RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SAMD13Q5VXD3 122 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 Q6ZUT4 128 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 TMEM61Q8N0U2 210 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 IGHV3OR16-13A0A075B7E8 117 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 IGHV3-74A0A0B4J1X5 117 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 IGHV1-58A0A0C4DH39 117 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 TRIAP1O43715 76 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 DEFB114Q30KQ6 69 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 KRTAP26-1Q6PEX3 210 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 AP1S3Q96PC3 154 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 MAP6D1Q9H9H5 199 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 VCYO14598 125 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 PPP1R17O96001 155 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 TEN1Q86WV5 123 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 YAE1D1Q9NRH1 226 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 TENM2Q9NT68 2774 aa5.44□□□□□ -1.54
CNOT4-201ENST00000315544 TRBV7-7A0A0K0K1E9 115 aa5.43□□□□□ -1.54
CNOT4-201ENST00000315544 FAM240AA0A1B0GVK7 77 aa5.43□□□□□ -1.54
CNOT4-201ENST00000315544 FAM218AQ96MZ4 157 aa5.43□□□□□ -1.54
CNOT4-201ENST00000315544 J3QQQ9 107 aa5.43□□□□□ -1.54
CNOT4-201ENST00000315544 TGFAP01135 160 aa5.43□□□□□ -1.54
CNOT4-201ENST00000315544 MIAQ16674 131 aa5.43□□□□□ -1.54
CNOT4-201ENST00000315544 C21orf62-AS1Q17RA5 79 aa5.43□□□□□ -1.54
CNOT4-201ENST00000315544 NHP2Q9NX24 153 aaKnown RBP5.43□□□□□ -1.54
CNOT4-201ENST00000315544 TSSC4Q9Y5U2 329 aaPredicted RBP5.43□□□□□ -1.54
CNOT4-201ENST00000315544 HOXD3P31249 432 aaPredicted RBP5.42□□□□□ -1.54
CNOT4-201ENST00000315544 TMEM101Q96IK0 257 aa5.42□□□□□ -1.54
CNOT4-201ENST00000315544 ZNF479Q96JC4 524 aa5.42□□□□□ -1.54
CNOT4-201ENST00000315544 C2orf48Q96LS8 159 aa5.42□□□□□ -1.54
CNOT4-201ENST00000315544 EPM2AB3EWF7 344 aa5.42□□□□□ -1.54
CNOT4-201ENST00000315544 LST1O00453 97 aa5.42□□□□□ -1.54
CNOT4-201ENST00000315544 MT-ATP8P03928 68 aa5.42□□□□□ -1.54
CNOT4-201ENST00000315544 DAZ2Q13117 558 aaKnown RBP5.42□□□□□ -1.54
CNOT4-201ENST00000315544 HOXA3O43365 443 aaPredicted RBP5.42□□□□□ -1.54
CNOT4-201ENST00000315544 IFITM1P13164 125 aa5.42□□□□□ -1.54
CNOT4-201ENST00000315544 RAX2Q96IS3 184 aa5.42□□□□□ -1.54
CNOT4-201ENST00000315544 GTF2H5Q6ZYL4 71 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 C16orf92Q96LL3 132 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 SCGB3A1Q96QR1 104 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 C5orf38Q86SI9 138 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 CDC42SE2Q9NRR3 84 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 PGPEP1Q9NXJ5 209 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 CCDC168Q8NDH2 2452 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 TRAV12-2A0A075B6T6 113 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 A4D1N5 150 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 I3L3M4 83 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 VAMP3Q15836 100 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 SELENOKQ9Y6D0 94 aa5.41□□□□□ -1.54
CNOT4-201ENST00000315544 KIAA0087Q14695 138 aa5.4□□□□□ -1.54
CNOT4-201ENST00000315544 MUSTN1Q8IVN3 82 aa5.4□□□□□ -1.54
CNOT4-201ENST00000315544 LINC00482Q8N8I6 264 aa5.4□□□□□ -1.54
CNOT4-201ENST00000315544 DNAJC30Q96LL9 226 aa5.4□□□□□ -1.54
CNOT4-201ENST00000315544 KIR2DL4Q99706 377 aa5.4□□□□□ -1.54
CNOT4-201ENST00000315544 CEMP1Q6PRD7 247 aaPredicted RBP5.4□□□□□ -1.54
CNOT4-201ENST00000315544 CELA1Q9UNI1 258 aa5.4□□□□□ -1.54
CNOT4-201ENST00000315544 A0A087WWL8 130 aa5.4□□□□□ -1.55
CNOT4-201ENST00000315544 IGHV3OR16-9A0A0B4J2B5 98 aa5.4□□□□□ -1.55
CNOT4-201ENST00000315544 A0A0J9YXV3 536 aa5.4□□□□□ -1.55
CNOT4-201ENST00000315544 ANKRD29Q8N6D5 301 aa5.4□□□□□ -1.55
CNOT4-201ENST00000315544 ETDBQ3ZM63 59 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 CYSLTR1Q9Y271 337 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 UFC1Q9Y3C8 167 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 K7ERU9 68 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 FABP2P12104 132 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 S100A7P31151 101 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 TRAV8-4A0A0B4J246 113 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 TRAV12-3A0A0B4J271 114 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 TCTAP57738 103 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 HES1Q14469 280 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 PAPPA-AS1Q5QFB9 102 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 SPANXA1Q9NS26 97 aa5.39□□□□□ -1.55
CNOT4-201ENST00000315544 TRBV20-1A0A075B6N2 111 aa5.38□□□□□ -1.55
CNOT4-201ENST00000315544 PF4P02776 101 aa5.38□□□□□ -1.55
CNOT4-201ENST00000315544 OR10J6PQ8NGY7 276 aa5.38□□□□□ -1.55
CNOT4-201ENST00000315544 ERG28Q9UKR5 140 aa5.38□□□□□ -1.55
CNOT4-201ENST00000315544 TRAV8-3A0A0A6YYJ7 113 aa5.38□□□□□ -1.55
CNOT4-201ENST00000315544 HSBP1L1C9JCN9 74 aa5.38□□□□□ -1.55
CNOT4-201ENST00000315544 RAB37Q96AX2 223 aa5.38□□□□□ -1.55
CNOT4-201ENST00000315544 GCSHP23434 173 aa5.38□□□□□ -1.55
CNOT4-201ENST00000315544 UPK3BQ9BT76 320 aa5.38□□□□□ -1.55
CNOT4-201ENST00000315544 PRO1854Q9UHT4 67 aa5.38□□□□□ -1.55
CNOT4-201ENST00000315544 IGHV4-28A0A0C4DH34 117 aa5.37□□□□□ -1.55
CNOT4-201ENST00000315544 ZNF815PA8K554 130 aa5.37□□□□□ -1.55
CNOT4-201ENST00000315544 IGLV1-51P01701 117 aa5.37□□□□□ -1.55
CNOT4-201ENST00000315544 CD28P10747 220 aa5.37□□□□□ -1.55
CNOT4-201ENST00000315544 SLURP1P55000 103 aa5.37□□□□□ -1.55
CNOT4-201ENST00000315544 SPANXN1Q5VSR9 72 aa5.37□□□□□ -1.55
CNOT4-201ENST00000315544 KLK5Q9Y337 293 aaPredicted RBP5.37□□□□□ -1.55
CNOT4-201ENST00000315544 IGHV3-11P01762 117 aa5.37□□□□□ -1.55
CNOT4-201ENST00000315544 GAGE13Q4V321 117 aa5.37□□□□□ -1.55
CNOT4-201ENST00000315544 H0Y8G0 127 aa5.36□□□□□ -1.55
CNOT4-201ENST00000315544 POLQO75417 2590 aa5.36□□□□□ -1.55
CNOT4-201ENST00000315544 SPINK13Q1W4C9 94 aa5.36□□□□□ -1.55
CNOT4-201ENST00000315544 CDKN2A-AS1Q9UH64 79 aa5.36□□□□□ -1.55
CNOT4-201ENST00000315544 TRAV25A0A0B4J276 109 aa5.36□□□□□ -1.55
CNOT4-201ENST00000315544 TMEM238LA0A1B0GVL6 79 aa5.36□□□□□ -1.55
CNOT4-201ENST00000315544 FHL2Q14192 279 aa5.36□□□□□ -1.55
CNOT4-201ENST00000315544 X6R8D5 127 aa5.36□□□□□ -1.55
CNOT4-201ENST00000315544 TRBV10-2A0A0K0K1G8 114 aa5.35□□□□□ -1.55
CNOT4-201ENST00000315544 LINC01561Q8N1V8 128 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms