RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TRAV26-1A0A087WT03 109 aa11.4□□□□□ -0.58
TPM1-201ENST00000267996 SMAGPQ0VAQ4 97 aa11.4□□□□□ -0.58
TPM1-201ENST00000267996 Q6ZUT4 128 aa11.4□□□□□ -0.58
TPM1-201ENST00000267996 A0A0J9YY99 117 aa11.4□□□□□ -0.59
TPM1-201ENST00000267996 DEFB121Q5J5C9 76 aa11.4□□□□□ -0.59
TPM1-201ENST00000267996 SLC25A34Q6PIV7 304 aa11.4□□□□□ -0.59
TPM1-201ENST00000267996 A0A0J9YWU9 116 aa11.39□□□□□ -0.59
TPM1-201ENST00000267996 IGKV2D-26A0A0A0MRZ7 120 aa11.38□□□□□ -0.59
TPM1-201ENST00000267996 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
TPM1-201ENST00000267996 DLEU1O43261 78 aa11.37□□□□□ -0.59
TPM1-201ENST00000267996 HTN3P15516 51 aa11.37□□□□□ -0.59
TPM1-201ENST00000267996 DEFA6Q01524 100 aa11.37□□□□□ -0.59
TPM1-201ENST00000267996 BOD1L2Q8IYS8 172 aa11.37□□□□□ -0.59
TPM1-201ENST00000267996 UBE2L6O14933 153 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 ZNF25P17030 456 aaPredicted RBP11.36□□□□□ -0.59
TPM1-201ENST00000267996 RNASE13Q5GAN3 156 aaKnown RBP11.36□□□□□ -0.59
TPM1-201ENST00000267996 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 DNAH9Q9NYC9 4486 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 A0A0J9YXV3 536 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 H3BNG1 76 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 HNRNPA3P51991 378 aaKnown RBP11.36□□□□□ -0.59
TPM1-201ENST00000267996 TCTAP57738 103 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 MRPL23Q16540 153 aaKnown RBP11.36□□□□□ -0.59
TPM1-201ENST00000267996 Q6ZTC4 211 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 SH2D6Q7Z4S9 175 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 OR5A1Q8NGJ0 315 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 C2orf88Q9BSF0 95 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 TP73-AS1Q9UF72 201 aa11.36□□□□□ -0.59
TPM1-201ENST00000267996 MRPS16Q9Y3D3 137 aaKnown RBP11.36□□□□□ -0.59
TPM1-201ENST00000267996 E9PLD3 99 aa11.35□□□□□ -0.59
TPM1-201ENST00000267996 NMUP48645 174 aa11.35□□□□□ -0.59
TPM1-201ENST00000267996 UBE2D1P51668 147 aa11.35□□□□□ -0.59
TPM1-201ENST00000267996 PCP2Q8IVA1 136 aa11.35□□□□□ -0.59
TPM1-201ENST00000267996 MRAPQ8TCY5 172 aa11.35□□□□□ -0.59
TPM1-201ENST00000267996 GAGE6Q13070 117 aa11.34□□□□□ -0.59
TPM1-201ENST00000267996 AMMECR1LQ6DCA0 310 aa11.34□□□□□ -0.59
TPM1-201ENST00000267996 CHCHD5Q9BSY4 110 aa11.34□□□□□ -0.59
TPM1-201ENST00000267996 ICOSQ9Y6W8 199 aa11.34□□□□□ -0.59
TPM1-201ENST00000267996 A0A096LPF7 62 aa11.33□□□□□ -0.6
TPM1-201ENST00000267996 TINCRA0A1B0GVN0 87 aa11.33□□□□□ -0.6
TPM1-201ENST00000267996 ZNF22P17026 224 aaPredicted RBP11.33□□□□□ -0.6
TPM1-201ENST00000267996 FAM19A3Q7Z5A8 133 aa11.33□□□□□ -0.6
TPM1-201ENST00000267996 C11orf45Q8TAV5 145 aa11.33□□□□□ -0.6
TPM1-201ENST00000267996 TMEM101Q96IK0 257 aa11.33□□□□□ -0.6
TPM1-201ENST00000267996 CTAG1AP78358 180 aa11.33□□□□□ -0.6
TPM1-201ENST00000267996 KRTAP21-3Q3LHN1 58 aa11.33□□□□□ -0.6
TPM1-201ENST00000267996 NANOS2P60321 138 aaKnown RBP11.32□□□□□ -0.6
TPM1-201ENST00000267996 HERVK_113P61574 105 aa11.32□□□□□ -0.6
TPM1-201ENST00000267996 TMEM170BQ5T4T1 132 aa11.32□□□□□ -0.6
TPM1-201ENST00000267996 C2orf91Q6ZV80 131 aa11.32□□□□□ -0.6
TPM1-201ENST00000267996 TIRAPP58753 221 aa11.31□□□□□ -0.6
TPM1-201ENST00000267996 DNHD1Q96M86 4753 aa11.3□□□□□ -0.6
TPM1-201ENST00000267996 A0A1B0GUV1 79 aa11.3□□□□□ -0.6
TPM1-201ENST00000267996 TMEM223A0PJW6 202 aa11.3□□□□□ -0.6
TPM1-201ENST00000267996 SIVA1O15304 175 aa11.3□□□□□ -0.6
TPM1-201ENST00000267996 IGLV4-60A0A075B6I1 120 aa11.3□□□□□ -0.6
TPM1-201ENST00000267996 IGLV5-45A0A087WSX0 123 aa11.3□□□□□ -0.6
TPM1-201ENST00000267996 TTTY13Q9BZ97 58 aa11.3□□□□□ -0.6
TPM1-201ENST00000267996 MAPKAPK5-AS1Q8N8E1 139 aa11.29□□□□□ -0.6
TPM1-201ENST00000267996 SNHG12Q9BXW3 62 aa11.29□□□□□ -0.6
TPM1-201ENST00000267996 LINC00242Q5T6M2 205 aa11.28□□□□□ -0.6
TPM1-201ENST00000267996 LELP1Q5T871 98 aa11.28□□□□□ -0.6
TPM1-201ENST00000267996 DEFB131BA0A096LNP1 70 aa11.27□□□□□ -0.6
TPM1-201ENST00000267996 TRAV8-6A0A0B4J262 113 aa11.27□□□□□ -0.6
TPM1-201ENST00000267996 M0R143 59 aa11.27□□□□□ -0.6
TPM1-201ENST00000267996 RBX1P62877 108 aa11.27□□□□□ -0.6
TPM1-201ENST00000267996 SEC11AP67812 179 aa11.27□□□□□ -0.6
TPM1-201ENST00000267996 B9D2Q9BPU9 175 aa11.27□□□□□ -0.6
TPM1-201ENST00000267996 GEMIN7Q9H840 131 aaKnown RBP11.27□□□□□ -0.6
TPM1-201ENST00000267996 EREGO14944 169 aa11.27□□□□□ -0.61
TPM1-201ENST00000267996 HERVK_113P63121 156 aa11.27□□□□□ -0.61
TPM1-201ENST00000267996 HIGD1BQ9P298 99 aa11.27□□□□□ -0.61
TPM1-201ENST00000267996 TRAV13-1A0A0B4J241 112 aa11.26□□□□□ -0.61
TPM1-201ENST00000267996 COX6A2Q02221 97 aa11.26□□□□□ -0.61
TPM1-201ENST00000267996 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
TPM1-201ENST00000267996 LYPD5Q6UWN5 251 aa11.26□□□□□ -0.61
TPM1-201ENST00000267996 MYMXA0A1B0GTQ4 84 aa11.25□□□□□ -0.61
TPM1-201ENST00000267996 TMEM262E9PQX1 116 aa11.25□□□□□ -0.61
TPM1-201ENST00000267996 LEPROTO15243 131 aa11.25□□□□□ -0.61
TPM1-201ENST00000267996 TSPEAR-AS2P59090 65 aa11.25□□□□□ -0.61
TPM1-201ENST00000267996 LINC00469Q8N7U9 141 aa11.25□□□□□ -0.61
TPM1-201ENST00000267996 CDKN2A-AS1Q9UH64 79 aa11.25□□□□□ -0.61
TPM1-201ENST00000267996 TRAV10A0A0B4J240 114 aa11.24□□□□□ -0.61
TPM1-201ENST00000267996 J3QQQ9 107 aa11.24□□□□□ -0.61
TPM1-201ENST00000267996 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
TPM1-201ENST00000267996 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
TPM1-201ENST00000267996 H3BRM9 83 aa11.23□□□□□ -0.61
TPM1-201ENST00000267996 LBHQ53QV2 105 aaPredicted RBP11.22□□□□□ -0.61
TPM1-201ENST00000267996 ZNF815PA8K554 130 aa11.21□□□□□ -0.61
TPM1-201ENST00000267996 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.61
TPM1-201ENST00000267996 TRAV8-3A0A0A6YYJ7 113 aa11.2□□□□□ -0.62
TPM1-201ENST00000267996 LINC00959A0A1B0GUT2 108 aa11.2□□□□□ -0.62
TPM1-201ENST00000267996 HINT1P49773 126 aaPredicted RBP11.2□□□□□ -0.62
TPM1-201ENST00000267996 IGHV3-64A0A075B6Q5 118 aa11.2□□□□□ -0.62
TPM1-201ENST00000267996 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
TPM1-201ENST00000267996 SPINK8P0C7L1 97 aa11.2□□□□□ -0.62
TPM1-201ENST00000267996 LGALS3P17931 250 aaKnown RBP11.2□□□□□ -0.62
TPM1-201ENST00000267996 HSD52Q0P140 79 aa11.19□□□□□ -0.62
TPM1-201ENST00000267996 BVES-AS1Q5T3Y7 98 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms