RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 NSD1Q96L73 2696 aaPredicted RBP15.89■□□□□ 0.13
TPM4-201ENST00000300933 TRBV6-5A0A0K0K1A5 114 aa15.89■□□□□ 0.13
TPM4-201ENST00000300933 M0R2P5 195 aa15.89■□□□□ 0.13
TPM4-201ENST00000300933 CRLF1O75462 422 aa15.89■□□□□ 0.13
TPM4-201ENST00000300933 LY6G6DO95868 133 aa15.89■□□□□ 0.13
TPM4-201ENST00000300933 INSP01308 110 aa15.89■□□□□ 0.13
TPM4-201ENST00000300933 NTN5Q8WTR8 489 aaPredicted RBP15.89■□□□□ 0.13
TPM4-201ENST00000300933 TRAV4A0A0B4J268 109 aa15.88■□□□□ 0.13
TPM4-201ENST00000300933 HILS1P60008 231 aa15.88■□□□□ 0.13
TPM4-201ENST00000300933 C11orf72Q8NBR9 251 aa15.88■□□□□ 0.13
TPM4-201ENST00000300933 GAGE5Q13069 117 aa15.88■□□□□ 0.13
TPM4-201ENST00000300933 GAGE6Q13070 117 aa15.88■□□□□ 0.13
TPM4-201ENST00000300933 IGHV3-33P01772 117 aa15.87■□□□□ 0.13
TPM4-201ENST00000300933 CITED1Q99966 193 aa15.87■□□□□ 0.13
TPM4-201ENST00000300933 NHLRC4P0CG21 123 aaPredicted RBP15.87■□□□□ 0.13
TPM4-201ENST00000300933 ZNF415Q09FC8 603 aa15.87■□□□□ 0.13
TPM4-201ENST00000300933 MUSTN1Q8IVN3 82 aa15.87■□□□□ 0.13
TPM4-201ENST00000300933 C1orf158Q8N1D5 194 aa15.87■□□□□ 0.13
TPM4-201ENST00000300933 SNCGO76070 127 aa15.86■□□□□ 0.13
TPM4-201ENST00000300933 CEMP1Q6PRD7 247 aaPredicted RBP15.86■□□□□ 0.13
TPM4-201ENST00000300933 TMEM141Q96I45 108 aa15.86■□□□□ 0.13
TPM4-201ENST00000300933 C16orf95Q9H693 158 aa15.86■□□□□ 0.13
TPM4-201ENST00000300933 IGHV3-38A0A0C4DH36 116 aa15.86■□□□□ 0.13
TPM4-201ENST00000300933 RPL32P62910 135 aaKnown RBP15.86■□□□□ 0.13
TPM4-201ENST00000300933 GAGE2BQ13066 116 aa15.86■□□□□ 0.13
TPM4-201ENST00000300933 GAGE2EQ4V326 116 aa15.86■□□□□ 0.13
TPM4-201ENST00000300933 GAGE2DQ9UEU5 116 aa15.86■□□□□ 0.13
TPM4-201ENST00000300933 ADARB2-AS1A8MUL3 147 aa15.85■□□□□ 0.13
TPM4-201ENST00000300933 RPL35AP18077 110 aaKnown RBP15.85■□□□□ 0.13
TPM4-201ENST00000300933 KRTAP10-3P60369 221 aa15.85■□□□□ 0.13
TPM4-201ENST00000300933 TMEM263Q8WUH6 116 aaKnown RBP15.85■□□□□ 0.13
TPM4-201ENST00000300933 TIMM17AQ99595 171 aa15.85■□□□□ 0.13
TPM4-201ENST00000300933 ATRQ13535 2644 aa15.85■□□□□ 0.13
TPM4-201ENST00000300933 TEX49A0A1B0GTD5 131 aa15.84■□□□□ 0.13
TPM4-201ENST00000300933 I3L3M4 83 aa15.84■□□□□ 0.13
TPM4-201ENST00000300933 RNASE13Q5GAN3 156 aaKnown RBP15.83■□□□□ 0.13
TPM4-201ENST00000300933 FLNBO75369 2602 aaKnown RBP15.83■□□□□ 0.12
TPM4-201ENST00000300933 IGHV3-53P01767 116 aa15.82■□□□□ 0.12
TPM4-201ENST00000300933 TRAV25A0A0B4J276 109 aa15.82■□□□□ 0.12
TPM4-201ENST00000300933 TNFRSF18Q9Y5U5 241 aa15.82■□□□□ 0.12
TPM4-201ENST00000300933 INAFM1C9JVW0 142 aa15.81■□□□□ 0.12
TPM4-201ENST00000300933 RHODO00212 210 aa15.81■□□□□ 0.12
TPM4-201ENST00000300933 TRGV1A0A0A0MS02 117 aa15.81■□□□□ 0.12
TPM4-201ENST00000300933 NDUFV3P56181 108 aaKnown RBP15.81■□□□□ 0.12
TPM4-201ENST00000300933 C20orf203Q8NBC4 194 aa15.81■□□□□ 0.12
TPM4-201ENST00000300933 TRRAPQ9Y4A5 3859 aa15.8■□□□□ 0.12
TPM4-201ENST00000300933 TMEM223A0PJW6 202 aa15.8■□□□□ 0.12
TPM4-201ENST00000300933 LINC01620Q4KN68 170 aa15.8■□□□□ 0.12
TPM4-201ENST00000300933 TTC32Q5I0X7 151 aa15.8■□□□□ 0.12
TPM4-201ENST00000300933 CCDC179H3BU77 68 aa15.79■□□□□ 0.12
TPM4-201ENST00000300933 LEPROTO15243 131 aa15.79■□□□□ 0.12
TPM4-201ENST00000300933 A0A0J9YXV3 536 aa15.79■□□□□ 0.12
TPM4-201ENST00000300933 ATXN8Q156A1 80 aa15.79■□□□□ 0.12
TPM4-201ENST00000300933 GIG44P09565 113 aaPredicted RBP15.78■□□□□ 0.12
TPM4-201ENST00000300933 Q6ZTI0 123 aa15.78■□□□□ 0.12
TPM4-201ENST00000300933 SPATA3Q8NHX4 192 aa15.78■□□□□ 0.12
TPM4-201ENST00000300933 PRSS2P07478 247 aa15.77■□□□□ 0.12
TPM4-201ENST00000300933 A0A0B4J2C4 111 aa15.77■□□□□ 0.11
TPM4-201ENST00000300933 IGLV1-51P01701 117 aa15.77■□□□□ 0.11
TPM4-201ENST00000300933 ZNF22P17026 224 aaPredicted RBP15.77■□□□□ 0.11
TPM4-201ENST00000300933 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.76■□□□□ 0.11
TPM4-201ENST00000300933 IGKV2-29A2NJV5 120 aaPredicted RBP15.76■□□□□ 0.11
TPM4-201ENST00000300933 TRAV8-4A0A0B4J246 113 aa15.76■□□□□ 0.11
TPM4-201ENST00000300933 TRIAP1O43715 76 aa15.76■□□□□ 0.11
TPM4-201ENST00000300933 NPC2P61916 151 aa15.76■□□□□ 0.11
TPM4-201ENST00000300933 RHOHQ15669 191 aa15.76■□□□□ 0.11
TPM4-201ENST00000300933 SPXQ9BT56 116 aa15.76■□□□□ 0.11
TPM4-201ENST00000300933 IFITM1P13164 125 aa15.75■□□□□ 0.11
TPM4-201ENST00000300933 NOP10Q9NPE3 64 aaKnown RBP15.75■□□□□ 0.11
TPM4-201ENST00000300933 C15orf53Q8NAA6 179 aa15.74■□□□□ 0.11
TPM4-201ENST00000300933 IGLV4-3A0A075B6K6 122 aa15.74■□□□□ 0.11
TPM4-201ENST00000300933 C19orf73Q9NVV2 129 aa15.74■□□□□ 0.11
TPM4-201ENST00000300933 A0A0J9YXY3 114 aa15.73■□□□□ 0.11
TPM4-201ENST00000300933 GAGE12JA6NER3 117 aa15.73■□□□□ 0.11
TPM4-201ENST00000300933 GAGE7O76087 117 aa15.73■□□□□ 0.11
TPM4-201ENST00000300933 GAGE12FP0CL80 117 aa15.73■□□□□ 0.11
TPM4-201ENST00000300933 GAGE12GP0CL81 117 aa15.73■□□□□ 0.11
TPM4-201ENST00000300933 GAGE12IP0CL82 117 aa15.73■□□□□ 0.11
TPM4-201ENST00000300933 GAGE4Q13068 117 aa15.73■□□□□ 0.11
TPM4-201ENST00000300933 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.73■□□□□ 0.11
TPM4-201ENST00000300933 BEAN1Q3B7T3 259 aa15.72■□□□□ 0.11
TPM4-201ENST00000300933 FAM104AQ969W3 186 aa15.72■□□□□ 0.11
TPM4-201ENST00000300933 M0QXV9 152 aa15.71■□□□□ 0.11
TPM4-201ENST00000300933 PF4P02776 101 aa15.71■□□□□ 0.11
TPM4-201ENST00000300933 UBE2WQ96B02 151 aa15.71■□□□□ 0.11
TPM4-201ENST00000300933 TRAV8-3A0A0A6YYJ7 113 aa15.71■□□□□ 0.11
TPM4-201ENST00000300933 TRBV10-2A0A0K0K1G8 114 aa15.71■□□□□ 0.11
TPM4-201ENST00000300933 RS1O15537 224 aa15.71■□□□□ 0.11
TPM4-201ENST00000300933 C2orf82Q6UX34 121 aa15.71■□□□□ 0.11
TPM4-201ENST00000300933 NDUFA7O95182 113 aa15.71■□□□□ 0.1
TPM4-201ENST00000300933 LINC00467Q9BRT7 94 aa15.7■□□□□ 0.1
TPM4-201ENST00000300933 IGHV3-30-3P0DP02 117 aa15.7■□□□□ 0.1
TPM4-201ENST00000300933 TEP1Q99973 2627 aaKnown RBP15.69■□□□□ 0.1
TPM4-201ENST00000300933 CHCHD7Q9BUK0 85 aa15.69■□□□□ 0.1
TPM4-201ENST00000300933 CLEC2BQ92478 149 aa15.69■□□□□ 0.1
TPM4-201ENST00000300933 ADAMTSL4-AS1Q5T5F5 129 aa15.68■□□□□ 0.1
TPM4-201ENST00000300933 A8MZ25 164 aa15.68■□□□□ 0.1
TPM4-201ENST00000300933 TRBV30A0A0K0K1B3 111 aa15.67■□□□□ 0.1
TPM4-201ENST00000300933 H7C423 109 aa15.67■□□□□ 0.1
TPM4-201ENST00000300933 TIMM21Q9BVV7 248 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms