RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 ADAMTSL4-AS1Q5T5F5 129 aa13.8□□□□□ -0.2
CPNE7-201ENST00000268720 Q6ZUT4 128 aa13.8□□□□□ -0.2
CPNE7-201ENST00000268720 LINC00467Q9BRT7 94 aa13.8□□□□□ -0.2
CPNE7-201ENST00000268720 CIDEAO60543 219 aa13.8□□□□□ -0.2
CPNE7-201ENST00000268720 SLC25A20O43772 301 aa13.78□□□□□ -0.2
CPNE7-201ENST00000268720 ODF3L2Q3SX64 289 aa13.78□□□□□ -0.2
CPNE7-201ENST00000268720 TIMM21Q9BVV7 248 aa13.78□□□□□ -0.2
CPNE7-201ENST00000268720 HECTD1Q9ULT8 2610 aa13.78□□□□□ -0.2
CPNE7-201ENST00000268720 A0A1B0GV72 72 aa13.77□□□□□ -0.2
CPNE7-201ENST00000268720 M0R2P5 195 aa13.77□□□□□ -0.2
CPNE7-201ENST00000268720 UNC79Q9P2D8 2635 aa13.77□□□□□ -0.2
CPNE7-201ENST00000268720 FASNP49327 2511 aaKnown RBP13.77□□□□□ -0.2
CPNE7-201ENST00000268720 CRYBA4P53673 196 aa13.77□□□□□ -0.21
CPNE7-201ENST00000268720 SBSPONQ8IVN8 264 aa13.77□□□□□ -0.21
CPNE7-201ENST00000268720 C11orf72Q8NBR9 251 aa13.77□□□□□ -0.21
CPNE7-201ENST00000268720 ANK3Q12955 4377 aaKnown RBP13.77□□□□□ -0.21
CPNE7-201ENST00000268720 TMEM86BQ8N661 226 aa13.77□□□□□ -0.21
CPNE7-201ENST00000268720 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.76□□□□□ -0.21
CPNE7-201ENST00000268720 ZNF415Q09FC8 603 aa13.75□□□□□ -0.21
CPNE7-201ENST00000268720 LITAFQ99732 161 aa13.75□□□□□ -0.21
CPNE7-201ENST00000268720 CITED2Q99967 270 aaPredicted RBP13.75□□□□□ -0.21
CPNE7-201ENST00000268720 KRTAP1-1Q07627 177 aa13.74□□□□□ -0.21
CPNE7-201ENST00000268720 CCL24O00175 119 aa13.74□□□□□ -0.21
CPNE7-201ENST00000268720 TRGV1A0A0A0MS02 117 aa13.73□□□□□ -0.21
CPNE7-201ENST00000268720 A0A0B4J2C4 111 aa13.73□□□□□ -0.21
CPNE7-201ENST00000268720 CHCHD7Q9BUK0 85 aa13.73□□□□□ -0.21
CPNE7-201ENST00000268720 NDUFA12Q9UI09 145 aa13.73□□□□□ -0.21
CPNE7-201ENST00000268720 TRIAP1O43715 76 aa13.73□□□□□ -0.21
CPNE7-201ENST00000268720 LINC00694P0DN24 101 aa13.73□□□□□ -0.21
CPNE7-201ENST00000268720 MRPS36P82909 103 aaKnown RBP13.73□□□□□ -0.21
CPNE7-201ENST00000268720 NTN5Q8WTR8 489 aaPredicted RBP13.72□□□□□ -0.21
CPNE7-201ENST00000268720 EDA2RQ9HAV5 297 aa13.72□□□□□ -0.21
CPNE7-201ENST00000268720 INSP01308 110 aa13.72□□□□□ -0.21
CPNE7-201ENST00000268720 COX6A2Q02221 97 aa13.72□□□□□ -0.21
CPNE7-201ENST00000268720 GEMIN7Q9H840 131 aaKnown RBP13.72□□□□□ -0.21
CPNE7-201ENST00000268720 CDKN2A-AS1Q9UH64 79 aa13.72□□□□□ -0.21
CPNE7-201ENST00000268720 IGKV3OR2-268A0A0C4DH90 116 aa13.71□□□□□ -0.21
CPNE7-201ENST00000268720 PYGO1Q9Y3Y4 419 aa13.71□□□□□ -0.22
CPNE7-201ENST00000268720 IGHV1-58A0A0C4DH39 117 aa13.7□□□□□ -0.22
CPNE7-201ENST00000268720 C1orf158Q8N1D5 194 aa13.7□□□□□ -0.22
CPNE7-201ENST00000268720 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.7□□□□□ -0.22
CPNE7-201ENST00000268720 TRAV13-1A0A0B4J241 112 aa13.7□□□□□ -0.22
CPNE7-201ENST00000268720 STHQ8IWL8 128 aa13.7□□□□□ -0.22
CPNE7-201ENST00000268720 LINC01006Q8NI28 216 aa13.7□□□□□ -0.22
CPNE7-201ENST00000268720 UBE2D4Q9Y2X8 147 aa13.7□□□□□ -0.22
CPNE7-201ENST00000268720 TEX49A0A1B0GTD5 131 aa13.69□□□□□ -0.22
CPNE7-201ENST00000268720 LINC01620Q4KN68 170 aa13.69□□□□□ -0.22
CPNE7-201ENST00000268720 Q6ZTI0 123 aa13.69□□□□□ -0.22
CPNE7-201ENST00000268720 CLEC2BQ92478 149 aa13.69□□□□□ -0.22
CPNE7-201ENST00000268720 YAE1D1Q9NRH1 226 aa13.69□□□□□ -0.22
CPNE7-201ENST00000268720 VSIG2Q96IQ7 327 aa13.68□□□□□ -0.22
CPNE7-201ENST00000268720 TRAV26-1A0A087WT03 109 aa13.68□□□□□ -0.22
CPNE7-201ENST00000268720 ATXN8Q156A1 80 aa13.67□□□□□ -0.22
CPNE7-201ENST00000268720 TRRAPQ9Y4A5 3859 aa13.67□□□□□ -0.22
CPNE7-201ENST00000268720 LOC100131303A0A0U1RQF7 123 aa13.67□□□□□ -0.22
CPNE7-201ENST00000268720 RPL35AP18077 110 aaKnown RBP13.67□□□□□ -0.22
CPNE7-201ENST00000268720 BEAN1Q3B7T3 259 aa13.67□□□□□ -0.22
CPNE7-201ENST00000268720 PIK3CD-AS1Q5SR53 167 aa13.67□□□□□ -0.22
CPNE7-201ENST00000268720 DGAT2L7PQ6IED9 249 aa13.66□□□□□ -0.22
CPNE7-201ENST00000268720 TENM1Q9UKZ4 2725 aa13.66□□□□□ -0.22
CPNE7-201ENST00000268720 GAGE12JA6NER3 117 aa13.66□□□□□ -0.22
CPNE7-201ENST00000268720 GAGE4Q13068 117 aa13.66□□□□□ -0.22
CPNE7-201ENST00000268720 GAGE5Q13069 117 aa13.66□□□□□ -0.22
CPNE7-201ENST00000268720 CLUHP3Q96NS8 147 aa13.66□□□□□ -0.22
CPNE7-201ENST00000268720 TINCRA0A1B0GVN0 87 aa13.65□□□□□ -0.22
CPNE7-201ENST00000268720 ICOSQ9Y6W8 199 aa13.65□□□□□ -0.22
CPNE7-201ENST00000268720 TRAV25A0A0B4J276 109 aa13.64□□□□□ -0.23
CPNE7-201ENST00000268720 TEX29Q8N6K0 151 aa13.64□□□□□ -0.23
CPNE7-201ENST00000268720 RS1O15537 224 aa13.64□□□□□ -0.23
CPNE7-201ENST00000268720 MIAQ16674 131 aa13.64□□□□□ -0.23
CPNE7-201ENST00000268720 NOP10Q9NPE3 64 aaKnown RBP13.64□□□□□ -0.23
CPNE7-201ENST00000268720 KMT2BQ9UMN6 2715 aaPredicted RBP13.63□□□□□ -0.23
CPNE7-201ENST00000268720 CRLF1O75462 422 aa13.63□□□□□ -0.23
CPNE7-201ENST00000268720 RNF183Q96D59 192 aa13.63□□□□□ -0.23
CPNE7-201ENST00000268720 TRBV30A0A0K0K1B3 111 aa13.63□□□□□ -0.23
CPNE7-201ENST00000268720 SPANXA1Q9NS26 97 aa13.62□□□□□ -0.23
CPNE7-201ENST00000268720 OTOGQ6ZRI0 2925 aa13.61□□□□□ -0.23
CPNE7-201ENST00000268720 SMR3AQ99954 134 aa13.61□□□□□ -0.23
CPNE7-201ENST00000268720 SPANXDQ9BXN6 97 aa13.61□□□□□ -0.23
CPNE7-201ENST00000268720 SPANXCQ9NY87 97 aa13.61□□□□□ -0.23
CPNE7-201ENST00000268720 H7C423 109 aa13.6□□□□□ -0.23
CPNE7-201ENST00000268720 GIG44P09565 113 aaPredicted RBP13.6□□□□□ -0.23
CPNE7-201ENST00000268720 C2orf82Q6UX34 121 aa13.6□□□□□ -0.23
CPNE7-201ENST00000268720 TMEM101Q96IK0 257 aa13.6□□□□□ -0.23
CPNE7-201ENST00000268720 TRBV10-2A0A0K0K1G8 114 aa13.6□□□□□ -0.23
CPNE7-201ENST00000268720 RNASE1P07998 156 aaKnown RBP13.6□□□□□ -0.23
CPNE7-201ENST00000268720 RPL13AP40429 203 aaKnown RBP13.6□□□□□ -0.23
CPNE7-201ENST00000268720 NTM-AS1Q6ZSK4 140 aa13.6□□□□□ -0.23
CPNE7-201ENST00000268720 IL17DQ8TAD2 202 aa13.6□□□□□ -0.23
CPNE7-201ENST00000268720 TRAV4A0A0B4J268 109 aa13.59□□□□□ -0.23
CPNE7-201ENST00000268720 TMEM262E9PQX1 116 aa13.59□□□□□ -0.23
CPNE7-201ENST00000268720 ZFAND6Q6FIF0 208 aa13.59□□□□□ -0.23
CPNE7-201ENST00000268720 Q9H8V8 135 aa13.59□□□□□ -0.23
CPNE7-201ENST00000268720 GAGE7O76087 117 aa13.59□□□□□ -0.23
CPNE7-201ENST00000268720 GAGE12FP0CL80 117 aa13.59□□□□□ -0.23
CPNE7-201ENST00000268720 GAGE12GP0CL81 117 aa13.59□□□□□ -0.23
CPNE7-201ENST00000268720 GAGE12IP0CL82 117 aa13.59□□□□□ -0.23
CPNE7-201ENST00000268720 DNAJC30Q96LL9 226 aa13.57□□□□□ -0.24
CPNE7-201ENST00000268720 UBE2WQ96B02 151 aa13.57□□□□□ -0.24
CPNE7-201ENST00000268720 C16orf95Q9H693 158 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms