RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 IBA57-AS1B1ANH7 110 aa12.87□□□□□ -0.35
KLF3-201ENST00000261438 NRGNQ92686 78 aa12.87□□□□□ -0.35
KLF3-201ENST00000261438 CRYGDP07320 174 aa12.86□□□□□ -0.35
KLF3-201ENST00000261438 C10orf142B7Z368 130 aa12.86□□□□□ -0.35
KLF3-201ENST00000261438 K7EQG2 157 aa12.86□□□□□ -0.35
KLF3-201ENST00000261438 SCXQ7RTU7 201 aa12.86□□□□□ -0.35
KLF3-201ENST00000261438 NDUFC1O43677 76 aa12.85□□□□□ -0.35
KLF3-201ENST00000261438 PTPRQQ9UMZ3 2332 aa12.85□□□□□ -0.35
KLF3-201ENST00000261438 UBE2D4Q9Y2X8 147 aa12.84□□□□□ -0.35
KLF3-201ENST00000261438 KLLNB2CW77 178 aa12.84□□□□□ -0.35
KLF3-201ENST00000261438 A0A087WVE0 104 aa12.84□□□□□ -0.35
KLF3-201ENST00000261438 ATP5EP56381 51 aaPredicted RBP12.84□□□□□ -0.35
KLF3-201ENST00000261438 CAMK2N2Q96S95 79 aa12.84□□□□□ -0.35
KLF3-201ENST00000261438 FAM208BQ5VWN6 2430 aa12.84□□□□□ -0.35
KLF3-201ENST00000261438 CLPSL1A2RUU4 121 aa12.83□□□□□ -0.35
KLF3-201ENST00000261438 SMIM11BQ8TCY0 68 aa12.83□□□□□ -0.35
KLF3-201ENST00000261438 SMIM26A0A096LP01 95 aa12.83□□□□□ -0.36
KLF3-201ENST00000261438 TRBV7-7A0A0K0K1E9 115 aa12.83□□□□□ -0.36
KLF3-201ENST00000261438 BPY2O14599 106 aa12.83□□□□□ -0.36
KLF3-201ENST00000261438 TMEM89A2RUT3 159 aa12.82□□□□□ -0.36
KLF3-201ENST00000261438 SPAG11BQ08648 103 aa12.82□□□□□ -0.36
KLF3-201ENST00000261438 C9orf85Q96MD7 179 aa12.82□□□□□ -0.36
KLF3-201ENST00000261438 ADAMTSL4-AS1Q5T5F5 129 aa12.82□□□□□ -0.36
KLF3-201ENST00000261438 C1orf195Q5TG92 126 aa12.82□□□□□ -0.36
KLF3-201ENST00000261438 A6NDX4 124 aa12.81□□□□□ -0.36
KLF3-201ENST00000261438 PTPRSQ13332 1948 aa12.81□□□□□ -0.36
KLF3-201ENST00000261438 CCL24O00175 119 aa12.81□□□□□ -0.36
KLF3-201ENST00000261438 COX7BP24311 80 aa12.81□□□□□ -0.36
KLF3-201ENST00000261438 Q6ZTI0 123 aa12.81□□□□□ -0.36
KLF3-201ENST00000261438 Q8N6K4 173 aa12.81□□□□□ -0.36
KLF3-201ENST00000261438 ETDCA0A1B0GVM5 59 aa12.8□□□□□ -0.36
KLF3-201ENST00000261438 LINC01546A6NGU7 62 aa12.79□□□□□ -0.36
KLF3-201ENST00000261438 MAP6D1Q9H9H5 199 aa12.79□□□□□ -0.36
KLF3-201ENST00000261438 ZNF580Q9UK33 172 aa12.79□□□□□ -0.36
KLF3-201ENST00000261438 SERP1Q9Y6X1 66 aa12.79□□□□□ -0.36
KLF3-201ENST00000261438 CENPFP49454 3210 aa12.78□□□□□ -0.36
KLF3-201ENST00000261438 C6orf99Q4VX62 202 aa12.78□□□□□ -0.36
KLF3-201ENST00000261438 IGHV4-30-2A0A087WSY4 118 aa12.77□□□□□ -0.36
KLF3-201ENST00000261438 MRPL55Q7Z7F7 128 aaKnown RBP12.77□□□□□ -0.36
KLF3-201ENST00000261438 UBE2BP63146 152 aa12.77□□□□□ -0.37
KLF3-201ENST00000261438 IGF2-ASQ6U949 168 aa12.76□□□□□ -0.37
KLF3-201ENST00000261438 SPTSSBQ8NFR3 76 aa12.76□□□□□ -0.37
KLF3-201ENST00000261438 SORL1Q92673 2214 aa12.76□□□□□ -0.37
KLF3-201ENST00000261438 LRP4O75096 1905 aa12.75□□□□□ -0.37
KLF3-201ENST00000261438 CCKP06307 115 aa12.75□□□□□ -0.37
KLF3-201ENST00000261438 APOC4P55056 127 aa12.75□□□□□ -0.37
KLF3-201ENST00000261438 LMO4P61968 165 aa12.75□□□□□ -0.37
KLF3-201ENST00000261438 ACACBO00763 2458 aa12.75□□□□□ -0.37
KLF3-201ENST00000261438 F8W735 103 aaPredicted RBP12.75□□□□□ -0.37
KLF3-201ENST00000261438 ESM1Q9NQ30 184 aa12.74□□□□□ -0.37
KLF3-201ENST00000261438 IGKV2D-24A0A075B6R9 120 aa12.74□□□□□ -0.37
KLF3-201ENST00000261438 CSPG4Q6UVK1 2322 aa12.74□□□□□ -0.37
KLF3-201ENST00000261438 TRAV7A0A075B6U4 112 aa12.74□□□□□ -0.37
KLF3-201ENST00000261438 ADORA2A-AS1P86434 159 aa12.74□□□□□ -0.37
KLF3-201ENST00000261438 TET2Q6N021 2002 aaPredicted RBP12.73□□□□□ -0.37
KLF3-201ENST00000261438 TNFRSF13BO14836 293 aaPredicted RBP12.73□□□□□ -0.37
KLF3-201ENST00000261438 RPL28P46779 137 aaKnown RBP12.73□□□□□ -0.37
KLF3-201ENST00000261438 FBXL19-AS1Q494R0 122 aa12.73□□□□□ -0.37
KLF3-201ENST00000261438 PSCAO43653 123 aa12.73□□□□□ -0.37
KLF3-201ENST00000261438 SBSPONQ8IVN8 264 aa12.72□□□□□ -0.37
KLF3-201ENST00000261438 COL5A1P20908 1838 aaPredicted RBP12.72□□□□□ -0.37
KLF3-201ENST00000261438 DSCAMO60469 2012 aa12.71□□□□□ -0.37
KLF3-201ENST00000261438 CCL18P55774 89 aa12.71□□□□□ -0.37
KLF3-201ENST00000261438 LINC00242Q5T6M2 205 aa12.71□□□□□ -0.37
KLF3-201ENST00000261438 NDUFS5O43920 106 aa12.7□□□□□ -0.38
KLF3-201ENST00000261438 FAM19A3Q7Z5A8 133 aa12.7□□□□□ -0.38
KLF3-201ENST00000261438 AMELXQ99217 191 aa12.7□□□□□ -0.38
KLF3-201ENST00000261438 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
KLF3-201ENST00000261438 MIFP14174 115 aa12.69□□□□□ -0.38
KLF3-201ENST00000261438 MRGPRG-AS1Q2M3A8 158 aa12.69□□□□□ -0.38
KLF3-201ENST00000261438 KLK12Q9UKR0 248 aa12.69□□□□□ -0.38
KLF3-201ENST00000261438 PTPN13Q12923 2485 aa12.69□□□□□ -0.38
KLF3-201ENST00000261438 Q6ZQY7 126 aa12.69□□□□□ -0.38
KLF3-201ENST00000261438 Q8NA96 180 aa12.68□□□□□ -0.38
KLF3-201ENST00000261438 Q96MF0 132 aa12.68□□□□□ -0.38
KLF3-201ENST00000261438 PRO0255Q9UI72 69 aa12.68□□□□□ -0.38
KLF3-201ENST00000261438 A0A087WYN8 130 aa12.68□□□□□ -0.38
KLF3-201ENST00000261438 DCANP1Q8TF63 244 aa12.68□□□□□ -0.38
KLF3-201ENST00000261438 SMIM1B2RUZ4 78 aa12.68□□□□□ -0.38
KLF3-201ENST00000261438 TRBV6-8A0A0A6YYG3 113 aa12.67□□□□□ -0.38
KLF3-201ENST00000261438 CRYGAP11844 174 aa12.67□□□□□ -0.38
KLF3-201ENST00000261438 C4orf3Q8WVX3 66 aa12.67□□□□□ -0.38
KLF3-201ENST00000261438 PRM2P04554 102 aa12.66□□□□□ -0.38
KLF3-201ENST00000261438 CHCHD10Q8WYQ3 142 aaPredicted RBP12.66□□□□□ -0.38
KLF3-201ENST00000261438 LINC00846Q9NV44 126 aa12.66□□□□□ -0.38
KLF3-201ENST00000261438 REG3AQ06141 175 aa12.65□□□□□ -0.38
KLF3-201ENST00000261438 CDC42SE2Q9NRR3 84 aa12.65□□□□□ -0.38
KLF3-201ENST00000261438 TECTAO75443 2155 aa12.64□□□□□ -0.39
KLF3-201ENST00000261438 RPS28P62857 69 aaKnown RBP12.64□□□□□ -0.39
KLF3-201ENST00000261438 COX6A2Q02221 97 aa12.64□□□□□ -0.39
KLF3-201ENST00000261438 CHCHD7Q9BUK0 85 aa12.64□□□□□ -0.39
KLF3-201ENST00000261438 NOTCH2Q04721 2471 aa12.64□□□□□ -0.39
KLF3-201ENST00000261438 SOSTDC1Q6X4U4 206 aa12.64□□□□□ -0.39
KLF3-201ENST00000261438 UBE2DNLQ8IWF7 75 aa12.63□□□□□ -0.39
KLF3-201ENST00000261438 NTM-AS1Q6ZSK4 140 aa12.63□□□□□ -0.39
KLF3-201ENST00000261438 CACNA1AO00555 2505 aa12.63□□□□□ -0.39
KLF3-201ENST00000261438 TRBV6-4A0A1B0GX49 114 aa12.63□□□□□ -0.39
KLF3-201ENST00000261438 NDUFB1O75438 58 aa12.62□□□□□ -0.39
KLF3-201ENST00000261438 RMI2Q96E14 147 aa12.62□□□□□ -0.39
KLF3-201ENST00000261438 EXPH5Q8NEV8 1989 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms