RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 ZNF837Q96EG3 531 aaPredicted RBP3.68□□□□□ -1.82
CSMD3-201ENST00000297405 IGLV3-9A0A075B6K5 115 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 K7EIM0 57 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 INSL3P51460 131 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 IGKV1-39P01597 117 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 IGKV1D-39P04432 117 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 C11orf1Q9H5F2 150 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 C17orf58Q2M2W7 97 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 LINC00474Q9P2X8 69 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 FLNBO75369 2602 aaKnown RBP3.68□□□□□ -1.82
CSMD3-201ENST00000297405 IGLV1-44P01699 117 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 DEFB105AQ8NG35 78 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 HHLA3Q9XRX5 114 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 APCP25054 2843 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 HILS1P60008 231 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 LINC01561Q8N1V8 128 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 SNURFQ9Y675 71 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 CRYGDP07320 174 aa3.68□□□□□ -1.82
CSMD3-201ENST00000297405 TEX15Q9BXT5 2789 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 ATP6V0E1O15342 81 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 Q8N3U1 123 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 FLVCR1-AS1Q8TAF5 88 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 P0C879 139 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 FHL1Q13642 323 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 ZFAND2AQ8N6M9 145 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 THSD7BQ9C0I4 1608 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 I3L2K1 104 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 C3orf56Q8N813 242 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 SETXQ7Z333 2677 aaKnown RBP3.67□□□□□ -1.82
CSMD3-201ENST00000297405 A8MZ25 164 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 ELOF1P60002 83 aaKnown RBP3.67□□□□□ -1.82
CSMD3-201ENST00000297405 C17orf82Q86X59 251 aaPredicted RBP3.67□□□□□ -1.82
CSMD3-201ENST00000297405 PRSS33Q8NF86 280 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 ITPR1Q14643 2758 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.67□□□□□ -1.82
CSMD3-201ENST00000297405 IGKV2-29A2NJV5 120 aaPredicted RBP3.67□□□□□ -1.82
CSMD3-201ENST00000297405 IGHV3-53P01767 116 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 CCL18P55774 89 aa3.67□□□□□ -1.82
CSMD3-201ENST00000297405 PRB4P10163 310 aaPredicted RBP3.67□□□□□ -1.82
CSMD3-201ENST00000297405 C9orf106Q8NAJ2 232 aa3.66□□□□□ -1.82
CSMD3-201ENST00000297405 IGHV4-28A0A0C4DH34 117 aa3.66□□□□□ -1.82
CSMD3-201ENST00000297405 KRTAP27-1Q3LI81 207 aa3.66□□□□□ -1.82
CSMD3-201ENST00000297405 IGF1P05019 195 aa3.66□□□□□ -1.82
CSMD3-201ENST00000297405 GYPEP15421 78 aa3.66□□□□□ -1.82
CSMD3-201ENST00000297405 SPRR3Q9UBC9 169 aa3.66□□□□□ -1.82
CSMD3-201ENST00000297405 NCR3O14931 201 aa3.66□□□□□ -1.82
CSMD3-201ENST00000297405 IL17DQ8TAD2 202 aa3.66□□□□□ -1.82
CSMD3-201ENST00000297405 Q6ZVQ6 151 aa3.66□□□□□ -1.82
CSMD3-201ENST00000297405 RPL39P62891 51 aaKnown RBP3.65□□□□□ -1.82
CSMD3-201ENST00000297405 LYPD6Q86Y78 171 aa3.65□□□□□ -1.82
CSMD3-201ENST00000297405 C4orf3Q8WVX3 66 aa3.65□□□□□ -1.82
CSMD3-201ENST00000297405 PRO0255Q9UI72 69 aa3.65□□□□□ -1.82
CSMD3-201ENST00000297405 Q8IZM0 81 aa3.65□□□□□ -1.82
CSMD3-201ENST00000297405 PRR15Q8IV56 129 aa3.65□□□□□ -1.82
CSMD3-201ENST00000297405 WT1P19544 449 aaPredicted RBP3.65□□□□□ -1.82
CSMD3-201ENST00000297405 Q8N814 137 aa3.65□□□□□ -1.82
CSMD3-201ENST00000297405 TGFBR3LH3BV60 316 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 CD24P25063 80 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 MSMBP08118 114 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 IGLV4-3A0A075B6K6 122 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 IGKV2D-24A0A075B6R9 120 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 IGHV3OR16-10A0A075B7F0 116 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 TRBV6-4A0A1B0GX49 114 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 M0R378 163 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 DEFB114Q30KQ6 69 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 KLKP1Q107X0 134 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 COX8CQ7Z4L0 72 aa3.65□□□□□ -1.83
CSMD3-201ENST00000297405 NOP10Q9NPE3 64 aaKnown RBP3.65□□□□□ -1.83
CSMD3-201ENST00000297405 IGFL3Q6UXB1 125 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 CHCHD7Q9BUK0 85 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 FAM27E3Q08E93 113 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 DEFB124Q8NES8 71 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 PLA2G2FQ9BZM2 168 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 CGB7P0DN87 165 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 ACYP2P14621 99 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 Q9HAA7 133 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 C6orf99Q4VX62 202 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 TPSG1Q9NRR2 321 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 Q0VFX4 171 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 WFDC10BQ8IUB3 73 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 ZFAND3Q9H8U3 227 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 A0A087WV48 116 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 LINC01548A6NM66 108 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 ZNF292O60281 2723 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 PSPHP1O15172 72 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 B3GALT5-AS1P59052 145 aa3.64□□□□□ -1.83
CSMD3-201ENST00000297405 C10orf25Q5T742 122 aa3.63□□□□□ -1.83
CSMD3-201ENST00000297405 PRB3Q04118 309 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-201ENST00000297405 CDIP1Q9H305 208 aa3.63□□□□□ -1.83
CSMD3-201ENST00000297405 M0QY20 66 aa3.63□□□□□ -1.83
CSMD3-201ENST00000297405 LINC00269Q8N2A0 174 aa3.63□□□□□ -1.83
CSMD3-201ENST00000297405 GNRH2O43555 120 aa3.63□□□□□ -1.83
CSMD3-201ENST00000297405 LINC01546A6NGU7 62 aa3.63□□□□□ -1.83
CSMD3-201ENST00000297405 ZNF73O43830 326 aaPredicted RBP3.63□□□□□ -1.83
CSMD3-201ENST00000297405 CGB3P0DN86 165 aa3.63□□□□□ -1.83
CSMD3-201ENST00000297405 Q6ZR03 302 aa3.62□□□□□ -1.83
CSMD3-201ENST00000297405 C1orf158Q8N1D5 194 aa3.62□□□□□ -1.83
CSMD3-201ENST00000297405 C9orf66Q5T8R8 295 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms