RNA–Protein interactions for RNA: ENST00000293861.7

SNRNP25-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNRNP25, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-201ENST00000293861 LYRM9A8MSI8 78 aa15.19■□□□□ 0.02
SNRNP25-201ENST00000293861 LEPROTO15243 131 aa15.19■□□□□ 0.02
SNRNP25-201ENST00000293861 LINC00694P0DN24 101 aa15.19■□□□□ 0.02
SNRNP25-201ENST00000293861 GCSHP23434 173 aa15.19■□□□□ 0.02
SNRNP25-201ENST00000293861 H3BRM9 83 aa15.18■□□□□ 0.02
SNRNP25-201ENST00000293861 LOC100131303A0A0U1RQF7 123 aa15.17■□□□□ 0.02
SNRNP25-201ENST00000293861 J3QQQ9 107 aa15.17■□□□□ 0.02
SNRNP25-201ENST00000293861 DEFB130BP0DP73 79 aa15.17■□□□□ 0.02
SNRNP25-201ENST00000293861 DEFB130AP0DP74 79 aa15.17■□□□□ 0.02
SNRNP25-201ENST00000293861 TSPEAR-AS2P59090 65 aa15.17■□□□□ 0.02
SNRNP25-201ENST00000293861 OXLD1Q5BKU9 147 aa15.17■□□□□ 0.02
SNRNP25-201ENST00000293861 RNASE13Q5GAN3 156 aaKnown RBP15.17■□□□□ 0.02
SNRNP25-201ENST00000293861 DGAT2L7PQ6IED9 249 aa15.17■□□□□ 0.02
SNRNP25-201ENST00000293861 FXYD2P54710 66 aa15.17■□□□□ 0.02
SNRNP25-201ENST00000293861 H7C423 109 aa15.16■□□□□ 0.02
SNRNP25-201ENST00000293861 UBE2D1P51668 147 aa15.16■□□□□ 0.02
SNRNP25-201ENST00000293861 EGFEM1PQ0D2K5 195 aa15.16■□□□□ 0.02
SNRNP25-201ENST00000293861 HIST1H4GQ99525 98 aa15.15■□□□□ 0.02
SNRNP25-201ENST00000293861 MIFP14174 115 aa15.15■□□□□ 0.02
SNRNP25-201ENST00000293861 PLEKHB2Q96CS7 222 aa15.15■□□□□ 0.02
SNRNP25-201ENST00000293861 TMEM243Q9BU79 118 aa15.15■□□□□ 0.02
SNRNP25-201ENST00000293861 LGALS3P17931 250 aaKnown RBP15.14■□□□□ 0.01
SNRNP25-201ENST00000293861 SCGB1D4Q6XE38 83 aa15.14■□□□□ 0.01
SNRNP25-201ENST00000293861 RNF183Q96D59 192 aa15.14■□□□□ 0.01
SNRNP25-201ENST00000293861 TRRAPQ9Y4A5 3859 aa15.14■□□□□ 0.01
SNRNP25-201ENST00000293861 TIRAPP58753 221 aa15.13■□□□□ 0.01
SNRNP25-201ENST00000293861 FAM222AQ5U5X8 452 aa15.13■□□□□ 0.01
SNRNP25-201ENST00000293861 FAM19A3Q7Z5A8 133 aa15.13■□□□□ 0.01
SNRNP25-201ENST00000293861 IGHV4-28A0A0C4DH34 117 aa15.13■□□□□ 0.01
SNRNP25-201ENST00000293861 KRTAP10-11P60412 298 aa15.13■□□□□ 0.01
SNRNP25-201ENST00000293861 A0A0J9YY99 117 aa15.12■□□□□ 0.01
SNRNP25-201ENST00000293861 PTTG1IPP53801 180 aa15.12■□□□□ 0.01
SNRNP25-201ENST00000293861 IGLV5-45A0A087WSX0 123 aa15.11■□□□□ 0.01
SNRNP25-201ENST00000293861 A8MZ25 164 aa15.11■□□□□ 0.01
SNRNP25-201ENST00000293861 K7EP13 123 aa15.11■□□□□ 0.01
SNRNP25-201ENST00000293861 Q8NAQ8 132 aa15.11■□□□□ 0.01
SNRNP25-201ENST00000293861 CDC42SE2Q9NRR3 84 aa15.11■□□□□ 0.01
SNRNP25-201ENST00000293861 FBN1P35555 2871 aaKnown RBP15.11■□□□□ 0.01
SNRNP25-201ENST00000293861 C9orf118A6NHY6 69 aa15.11■□□□□ 0.01
SNRNP25-201ENST00000293861 SMIM13P0DJ93 91 aa15.11■□□□□ 0.01
SNRNP25-201ENST00000293861 SPANXB1Q9NS25 103 aaPredicted RBP15.11■□□□□ 0.01
SNRNP25-201ENST00000293861 UBE2L6O14933 153 aa15.1■□□□□ 0.01
SNRNP25-201ENST00000293861 OR5A1Q8NGJ0 315 aa15.1■□□□□ 0.01
SNRNP25-201ENST00000293861 GEMIN7Q9H840 131 aaKnown RBP15.1■□□□□ 0.01
SNRNP25-201ENST00000293861 PRO0255Q9UI72 69 aa15.1■□□□□ 0.01
SNRNP25-201ENST00000293861 TRBV6-8A0A0A6YYG3 113 aa15.09■□□□□ 0.01
SNRNP25-201ENST00000293861 IGHV1-58A0A0C4DH39 117 aa15.09■□□□□ 0.01
SNRNP25-201ENST00000293861 IGHV3-30-3P0DP02 117 aa15.09■□□□□ 0.01
SNRNP25-201ENST00000293861 UBE2V1Q13404 147 aa15.09■□□□□ 0.01
SNRNP25-201ENST00000293861 VAMP3Q15836 100 aa15.08■□□□□ 0
SNRNP25-201ENST00000293861 AMMECR1LQ6DCA0 310 aa15.08■□□□□ 0
SNRNP25-201ENST00000293861 HERVK_113P63121 156 aa15.07■□□□□ 0
SNRNP25-201ENST00000293861 TMEM101Q96IK0 257 aa15.07■□□□□ 0
SNRNP25-201ENST00000293861 IGHV3-64A0A075B6Q5 118 aa15.07■□□□□ 0
SNRNP25-201ENST00000293861 VSIG2Q96IQ7 327 aa15.07■□□□□ 0
SNRNP25-201ENST00000293861 NHP2Q9NX24 153 aaKnown RBP15.07■□□□□ 0
SNRNP25-201ENST00000293861 LINC00242Q5T6M2 205 aa15.06■□□□□ 0
SNRNP25-201ENST00000293861 STAB1Q9NY15 2570 aa15.06■□□□□ 0
SNRNP25-201ENST00000293861 A0A1B0GWB2 263 aa15.05■□□□□ 0
SNRNP25-201ENST00000293861 DEFB4AO15263 64 aa15.05■□□□□ 0
SNRNP25-201ENST00000293861 GYPEP15421 78 aa15.05■□□□□ 0
SNRNP25-201ENST00000293861 DAD1P61803 113 aa15.05■□□□□ 0
SNRNP25-201ENST00000293861 SRSF9Q13242 221 aaKnown RBP eCLIP15.05■□□□□ 0
SNRNP25-201ENST00000293861 TRAV8-3A0A0A6YYJ7 113 aa15.05■□□□□ -0
SNRNP25-201ENST00000293861 ATP6V0E2Q8NHE4 81 aa15.05■□□□□ -0
SNRNP25-201ENST00000293861 CDKN2A-AS1Q9UH64 79 aa15.05■□□□□ -0
SNRNP25-201ENST00000293861 RAB37Q96AX2 223 aa15.04■□□□□ -0
SNRNP25-201ENST00000293861 CCL25O15444 150 aa15.04■□□□□ -0
SNRNP25-201ENST00000293861 SPART-AS1P0CW21 52 aa15.04■□□□□ -0
SNRNP25-201ENST00000293861 C12orf74Q32Q52 190 aa15.04■□□□□ -0
SNRNP25-201ENST00000293861 H3BUT2 72 aa15.03■□□□□ -0
SNRNP25-201ENST00000293861 COX6A2Q02221 97 aa15.03■□□□□ -0
SNRNP25-201ENST00000293861 TMEM238LA0A1B0GVL6 79 aa15.02■□□□□ -0
SNRNP25-201ENST00000293861 A6NJY4 79 aa15.02■□□□□ -0
SNRNP25-201ENST00000293861 SPINK8P0C7L1 97 aa15.02■□□□□ -0
SNRNP25-201ENST00000293861 PAX4O43316 350 aa15.02□□□□□ -0.01
SNRNP25-201ENST00000293861 C10orf126Q8N4M7 172 aa15.02□□□□□ -0.01
SNRNP25-201ENST00000293861 CELA1Q9UNI1 258 aa15.02□□□□□ -0.01
SNRNP25-201ENST00000293861 NBEAL2Q6ZNJ1 2754 aa15.01□□□□□ -0.01
SNRNP25-201ENST00000293861 TEX48A0A1B0GUV7 120 aa15.01□□□□□ -0.01
SNRNP25-201ENST00000293861 K7ERJ3 54 aa15.01□□□□□ -0.01
SNRNP25-201ENST00000293861 IGHV3-30P01768 117 aa15.01□□□□□ -0.01
SNRNP25-201ENST00000293861 ATP5G1P05496 136 aa15.01□□□□□ -0.01
SNRNP25-201ENST00000293861 IGHV3-30-5P0DP03 117 aa15.01□□□□□ -0.01
SNRNP25-201ENST00000293861 GAGE6Q13070 117 aa15.01□□□□□ -0.01
SNRNP25-201ENST00000293861 TRAV13-1A0A0B4J241 112 aa15□□□□□ -0.01
SNRNP25-201ENST00000293861 A0A0J9YXY3 114 aa15□□□□□ -0.01
SNRNP25-201ENST00000293861 ZFAND6Q6FIF0 208 aa15□□□□□ -0.01
SNRNP25-201ENST00000293861 CHCHD5Q9BSY4 110 aa15□□□□□ -0.01
SNRNP25-201ENST00000293861 IGLV5-39A0A0G2JS06 123 aa14.99□□□□□ -0.01
SNRNP25-201ENST00000293861 NDUFA12Q9UI09 145 aa14.99□□□□□ -0.01
SNRNP25-201ENST00000293861 A0A1W2PPM0 123 aa14.98□□□□□ -0.01
SNRNP25-201ENST00000293861 G3V4G9 280 aa14.98□□□□□ -0.01
SNRNP25-201ENST00000293861 TMEM238C9JI98 176 aa14.98□□□□□ -0.01
SNRNP25-201ENST00000293861 SAMD5Q5TGI4 173 aa14.97□□□□□ -0.01
SNRNP25-201ENST00000293861 IGLV4-60A0A075B6I1 120 aa14.96□□□□□ -0.01
SNRNP25-201ENST00000293861 NAA38Q9BRA0 125 aaKnown RBP14.96□□□□□ -0.01
SNRNP25-201ENST00000293861 TRAV26-1A0A087WT03 109 aa14.95□□□□□ -0.02
SNRNP25-201ENST00000293861 A0A1B0GUV1 79 aa14.95□□□□□ -0.02
SNRNP25-201ENST00000293861 SMIM1B2RUZ4 78 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms