RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 SMAGPQ0VAQ4 97 aa16.43■□□□□ 0.22
PDF-201ENST00000288022 TMEM18Q96B42 140 aa16.43■□□□□ 0.22
PDF-201ENST00000288022 PRSS1P07477 247 aa16.42■□□□□ 0.22
PDF-201ENST00000288022 CHCHD10Q8WYQ3 142 aaPredicted RBP16.42■□□□□ 0.22
PDF-201ENST00000288022 ZNF664Q8N3J9 261 aa16.41■□□□□ 0.22
PDF-201ENST00000288022 CDC42SE2Q9NRR3 84 aa16.41■□□□□ 0.22
PDF-201ENST00000288022 S100PP25815 95 aa16.4■□□□□ 0.22
PDF-201ENST00000288022 HAMPP81172 84 aa16.4■□□□□ 0.22
PDF-201ENST00000288022 C10orf91Q5T1B1 145 aa16.4■□□□□ 0.22
PDF-201ENST00000288022 UBE2D4Q9Y2X8 147 aa16.4■□□□□ 0.22
PDF-201ENST00000288022 APOBP04114 4563 aaKnown RBP16.4■□□□□ 0.22
PDF-201ENST00000288022 Q8N1X5 172 aa16.39■□□□□ 0.21
PDF-201ENST00000288022 CLRN3Q8NCR9 226 aa16.39■□□□□ 0.21
PDF-201ENST00000288022 LAMTOR2Q9Y2Q5 125 aa16.39■□□□□ 0.21
PDF-201ENST00000288022 CARHSP1Q9Y2V2 147 aaKnown RBP16.39■□□□□ 0.21
PDF-201ENST00000288022 HSPG2P98160 4391 aa16.39■□□□□ 0.21
PDF-201ENST00000288022 TRAV9-1A0A075B6T8 112 aa16.38■□□□□ 0.21
PDF-201ENST00000288022 LINC00959A0A1B0GUT2 108 aa16.38■□□□□ 0.21
PDF-201ENST00000288022 hDV102S1A0JD36 115 aa16.38■□□□□ 0.21
PDF-201ENST00000288022 RAB5AP20339 215 aa16.38■□□□□ 0.21
PDF-201ENST00000288022 KRTAP17-1Q9BYP8 105 aa16.38■□□□□ 0.21
PDF-201ENST00000288022 FAM30AQ9NZY2 134 aa16.38■□□□□ 0.21
PDF-201ENST00000288022 LOC389332A0A1B0GUA5 103 aa16.37■□□□□ 0.21
PDF-201ENST00000288022 XCL1P47992 114 aa16.37■□□□□ 0.21
PDF-201ENST00000288022 SS18Q15532 418 aa16.37■□□□□ 0.21
PDF-201ENST00000288022 MAP1LC3AQ9H492 121 aa16.37■□□□□ 0.21
PDF-201ENST00000288022 CSDC2Q9Y534 153 aaKnown RBP16.37■□□□□ 0.21
PDF-201ENST00000288022 RHEBQ15382 184 aa16.36■□□□□ 0.21
PDF-201ENST00000288022 RPS10P5Q9NQ39 176 aa16.36■□□□□ 0.21
PDF-201ENST00000288022 CCL25O15444 150 aa16.35■□□□□ 0.21
PDF-201ENST00000288022 RPL39P62891 51 aaKnown RBP16.35■□□□□ 0.21
PDF-201ENST00000288022 RNASE13Q5GAN3 156 aaKnown RBP16.35■□□□□ 0.21
PDF-201ENST00000288022 CFAP161Q6P656 301 aa16.35■□□□□ 0.21
PDF-201ENST00000288022 TIMM21Q9BVV7 248 aa16.35■□□□□ 0.21
PDF-201ENST00000288022 KRTAP4-5Q9BYR2 181 aa16.34■□□□□ 0.21
PDF-201ENST00000288022 AP5S1Q9NUS5 200 aa16.34■□□□□ 0.21
PDF-201ENST00000288022 Q6ZUT4 128 aa16.33■□□□□ 0.2
PDF-201ENST00000288022 PRSS47A8MTI9 375 aa16.32■□□□□ 0.2
PDF-201ENST00000288022 FOXI1Q12951 378 aa16.32■□□□□ 0.2
PDF-201ENST00000288022 Q6ZSA8 131 aa16.31■□□□□ 0.2
PDF-201ENST00000288022 C15orf56Q8N910 161 aa16.31■□□□□ 0.2
PDF-201ENST00000288022 SPANXA1Q9NS26 97 aa16.31■□□□□ 0.2
PDF-201ENST00000288022 APOC3P02656 99 aa16.3■□□□□ 0.2
PDF-201ENST00000288022 SMR3BP02814 79 aaPredicted RBP16.3■□□□□ 0.2
PDF-201ENST00000288022 NDUFA5Q16718 116 aa16.3■□□□□ 0.2
PDF-201ENST00000288022 KIAA1644Q3SXP7 199 aa16.3■□□□□ 0.2
PDF-201ENST00000288022 TRAV13-1A0A0B4J241 112 aa16.29■□□□□ 0.2
PDF-201ENST00000288022 HIGD2BQ4VC39 106 aa16.29■□□□□ 0.2
PDF-201ENST00000288022 Q8N8P6 123 aa16.29■□□□□ 0.2
PDF-201ENST00000288022 C1orf196B1AJZ1 125 aa16.28■□□□□ 0.2
PDF-201ENST00000288022 EPM2AB3EWF7 344 aa16.28■□□□□ 0.2
PDF-201ENST00000288022 CD164L2Q6UWJ8 174 aa16.28■□□□□ 0.2
PDF-201ENST00000288022 C9orf163Q8N9P6 203 aa16.28■□□□□ 0.2
PDF-201ENST00000288022 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.27■□□□□ 0.2
PDF-201ENST00000288022 CNBPP62633 177 aaKnown RBP16.27■□□□□ 0.2
PDF-201ENST00000288022 GNB1LQ9BYB4 327 aa16.27■□□□□ 0.2
PDF-201ENST00000288022 OPRPNQ99935 248 aaPredicted RBP16.26■□□□□ 0.19
PDF-201ENST00000288022 IFI27P40305 119 aaPredicted RBP16.25■□□□□ 0.19
PDF-201ENST00000288022 COX19Q49B96 90 aa16.25■□□□□ 0.19
PDF-201ENST00000288022 SVBPQ8N300 66 aa16.25■□□□□ 0.19
PDF-201ENST00000288022 NXT2Q9NPJ8 142 aaKnown RBP16.25■□□□□ 0.19
PDF-201ENST00000288022 SNAPINO95295 136 aa16.24■□□□□ 0.19
PDF-201ENST00000288022 MRPS36P82909 103 aaKnown RBP16.24■□□□□ 0.19
PDF-201ENST00000288022 GVQW2A0A096LPI5 108 aaPredicted RBP16.23■□□□□ 0.19
PDF-201ENST00000288022 IGHV1-58A0A0C4DH39 117 aa16.23■□□□□ 0.19
PDF-201ENST00000288022 SLPIP03973 132 aa16.23■□□□□ 0.19
PDF-201ENST00000288022 ORMDL2Q53FV1 153 aa16.23■□□□□ 0.19
PDF-201ENST00000288022 Q5VSD8 79 aa16.23■□□□□ 0.19
PDF-201ENST00000288022 SCXQ7RTU7 201 aa16.23■□□□□ 0.19
PDF-201ENST00000288022 MALP21145 153 aa16.22■□□□□ 0.19
PDF-201ENST00000288022 CHAC1Q9BUX1 264 aa16.22■□□□□ 0.19
PDF-201ENST00000288022 CYSLTR1Q9Y271 337 aa16.22■□□□□ 0.19
PDF-201ENST00000288022 IGHV3-64A0A075B6Q5 118 aa16.21■□□□□ 0.19
PDF-201ENST00000288022 IFITM10A6NMD0 228 aa16.21■□□□□ 0.19
PDF-201ENST00000288022 COX7A2LO14548 114 aa16.21■□□□□ 0.19
PDF-201ENST00000288022 MT-ND6P03923 174 aa16.21■□□□□ 0.19
PDF-201ENST00000288022 FAM104AQ969W3 186 aa16.21■□□□□ 0.19
PDF-201ENST00000288022 FAM229AH3BQW9 127 aa16.2■□□□□ 0.18
PDF-201ENST00000288022 K7EMI3 77 aa16.2■□□□□ 0.18
PDF-201ENST00000288022 C2orf66Q6UXQ4 117 aa16.2■□□□□ 0.18
PDF-201ENST00000288022 MRPL18Q9H0U6 180 aaKnown RBP16.2■□□□□ 0.18
PDF-201ENST00000288022 PYGO1Q9Y3Y4 419 aa16.2■□□□□ 0.18
PDF-201ENST00000288022 PCLOQ9Y6V0 5065 aa16.19■□□□□ 0.18
PDF-201ENST00000288022 FABP9Q0Z7S8 132 aa16.19■□□□□ 0.18
PDF-201ENST00000288022 SDIM1Q6ZPB5 146 aa16.19■□□□□ 0.18
PDF-201ENST00000288022 TGIF2-C20orf24A0A0A6YYL0 155 aa16.18■□□□□ 0.18
PDF-201ENST00000288022 PRSS3P2Q8NHM4 247 aa16.18■□□□□ 0.18
PDF-201ENST00000288022 IGLV4-3A0A075B6K6 122 aa16.17■□□□□ 0.18
PDF-201ENST00000288022 ZNF561-AS1K7EIQ3 104 aa16.17■□□□□ 0.18
PDF-201ENST00000288022 C5orf38Q86SI9 138 aa16.17■□□□□ 0.18
PDF-201ENST00000288022 CIRBP-AS1Q8TBR5 109 aa16.17■□□□□ 0.18
PDF-201ENST00000288022 LINC00526Q96FQ7 95 aa16.17■□□□□ 0.18
PDF-201ENST00000288022 TMEM141Q96I45 108 aa16.17■□□□□ 0.18
PDF-201ENST00000288022 ALKBH7Q9BT30 221 aaPredicted RBP16.17■□□□□ 0.18
PDF-201ENST00000288022 DNAH8Q96JB1 4490 aa16.15■□□□□ 0.18
PDF-201ENST00000288022 G0S2P27469 103 aa16.14■□□□□ 0.17
PDF-201ENST00000288022 Q6ZN92 141 aa16.14■□□□□ 0.17
PDF-201ENST00000288022 TEX43Q6ZNM6 134 aa16.14■□□□□ 0.17
PDF-201ENST00000288022 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.14■□□□□ 0.17
PDF-201ENST00000288022 ABCA13Q86UQ4 5058 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms