RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 PRAC2D3DTV9 90 aa11.7□□□□□ -0.54
HCFC1-201ENST00000310441 UBE2D2P62837 147 aa11.7□□□□□ -0.54
HCFC1-201ENST00000310441 SIRPDQ9H106 197 aa11.7□□□□□ -0.54
HCFC1-201ENST00000310441 ESM1Q9NQ30 184 aa11.7□□□□□ -0.54
HCFC1-201ENST00000310441 IGKV1D-37A0A075B6S9 117 aa11.7□□□□□ -0.54
HCFC1-201ENST00000310441 ODF3L1Q8IXM7 274 aa11.7□□□□□ -0.54
HCFC1-201ENST00000310441 LINC00467Q9BRT7 94 aa11.7□□□□□ -0.54
HCFC1-201ENST00000310441 ANKRD17O75179 2603 aaKnown RBP11.69□□□□□ -0.54
HCFC1-201ENST00000310441 COL4A4P53420 1690 aaPredicted RBP11.69□□□□□ -0.54
HCFC1-201ENST00000310441 RNF185Q96GF1 192 aa11.69□□□□□ -0.54
HCFC1-201ENST00000310441 TP73-AS1Q9UF72 201 aa11.69□□□□□ -0.54
HCFC1-201ENST00000310441 TRIAP1O43715 76 aa11.69□□□□□ -0.54
HCFC1-201ENST00000310441 MLST8Q9BVC4 326 aa11.69□□□□□ -0.54
HCFC1-201ENST00000310441 C1orf158Q8N1D5 194 aa11.68□□□□□ -0.54
HCFC1-201ENST00000310441 LINC00322Q6ZN03 302 aaPredicted RBP11.68□□□□□ -0.54
HCFC1-201ENST00000310441 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
HCFC1-201ENST00000310441 FSTL3O95633 263 aa11.68□□□□□ -0.54
HCFC1-201ENST00000310441 UBE2D4Q9Y2X8 147 aa11.68□□□□□ -0.54
HCFC1-201ENST00000310441 TLN1Q9Y490 2541 aaKnown RBP11.67□□□□□ -0.54
HCFC1-201ENST00000310441 TRBV6-8A0A0A6YYG3 113 aa11.67□□□□□ -0.54
HCFC1-201ENST00000310441 LINC00574Q9H8X3 128 aa11.67□□□□□ -0.54
HCFC1-201ENST00000310441 COX7CP15954 63 aa11.67□□□□□ -0.54
HCFC1-201ENST00000310441 FBXL19-AS1Q494R0 122 aa11.67□□□□□ -0.54
HCFC1-201ENST00000310441 TRBV6-4A0A1B0GX49 114 aa11.67□□□□□ -0.54
HCFC1-201ENST00000310441 PMAIP1Q13794 54 aa11.67□□□□□ -0.54
HCFC1-201ENST00000310441 U3KQK5 164 aa11.67□□□□□ -0.54
HCFC1-201ENST00000310441 UBE2D3P61077 147 aa11.66□□□□□ -0.54
HCFC1-201ENST00000310441 LRRC75A-AS1Q8N1F1 130 aa11.66□□□□□ -0.54
HCFC1-201ENST00000310441 DNAJC9-AS1A6NH13 148 aa11.65□□□□□ -0.54
HCFC1-201ENST00000310441 IGLV2-14P01704 120 aa11.65□□□□□ -0.54
HCFC1-201ENST00000310441 LYPD6Q86Y78 171 aa11.65□□□□□ -0.54
HCFC1-201ENST00000310441 M0R378 163 aa11.65□□□□□ -0.54
HCFC1-201ENST00000310441 TRBV6-5A0A0K0K1A5 114 aa11.65□□□□□ -0.54
HCFC1-201ENST00000310441 IGLV4-3A0A075B6K6 122 aa11.65□□□□□ -0.55
HCFC1-201ENST00000310441 DEFB131BA0A096LNP1 70 aa11.65□□□□□ -0.55
HCFC1-201ENST00000310441 CD164L2Q6UWJ8 174 aa11.64□□□□□ -0.55
HCFC1-201ENST00000310441 TNFRSF13BO14836 293 aaPredicted RBP11.64□□□□□ -0.55
HCFC1-201ENST00000310441 C3orf84H3BNL1 204 aa11.64□□□□□ -0.55
HCFC1-201ENST00000310441 UNQ9165/PRO28630Q6UXU0 137 aa11.64□□□□□ -0.55
HCFC1-201ENST00000310441 DEFB4AO15263 64 aa11.64□□□□□ -0.55
HCFC1-201ENST00000310441 IGF1P05019 195 aa11.63□□□□□ -0.55
HCFC1-201ENST00000310441 SYCNQ0VAF6 134 aa11.63□□□□□ -0.55
HCFC1-201ENST00000310441 C10orf25Q5T742 122 aa11.63□□□□□ -0.55
HCFC1-201ENST00000310441 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.63□□□□□ -0.55
HCFC1-201ENST00000310441 TTTY13Q9BZ97 58 aa11.63□□□□□ -0.55
HCFC1-201ENST00000310441 CDKN2A-AS1Q9UH64 79 aa11.63□□□□□ -0.55
HCFC1-201ENST00000310441 SMIM26A0A096LP01 95 aa11.63□□□□□ -0.55
HCFC1-201ENST00000310441 CFAP126Q5VTH2 177 aa11.63□□□□□ -0.55
HCFC1-201ENST00000310441 A6NDX4 124 aa11.62□□□□□ -0.55
HCFC1-201ENST00000310441 TRBV27A0A0K0K1C4 114 aa11.62□□□□□ -0.55
HCFC1-201ENST00000310441 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.62□□□□□ -0.55
HCFC1-201ENST00000310441 LRCOL1A6NCL2 159 aa11.61□□□□□ -0.55
HCFC1-201ENST00000310441 GRNP28799 593 aaKnown RBP11.61□□□□□ -0.55
HCFC1-201ENST00000310441 CCDC140Q96MF4 163 aa11.61□□□□□ -0.55
HCFC1-201ENST00000310441 M0QY20 66 aa11.61□□□□□ -0.55
HCFC1-201ENST00000310441 LST1O00453 97 aa11.61□□□□□ -0.55
HCFC1-201ENST00000310441 LOC107984640A0A0U1RRK4 108 aa11.61□□□□□ -0.55
HCFC1-201ENST00000310441 ZNF22P17026 224 aaPredicted RBP11.61□□□□□ -0.55
HCFC1-201ENST00000310441 Q6ZTI0 123 aa11.61□□□□□ -0.55
HCFC1-201ENST00000310441 Q6Q795 121 aa11.6□□□□□ -0.55
HCFC1-201ENST00000310441 FAM19A5Q7Z5A7 132 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-201ENST00000310441 PRYO14603 147 aa11.6□□□□□ -0.55
HCFC1-201ENST00000310441 ZFP36P26651 326 aaKnown RBP11.6□□□□□ -0.55
HCFC1-201ENST00000310441 Q8N7P7 452 aa11.6□□□□□ -0.55
HCFC1-201ENST00000310441 SPRNQ5BIV9 151 aa11.6□□□□□ -0.55
HCFC1-201ENST00000310441 ODF3BA8MYP8 253 aa11.6□□□□□ -0.55
HCFC1-201ENST00000310441 TRAV7A0A075B6U4 112 aa11.59□□□□□ -0.55
HCFC1-201ENST00000310441 PKD1L2Q7Z442 2459 aa11.59□□□□□ -0.55
HCFC1-201ENST00000310441 ZNF524Q96C55 264 aa11.59□□□□□ -0.55
HCFC1-201ENST00000310441 C6orf99Q4VX62 202 aa11.59□□□□□ -0.55
HCFC1-201ENST00000310441 CEMP1Q6PRD7 247 aaPredicted RBP11.59□□□□□ -0.55
HCFC1-201ENST00000310441 IGLV4-69A0A075B6H9 119 aa11.59□□□□□ -0.55
HCFC1-201ENST00000310441 K7EQG2 157 aa11.59□□□□□ -0.55
HCFC1-201ENST00000310441 NRACQ8N912 160 aa11.58□□□□□ -0.56
HCFC1-201ENST00000310441 SNURFQ9Y675 71 aa11.58□□□□□ -0.56
HCFC1-201ENST00000310441 TRAV10A0A0B4J240 114 aa11.58□□□□□ -0.56
HCFC1-201ENST00000310441 LY6LH3BQJ8 138 aa11.58□□□□□ -0.56
HCFC1-201ENST00000310441 P0C879 139 aa11.58□□□□□ -0.56
HCFC1-201ENST00000310441 ZNF462Q96JM2 2506 aa11.58□□□□□ -0.56
HCFC1-201ENST00000310441 Q6JHZ5 121 aa11.57□□□□□ -0.56
HCFC1-201ENST00000310441 SCXQ7RTU7 201 aa11.57□□□□□ -0.56
HCFC1-201ENST00000310441 Q6ZVQ6 151 aa11.57□□□□□ -0.56
HCFC1-201ENST00000310441 ADORA2A-AS1P86434 159 aa11.57□□□□□ -0.56
HCFC1-201ENST00000310441 MRGPRG-AS1Q2M3A8 158 aa11.57□□□□□ -0.56
HCFC1-201ENST00000310441 DEFB114Q30KQ6 69 aa11.57□□□□□ -0.56
HCFC1-201ENST00000310441 WFDC10AQ9H1F0 79 aa11.56□□□□□ -0.56
HCFC1-201ENST00000310441 E7EUB6 86 aa11.56□□□□□ -0.56
HCFC1-201ENST00000310441 C11orf1Q9H5F2 150 aa11.55□□□□□ -0.56
HCFC1-201ENST00000310441 ZNF73O43830 326 aaPredicted RBP11.55□□□□□ -0.56
HCFC1-201ENST00000310441 LELP1Q5T871 98 aa11.55□□□□□ -0.56
HCFC1-201ENST00000310441 COL27A1Q8IZC6 1860 aaPredicted RBP11.54□□□□□ -0.56
HCFC1-201ENST00000310441 Q6YL49 198 aa11.54□□□□□ -0.56
HCFC1-201ENST00000310441 SLPIP03973 132 aa11.54□□□□□ -0.56
HCFC1-201ENST00000310441 JMJD1CQ15652 2540 aa11.54□□□□□ -0.56
HCFC1-201ENST00000310441 A0A096LNI7 61 aa11.54□□□□□ -0.56
HCFC1-201ENST00000310441 ZFAND3Q9H8U3 227 aa11.53□□□□□ -0.56
HCFC1-201ENST00000310441 Q8IZM0 81 aa11.53□□□□□ -0.56
HCFC1-201ENST00000310441 IGKV2-28A0A075B6P5 120 aa11.52□□□□□ -0.56
HCFC1-201ENST00000310441 IGKV2D-28P01615 120 aa11.52□□□□□ -0.56
HCFC1-201ENST00000310441 ZNF80P51504 273 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms