RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TRGV1A0A0A0MS02 117 aa17.59■□□□□ 0.41
SPTSSA-201ENST00000298130 LINC00694P0DN24 101 aa17.59■□□□□ 0.41
SPTSSA-201ENST00000298130 CRYBA4P53673 196 aa17.59■□□□□ 0.41
SPTSSA-201ENST00000298130 TINCRA0A1B0GVN0 87 aa17.58■□□□□ 0.41
SPTSSA-201ENST00000298130 CLEC2BQ92478 149 aa17.58■□□□□ 0.41
SPTSSA-201ENST00000298130 INSP01308 110 aa17.58■□□□□ 0.4
SPTSSA-201ENST00000298130 TEX49A0A1B0GTD5 131 aa17.57■□□□□ 0.4
SPTSSA-201ENST00000298130 LINC01620Q4KN68 170 aa17.57■□□□□ 0.4
SPTSSA-201ENST00000298130 SETXQ7Z333 2677 aaKnown RBP17.57■□□□□ 0.4
SPTSSA-201ENST00000298130 ODF3L2Q3SX64 289 aa17.57■□□□□ 0.4
SPTSSA-201ENST00000298130 EDA2RQ9HAV5 297 aa17.57■□□□□ 0.4
SPTSSA-201ENST00000298130 SPANXA1Q9NS26 97 aa17.57■□□□□ 0.4
SPTSSA-201ENST00000298130 A8MTW9 85 aa17.56■□□□□ 0.4
SPTSSA-201ENST00000298130 C4orf3Q8WVX3 66 aa17.56■□□□□ 0.4
SPTSSA-201ENST00000298130 FLNAP21333 2647 aaKnown RBP17.55■□□□□ 0.4
SPTSSA-201ENST00000298130 TRAV13-1A0A0B4J241 112 aa17.55■□□□□ 0.4
SPTSSA-201ENST00000298130 ATXN8Q156A1 80 aa17.55■□□□□ 0.4
SPTSSA-201ENST00000298130 TMEM101Q96IK0 257 aa17.55■□□□□ 0.4
SPTSSA-201ENST00000298130 CIDEAO60543 219 aa17.54■□□□□ 0.4
SPTSSA-201ENST00000298130 MIAQ16674 131 aa17.54■□□□□ 0.4
SPTSSA-201ENST00000298130 ICOSQ9Y6W8 199 aa17.54■□□□□ 0.4
SPTSSA-201ENST00000298130 C1orf158Q8N1D5 194 aa17.54■□□□□ 0.4
SPTSSA-201ENST00000298130 UBR5O95071 2799 aaPredicted RBP17.53■□□□□ 0.4
SPTSSA-201ENST00000298130 A0A1B0GV72 72 aa17.53■□□□□ 0.4
SPTSSA-201ENST00000298130 Q6ZTI0 123 aa17.53■□□□□ 0.4
SPTSSA-201ENST00000298130 STHQ8IWL8 128 aa17.52■□□□□ 0.4
SPTSSA-201ENST00000298130 RS1O15537 224 aa17.52■□□□□ 0.4
SPTSSA-201ENST00000298130 ZFAND6Q6FIF0 208 aa17.51■□□□□ 0.39
SPTSSA-201ENST00000298130 WFDC10AQ9H1F0 79 aa17.51■□□□□ 0.39
SPTSSA-201ENST00000298130 DEFB113Q30KQ7 82 aa17.5■□□□□ 0.39
SPTSSA-201ENST00000298130 Q9H8V8 135 aa17.5■□□□□ 0.39
SPTSSA-201ENST00000298130 GAGE12JA6NER3 117 aa17.5■□□□□ 0.39
SPTSSA-201ENST00000298130 RPL13AP40429 203 aaKnown RBP17.5■□□□□ 0.39
SPTSSA-201ENST00000298130 GAGE4Q13068 117 aa17.5■□□□□ 0.39
SPTSSA-201ENST00000298130 GAGE5Q13069 117 aa17.5■□□□□ 0.39
SPTSSA-201ENST00000298130 BEAN1Q3B7T3 259 aa17.5■□□□□ 0.39
SPTSSA-201ENST00000298130 SPANXDQ9BXN6 97 aa17.5■□□□□ 0.39
SPTSSA-201ENST00000298130 SPANXCQ9NY87 97 aa17.5■□□□□ 0.39
SPTSSA-201ENST00000298130 TRBV30A0A0K0K1B3 111 aa17.49■□□□□ 0.39
SPTSSA-201ENST00000298130 PLA2G2AP14555 144 aa17.49■□□□□ 0.39
SPTSSA-201ENST00000298130 Q8N2B8 174 aa17.49■□□□□ 0.39
SPTSSA-201ENST00000298130 LINC00242Q5T6M2 205 aa17.48■□□□□ 0.39
SPTSSA-201ENST00000298130 NTM-AS1Q6ZSK4 140 aa17.47■□□□□ 0.39
SPTSSA-201ENST00000298130 FN1P02751 2386 aaKnown RBP17.47■□□□□ 0.39
SPTSSA-201ENST00000298130 C2orf82Q6UX34 121 aa17.46■□□□□ 0.39
SPTSSA-201ENST00000298130 H7C423 109 aa17.46■□□□□ 0.39
SPTSSA-201ENST00000298130 NOP10Q9NPE3 64 aaKnown RBP17.46■□□□□ 0.39
SPTSSA-201ENST00000298130 CRLF1O75462 422 aa17.45■□□□□ 0.38
SPTSSA-201ENST00000298130 HIST2H2BCQ6DN03 193 aa17.45■□□□□ 0.38
SPTSSA-201ENST00000298130 DNAJC30Q96LL9 226 aa17.45■□□□□ 0.38
SPTSSA-201ENST00000298130 TRBV10-2A0A0K0K1G8 114 aa17.45■□□□□ 0.38
SPTSSA-201ENST00000298130 IGKV3OR2-268A0A0C4DH90 116 aa17.44■□□□□ 0.38
SPTSSA-201ENST00000298130 LOC100131303A0A0U1RQF7 123 aa17.44■□□□□ 0.38
SPTSSA-201ENST00000298130 TRAV26-1A0A087WT03 109 aa17.43■□□□□ 0.38
SPTSSA-201ENST00000298130 PIK3CD-AS1Q5SR53 167 aa17.42■□□□□ 0.38
SPTSSA-201ENST00000298130 WFDC11Q8NEX6 87 aa17.42■□□□□ 0.38
SPTSSA-201ENST00000298130 CITED2Q99967 270 aaPredicted RBP17.42■□□□□ 0.38
SPTSSA-201ENST00000298130 RPL35AP18077 110 aaKnown RBP17.41■□□□□ 0.38
SPTSSA-201ENST00000298130 ESM1Q9NQ30 184 aa17.41■□□□□ 0.38
SPTSSA-201ENST00000298130 TRAV4A0A0B4J268 109 aa17.41■□□□□ 0.38
SPTSSA-201ENST00000298130 DNAJC9-AS1A6NH13 148 aa17.41■□□□□ 0.38
SPTSSA-201ENST00000298130 CCL24O00175 119 aa17.41■□□□□ 0.38
SPTSSA-201ENST00000298130 NDUFA1O15239 70 aa17.41■□□□□ 0.38
SPTSSA-201ENST00000298130 TIRAPP58753 221 aa17.4■□□□□ 0.38
SPTSSA-201ENST00000298130 SOSTDC1Q6X4U4 206 aa17.4■□□□□ 0.38
SPTSSA-201ENST00000298130 COX6CP09669 75 aa17.4■□□□□ 0.38
SPTSSA-201ENST00000298130 LINC00308Q8TCZ7 52 aa17.4■□□□□ 0.38
SPTSSA-201ENST00000298130 RPL36AP83881 106 aaKnown RBP17.4■□□□□ 0.38
SPTSSA-201ENST00000298130 RPL36ALQ969Q0 106 aaKnown RBP17.4■□□□□ 0.38
SPTSSA-201ENST00000298130 UBE2WQ96B02 151 aa17.4■□□□□ 0.38
SPTSSA-201ENST00000298130 SMIM1B2RUZ4 78 aa17.39■□□□□ 0.37
SPTSSA-201ENST00000298130 K7EQD1 137 aa17.39■□□□□ 0.37
SPTSSA-201ENST00000298130 MEIG1Q5JSS6 88 aa17.39■□□□□ 0.37
SPTSSA-201ENST00000298130 KRTAP1-3Q8IUG1 177 aa17.39■□□□□ 0.37
SPTSSA-201ENST00000298130 RNF183Q96D59 192 aa17.39■□□□□ 0.37
SPTSSA-201ENST00000298130 GAGE7O76087 117 aa17.39■□□□□ 0.37
SPTSSA-201ENST00000298130 GAGE12FP0CL80 117 aa17.39■□□□□ 0.37
SPTSSA-201ENST00000298130 GAGE12GP0CL81 117 aa17.39■□□□□ 0.37
SPTSSA-201ENST00000298130 GAGE12IP0CL82 117 aa17.39■□□□□ 0.37
SPTSSA-201ENST00000298130 IGLV5-45A0A087WSX0 123 aa17.38■□□□□ 0.37
SPTSSA-201ENST00000298130 TMEM262E9PQX1 116 aa17.38■□□□□ 0.37
SPTSSA-201ENST00000298130 PRIMA1Q86XR5 153 aa17.38■□□□□ 0.37
SPTSSA-201ENST00000298130 YAE1D1Q9NRH1 226 aa17.38■□□□□ 0.37
SPTSSA-201ENST00000298130 ZNF843Q8N446 348 aa17.37■□□□□ 0.37
SPTSSA-201ENST00000298130 HERVK_113P63121 156 aa17.37■□□□□ 0.37
SPTSSA-201ENST00000298130 TRAV8-4A0A0B4J246 113 aa17.36■□□□□ 0.37
SPTSSA-201ENST00000298130 CIRBPQ14011 172 aaKnown RBP17.36■□□□□ 0.37
SPTSSA-201ENST00000298130 TEX29Q8N6K0 151 aa17.35■□□□□ 0.37
SPTSSA-201ENST00000298130 CLUHP3Q96NS8 147 aa17.35■□□□□ 0.37
SPTSSA-201ENST00000298130 NBEAL2Q6ZNJ1 2754 aa17.35■□□□□ 0.37
SPTSSA-201ENST00000298130 IGLV5-39A0A0G2JS06 123 aa17.34■□□□□ 0.37
SPTSSA-201ENST00000298130 LST1O00453 97 aa17.34■□□□□ 0.37
SPTSSA-201ENST00000298130 TRGV2A0A075B6R0 118 aa17.34■□□□□ 0.37
SPTSSA-201ENST00000298130 IL17DQ8TAD2 202 aa17.34■□□□□ 0.37
SPTSSA-201ENST00000298130 GIG44P09565 113 aaPredicted RBP17.34■□□□□ 0.37
SPTSSA-201ENST00000298130 CDC42SE2Q9NRR3 84 aa17.34■□□□□ 0.37
SPTSSA-201ENST00000298130 TTC32Q5I0X7 151 aa17.33■□□□□ 0.36
SPTSSA-201ENST00000298130 M0QXV9 152 aa17.32■□□□□ 0.36
SPTSSA-201ENST00000298130 SNCGO76070 127 aa17.32■□□□□ 0.36
SPTSSA-201ENST00000298130 IFITM1P13164 125 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms