -0.89
CPNE1-201ENST00000317677 IGHV1OR15-1A0A075B7D0 117 aa9.48□□□□□ -0.89
CPNE1-201ENST00000317677 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
CPNE1-201ENST00000317677 TRIAP1O43715 76 aa9.48□□□□□ -0.89
CPNE1-201ENST00000317677 IGIPA6NJ69 53 aa9.47□□□□□ -0.89
CPNE1-201ENST00000317677 LINC00315P59091 139 aa9.47□□□□□ -0.89
CPNE1-201ENST00000317677 GAGE2AQ6NT46 116 aa9.47□□□□□ -0.89
CPNE1-201ENST00000317677 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
CPNE1-201ENST00000317677 MUSTN1Q8IVN3 82 aa9.47□□□□□ -0.89
CPNE1-201ENST00000317677 C14orf178Q8N769 122 aaPredicted RBP9.47□□□□□ -0.89
CPNE1-201ENST00000317677 JPT2Q9H910 190 aa9.47□□□□□ -0.89
CPNE1-201ENST00000317677 KIF25-AS1Q9Y6Z4 181 aa9.47□□□□□ -0.89
CPNE1-201ENST00000317677 IGLV1-51P01701 117 aa9.46□□□□□ -0.89
CPNE1-201ENST00000317677 PRM2P04554 102 aa9.46□□□□□ -0.89
CPNE1-201ENST00000317677 COX6CP09669 75 aa9.46□□□□□ -0.89
CPNE1-201ENST00000317677 LGALS3P17931 250 aaKnown RBP9.46□□□□□ -0.89
CPNE1-201ENST00000317677 C2orf48Q96LS8 159 aa9.46□□□□□ -0.89
CPNE1-201ENST00000317677 NBEAL1Q6ZS30 2694 aa9.46□□□□□ -0.9
CPNE1-201ENST00000317677 SDHAF1A6NFY7 115 aa9.46□□□□□ -0.9
CPNE1-201ENST00000317677 LEPROTO15243 131 aa9.46□□□□□ -0.9
CPNE1-201ENST00000317677 TSHBP01222 138 aa9.46□□□□□ -0.9
CPNE1-201ENST00000317677 CEMP1Q6PRD7 247 aaPredicted RBP9.46□□□□□ -0.9
CPNE1-201ENST00000317677 MRAPQ8TCY5 172 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms