RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 GIG44P09565 113 aaPredicted RBP14.18□□□□□ -0.14
NFIL3-201ENST00000297689 ARL17AQ8IVW1 177 aa14.18□□□□□ -0.14
NFIL3-201ENST00000297689 ZNF418Q8TF45 676 aaPredicted RBP14.18□□□□□ -0.14
NFIL3-201ENST00000297689 NSD1Q96L73 2696 aaPredicted RBP14.17□□□□□ -0.14
NFIL3-201ENST00000297689 IGHV3-33P01772 117 aa14.17□□□□□ -0.14
NFIL3-201ENST00000297689 LYRM7Q5U5X0 104 aa14.17□□□□□ -0.14
NFIL3-201ENST00000297689 IGLV5-45A0A087WSX0 123 aa14.16□□□□□ -0.14
NFIL3-201ENST00000297689 SFTA2Q6UW10 78 aa14.16□□□□□ -0.14
NFIL3-201ENST00000297689 TRBV20-1A0A075B6N2 111 aa14.16□□□□□ -0.14
NFIL3-201ENST00000297689 TCL1BO95988 128 aa14.16□□□□□ -0.14
NFIL3-201ENST00000297689 CYSRT1A8MQ03 144 aa14.15□□□□□ -0.14
NFIL3-201ENST00000297689 PSMB2P49721 201 aa14.15□□□□□ -0.14
NFIL3-201ENST00000297689 TIRAPP58753 221 aa14.15□□□□□ -0.14
NFIL3-201ENST00000297689 SBSPONQ8IVN8 264 aa14.15□□□□□ -0.14
NFIL3-201ENST00000297689 TRGV1A0A0A0MS02 117 aa14.14□□□□□ -0.15
NFIL3-201ENST00000297689 TRBV10-1A0A0K0K1A3 114 aa14.14□□□□□ -0.15
NFIL3-201ENST00000297689 ADARB2-AS1A8MUL3 147 aa14.14□□□□□ -0.15
NFIL3-201ENST00000297689 ATP6V0E2Q8NHE4 81 aa14.14□□□□□ -0.15
NFIL3-201ENST00000297689 FAM110AQ9BQ89 295 aa14.14□□□□□ -0.15
NFIL3-201ENST00000297689 C19orf73Q9NVV2 129 aa14.14□□□□□ -0.15
NFIL3-201ENST00000297689 NDUFA12Q9UI09 145 aa14.14□□□□□ -0.15
NFIL3-201ENST00000297689 IGHV3OR16-12A0A075B7B8 117 aa14.13□□□□□ -0.15
NFIL3-201ENST00000297689 Q6ZTI0 123 aa14.13□□□□□ -0.15
NFIL3-201ENST00000297689 SPANXDQ9BXN6 97 aa14.13□□□□□ -0.15
NFIL3-201ENST00000297689 SPANXCQ9NY87 97 aa14.13□□□□□ -0.15
NFIL3-201ENST00000297689 J3QR89 54 aa14.13□□□□□ -0.15
NFIL3-201ENST00000297689 NDUFA7O95182 113 aa14.13□□□□□ -0.15
NFIL3-201ENST00000297689 INSL3P51460 131 aa14.13□□□□□ -0.15
NFIL3-201ENST00000297689 ZFAND6Q6FIF0 208 aa14.13□□□□□ -0.15
NFIL3-201ENST00000297689 FAM19A3Q7Z5A8 133 aa14.13□□□□□ -0.15
NFIL3-201ENST00000297689 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.13□□□□□ -0.15
NFIL3-201ENST00000297689 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.12□□□□□ -0.15
NFIL3-201ENST00000297689 CMC4P56277 68 aaPredicted RBP14.12□□□□□ -0.15
NFIL3-201ENST00000297689 ADAMTSL4-AS1Q5T5F5 129 aa14.12□□□□□ -0.15
NFIL3-201ENST00000297689 TRAV4A0A0B4J268 109 aa14.11□□□□□ -0.15
NFIL3-201ENST00000297689 PLAC8L1A1L4L8 177 aa14.11□□□□□ -0.15
NFIL3-201ENST00000297689 A8MZ25 164 aa14.11□□□□□ -0.15
NFIL3-201ENST00000297689 NTM-AS1Q6ZSK4 140 aa14.11□□□□□ -0.15
NFIL3-201ENST00000297689 CDKN2A-AS1Q9UH64 79 aa14.11□□□□□ -0.15
NFIL3-201ENST00000297689 CSDC2Q9Y534 153 aaKnown RBP14.11□□□□□ -0.15
NFIL3-201ENST00000297689 IGLV1-51P01701 117 aa14.11□□□□□ -0.15
NFIL3-201ENST00000297689 SPINK8P0C7L1 97 aa14.11□□□□□ -0.15
NFIL3-201ENST00000297689 DAZ2Q13117 558 aaKnown RBP14.11□□□□□ -0.15
NFIL3-201ENST00000297689 NIPBLQ6KC79 2804 aaeCLIP14.1□□□□□ -0.15
NFIL3-201ENST00000297689 K7EQD1 137 aa14.1□□□□□ -0.15
NFIL3-201ENST00000297689 SPATA25Q9BR10 227 aa14.1□□□□□ -0.15
NFIL3-201ENST00000297689 C1QTNF4Q9BXJ3 329 aa14.1□□□□□ -0.15
NFIL3-201ENST00000297689 FN1P02751 2386 aaKnown RBP14.1□□□□□ -0.15
NFIL3-201ENST00000297689 LINC00694P0DN24 101 aa14.09□□□□□ -0.15
NFIL3-201ENST00000297689 FOXI1Q12951 378 aa14.09□□□□□ -0.15
NFIL3-201ENST00000297689 GEMIN7Q9H840 131 aaKnown RBP14.09□□□□□ -0.15
NFIL3-201ENST00000297689 ERG28Q9UKR5 140 aa14.09□□□□□ -0.15
NFIL3-201ENST00000297689 KRTAP10-3P60369 221 aa14.08□□□□□ -0.15
NFIL3-201ENST00000297689 RPL36AP83881 106 aaKnown RBP14.08□□□□□ -0.15
NFIL3-201ENST00000297689 RPL36ALQ969Q0 106 aaKnown RBP14.08□□□□□ -0.15
NFIL3-201ENST00000297689 RNF183Q96D59 192 aa14.08□□□□□ -0.15
NFIL3-201ENST00000297689 SETD2Q9BYW2 2564 aaPredicted RBP14.08□□□□□ -0.16
NFIL3-201ENST00000297689 IGLV5-39A0A0G2JS06 123 aa14.08□□□□□ -0.16
NFIL3-201ENST00000297689 GAGE12HA6NDE8 117 aa14.08□□□□□ -0.16
NFIL3-201ENST00000297689 TIMM17BO60830 172 aa14.08□□□□□ -0.16
NFIL3-201ENST00000297689 COX6A2Q02221 97 aa14.08□□□□□ -0.16
NFIL3-201ENST00000297689 LINC00242Q5T6M2 205 aa14.08□□□□□ -0.16
NFIL3-201ENST00000297689 DAZ4Q86SG3 579 aaKnown RBP14.08□□□□□ -0.16
NFIL3-201ENST00000297689 CSNK1G2-AS1Q8NCQ2 148 aa14.08□□□□□ -0.16
NFIL3-201ENST00000297689 TMEM101Q96IK0 257 aa14.08□□□□□ -0.16
NFIL3-201ENST00000297689 DAZ3Q9NR90 486 aaKnown RBP14.08□□□□□ -0.16
NFIL3-201ENST00000297689 MIAQ16674 131 aa14.07□□□□□ -0.16
NFIL3-201ENST00000297689 F8P00451 2351 aa14.07□□□□□ -0.16
NFIL3-201ENST00000297689 INAFM1C9JVW0 142 aa14.06□□□□□ -0.16
NFIL3-201ENST00000297689 WFDC10AQ9H1F0 79 aa14.06□□□□□ -0.16
NFIL3-201ENST00000297689 NOP10Q9NPE3 64 aaKnown RBP14.06□□□□□ -0.16
NFIL3-201ENST00000297689 NDUFA1O15239 70 aa14.05□□□□□ -0.16
NFIL3-201ENST00000297689 DGAT2L7PQ6IED9 249 aa14.05□□□□□ -0.16
NFIL3-201ENST00000297689 JMJD1CQ15652 2540 aa14.05□□□□□ -0.16
NFIL3-201ENST00000297689 M0QXV9 152 aa14.05□□□□□ -0.16
NFIL3-201ENST00000297689 SCGB1C2P0DMR2 95 aa14.05□□□□□ -0.16
NFIL3-201ENST00000297689 TEN1Q86WV5 123 aa14.05□□□□□ -0.16
NFIL3-201ENST00000297689 C16orf74Q96GX8 76 aa14.05□□□□□ -0.16
NFIL3-201ENST00000297689 CARD19Q96LW7 228 aa14.05□□□□□ -0.16
NFIL3-201ENST00000297689 OVOL2Q9BRP0 275 aa14.05□□□□□ -0.16
NFIL3-201ENST00000297689 TRBV30A0A0K0K1B3 111 aa14.04□□□□□ -0.16
NFIL3-201ENST00000297689 HERVK_113P63121 156 aa14.04□□□□□ -0.16
NFIL3-201ENST00000297689 PRSS2P07478 247 aa14.03□□□□□ -0.16
NFIL3-201ENST00000297689 LINC01600Q96MT4 127 aa14.03□□□□□ -0.16
NFIL3-201ENST00000297689 SIGMAR1Q99720 223 aa14.03□□□□□ -0.16
NFIL3-201ENST00000297689 GTSF1LQ9H1H1 148 aa14.03□□□□□ -0.16
NFIL3-201ENST00000297689 CDC42SE2Q9NRR3 84 aa14.03□□□□□ -0.16
NFIL3-201ENST00000297689 IFITM1P13164 125 aa14.02□□□□□ -0.17
NFIL3-201ENST00000297689 NOTCH3Q9UM47 2321 aa14.01□□□□□ -0.17
NFIL3-201ENST00000297689 GAGE12JA6NER3 117 aa14.01□□□□□ -0.17
NFIL3-201ENST00000297689 GAGE4Q13068 117 aa14.01□□□□□ -0.17
NFIL3-201ENST00000297689 GAGE5Q13069 117 aa14.01□□□□□ -0.17
NFIL3-201ENST00000297689 CIDEAO60543 219 aa14□□□□□ -0.17
NFIL3-201ENST00000297689 PPDPFLQ8WWR9 84 aa14□□□□□ -0.17
NFIL3-201ENST00000297689 TRBV6-4A0A1B0GX49 114 aa14□□□□□ -0.17
NFIL3-201ENST00000297689 SMIM1B2RUZ4 78 aa14□□□□□ -0.17
NFIL3-201ENST00000297689 F5H768 121 aa13.99□□□□□ -0.17
NFIL3-201ENST00000297689 H7C2G1 150 aa13.99□□□□□ -0.17
NFIL3-201ENST00000297689 TRIAP1O43715 76 aa13.99□□□□□ -0.17
NFIL3-201ENST00000297689 RPL35AP18077 110 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms