RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 IBA57-AS1B1ANH7 110 aa10.67□□□□□ -0.7
CUX2-201ENST00000261726 CACNA1HO95180 2353 aa10.67□□□□□ -0.7
CUX2-201ENST00000261726 C19orf84I3L1E1 186 aa10.67□□□□□ -0.7
CUX2-201ENST00000261726 GDF5OSQ5U4N7 250 aa10.67□□□□□ -0.7
CUX2-201ENST00000261726 BBC3Q96PG8 261 aaPredicted RBP10.67□□□□□ -0.7
CUX2-201ENST00000261726 A8MZ25 164 aa10.66□□□□□ -0.7
CUX2-201ENST00000261726 TMEM131Q92545 1883 aa10.66□□□□□ -0.7
CUX2-201ENST00000261726 ODF3Q96PU9 254 aa10.66□□□□□ -0.7
CUX2-201ENST00000261726 Q6ZSR3 168 aa10.65□□□□□ -0.7
CUX2-201ENST00000261726 A0A1B0GXF2 115 aa10.65□□□□□ -0.7
CUX2-201ENST00000261726 K7EQG2 157 aa10.65□□□□□ -0.7
CUX2-201ENST00000261726 ATP5EP2Q5VTU8 51 aa10.65□□□□□ -0.7
CUX2-201ENST00000261726 FAM30AQ9NZY2 134 aa10.65□□□□□ -0.7
CUX2-201ENST00000261726 ODF3BA8MYP8 253 aa10.64□□□□□ -0.71
CUX2-201ENST00000261726 Q8N9L7 120 aa10.64□□□□□ -0.71
CUX2-201ENST00000261726 TRBV6-5A0A0K0K1A5 114 aa10.64□□□□□ -0.71
CUX2-201ENST00000261726 LMO4P61968 165 aa10.64□□□□□ -0.71
CUX2-201ENST00000261726 MED13LQ71F56 2210 aa10.63□□□□□ -0.71
CUX2-201ENST00000261726 A0A1W2PNU3 283 aaPredicted RBP10.63□□□□□ -0.71
CUX2-201ENST00000261726 MIFP14174 115 aa10.63□□□□□ -0.71
CUX2-201ENST00000261726 C10orf99Q6UWK7 81 aa10.63□□□□□ -0.71
CUX2-201ENST00000261726 MAPKAPK5-AS1Q8N8E1 139 aa10.63□□□□□ -0.71
CUX2-201ENST00000261726 ZNF706Q9Y5V0 76 aaPredicted RBP10.63□□□□□ -0.71
CUX2-201ENST00000261726 IGLV2-8P01709 118 aa10.63□□□□□ -0.71
CUX2-201ENST00000261726 SPRY4Q9C004 299 aa10.63□□□□□ -0.71
CUX2-201ENST00000261726 UBE2D2P62837 147 aa10.62□□□□□ -0.71
CUX2-201ENST00000261726 Q8NA96 180 aa10.62□□□□□ -0.71
CUX2-201ENST00000261726 V9GYY9 64 aa10.62□□□□□ -0.71
CUX2-201ENST00000261726 TRAV10A0A0B4J240 114 aa10.62□□□□□ -0.71
CUX2-201ENST00000261726 PRO3102Q9H379 93 aa10.62□□□□□ -0.71
CUX2-201ENST00000261726 LOC100131303A0A0U1RQF7 123 aa10.61□□□□□ -0.71
CUX2-201ENST00000261726 C22orf34Q6ZV56 151 aa10.61□□□□□ -0.71
CUX2-201ENST00000261726 Q6ZQY7 126 aa10.61□□□□□ -0.71
CUX2-201ENST00000261726 MRPS12O15235 138 aaKnown RBP10.61□□□□□ -0.71
CUX2-201ENST00000261726 M0QY20 66 aa10.61□□□□□ -0.71
CUX2-201ENST00000261726 GPR179Q6PRD1 2367 aa10.61□□□□□ -0.71
CUX2-201ENST00000261726 FAM19A3Q7Z5A8 133 aa10.61□□□□□ -0.71
CUX2-201ENST00000261726 PLAC8L1A1L4L8 177 aa10.61□□□□□ -0.71
CUX2-201ENST00000261726 TRBV27A0A0K0K1C4 114 aa10.6□□□□□ -0.71
CUX2-201ENST00000261726 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
CUX2-201ENST00000261726 POM121L12Q8N7R1 296 aa10.6□□□□□ -0.71
CUX2-201ENST00000261726 SHISA2Q6UWI4 295 aa10.59□□□□□ -0.71
CUX2-201ENST00000261726 Q6ZSV7 163 aa10.59□□□□□ -0.71
CUX2-201ENST00000261726 LRRC75A-AS1Q8N1F1 130 aa10.59□□□□□ -0.71
CUX2-201ENST00000261726 WFDC10AQ9H1F0 79 aa10.59□□□□□ -0.71
CUX2-201ENST00000261726 DHRS4-AS1Q9P1J3 65 aa10.59□□□□□ -0.71
CUX2-201ENST00000261726 PCDH15Q96QU1 1955 aa10.59□□□□□ -0.71
CUX2-201ENST00000261726 TRBV6-4A0A1B0GX49 114 aa10.59□□□□□ -0.71
CUX2-201ENST00000261726 KPRPQ5T749 579 aaPredicted RBP10.59□□□□□ -0.71
CUX2-201ENST00000261726 M0R378 163 aa10.58□□□□□ -0.71
CUX2-201ENST00000261726 Q6ZVQ6 151 aa10.58□□□□□ -0.71
CUX2-201ENST00000261726 TRBV30A0A0K0K1B3 111 aa10.58□□□□□ -0.72
CUX2-201ENST00000261726 RBX1P62877 108 aa10.58□□□□□ -0.72
CUX2-201ENST00000261726 NCOA6Q14686 2063 aaPredicted RBP10.58□□□□□ -0.72
CUX2-201ENST00000261726 FBXL19-AS1Q494R0 122 aa10.58□□□□□ -0.72
CUX2-201ENST00000261726 HTTP42858 3142 aa10.57□□□□□ -0.72
CUX2-201ENST00000261726 TIMM17BO60830 172 aa10.57□□□□□ -0.72
CUX2-201ENST00000261726 C1orf229Q6ZS94 237 aaPredicted RBP10.57□□□□□ -0.72
CUX2-201ENST00000261726 IGLV4-69A0A075B6H9 119 aa10.57□□□□□ -0.72
CUX2-201ENST00000261726 ATG2AQ2TAZ0 1938 aa10.56□□□□□ -0.72
CUX2-201ENST00000261726 LOC107984640A0A0U1RRK4 108 aa10.56□□□□□ -0.72
CUX2-201ENST00000261726 PRM2P04554 102 aa10.56□□□□□ -0.72
CUX2-201ENST00000261726 RETNLBQ9BQ08 111 aa10.56□□□□□ -0.72
CUX2-201ENST00000261726 C11orf1Q9H5F2 150 aa10.56□□□□□ -0.72
CUX2-201ENST00000261726 CREBBPQ92793 2442 aa10.56□□□□□ -0.72
CUX2-201ENST00000261726 CRIP1P50238 77 aa10.56□□□□□ -0.72
CUX2-201ENST00000261726 X6R8D5 127 aa10.56□□□□□ -0.72
CUX2-201ENST00000261726 LY6G6DO95868 133 aa10.56□□□□□ -0.72
CUX2-201ENST00000261726 CD164L2Q6UWJ8 174 aa10.56□□□□□ -0.72
CUX2-201ENST00000261726 SMIM11BQ8TCY0 68 aa10.55□□□□□ -0.72
CUX2-201ENST00000261726 RNF185Q96GF1 192 aa10.55□□□□□ -0.72
CUX2-201ENST00000261726 PRORYQ9H606 182 aa10.55□□□□□ -0.72
CUX2-201ENST00000261726 ATP5EP56381 51 aaPredicted RBP10.55□□□□□ -0.72
CUX2-201ENST00000261726 C18orf65Q6ZTR6 163 aa10.55□□□□□ -0.72
CUX2-201ENST00000261726 SERP2Q8N6R1 65 aa10.55□□□□□ -0.72
CUX2-201ENST00000261726 PLA2G1BP04054 148 aaKnown RBP10.54□□□□□ -0.72
CUX2-201ENST00000261726 NDUFC1O43677 76 aa10.54□□□□□ -0.72
CUX2-201ENST00000261726 MBD6Q96DN6 1003 aa10.54□□□□□ -0.72
CUX2-201ENST00000261726 CELA1Q9UNI1 258 aa10.54□□□□□ -0.72
CUX2-201ENST00000261726 NANOS2P60321 138 aaKnown RBP10.54□□□□□ -0.72
CUX2-201ENST00000261726 LINC00959A0A1B0GUT2 108 aa10.53□□□□□ -0.72
CUX2-201ENST00000261726 MKI67P46013 3256 aaKnown RBP10.53□□□□□ -0.72
CUX2-201ENST00000261726 LRP4O75096 1905 aa10.53□□□□□ -0.72
CUX2-201ENST00000261726 TSHBP01222 138 aa10.53□□□□□ -0.72
CUX2-201ENST00000261726 NDUFA7O95182 113 aa10.53□□□□□ -0.72
CUX2-201ENST00000261726 P0C879 139 aa10.52□□□□□ -0.72
CUX2-201ENST00000261726 CIRBP-AS1Q8TBR5 109 aa10.52□□□□□ -0.72
CUX2-201ENST00000261726 BRWD1-AS2P59051 145 aa10.52□□□□□ -0.73
CUX2-201ENST00000261726 ESRGQ1W209 222 aa10.52□□□□□ -0.73
CUX2-201ENST00000261726 C10orf25Q5T742 122 aa10.52□□□□□ -0.73
CUX2-201ENST00000261726 LELP1Q5T871 98 aa10.51□□□□□ -0.73
CUX2-201ENST00000261726 TANC2Q9HCD6 1990 aa10.51□□□□□ -0.73
CUX2-201ENST00000261726 ZNF73O43830 326 aaPredicted RBP10.51□□□□□ -0.73
CUX2-201ENST00000261726 CCDC179H3BU77 68 aa10.49□□□□□ -0.73
CUX2-201ENST00000261726 ZNF702PQ9H963 129 aa10.49□□□□□ -0.73
CUX2-201ENST00000261726 U3KQK5 164 aa10.49□□□□□ -0.73
CUX2-201ENST00000261726 PYGO1Q9Y3Y4 419 aa10.48□□□□□ -0.73
CUX2-201ENST00000261726 MED12LQ86YW9 2145 aa10.47□□□□□ -0.73
CUX2-201ENST00000261726 Q6Q795 121 aa10.47□□□□□ -0.73
CUX2-201ENST00000261726 LINC00574Q9H8X3 128 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms