RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 SH2D1AO60880 128 aa3.97□□□□□ -1.77
TOPBP1-201ENST00000260810 PDE6GP18545 87 aa3.97□□□□□ -1.77
TOPBP1-201ENST00000260810 LINC00612Q8N6U2 182 aa3.97□□□□□ -1.77
TOPBP1-201ENST00000260810 NPSP0C0P6 89 aa3.97□□□□□ -1.77
TOPBP1-201ENST00000260810 DEFB121Q5J5C9 76 aa3.97□□□□□ -1.77
TOPBP1-201ENST00000260810 ORAOV1Q8WV07 137 aa3.97□□□□□ -1.77
TOPBP1-201ENST00000260810 F8WDY8 70 aa3.96□□□□□ -1.77
TOPBP1-201ENST00000260810 NXPH4O95158 308 aa3.96□□□□□ -1.77
TOPBP1-201ENST00000260810 IGLV1-51P01701 117 aa3.96□□□□□ -1.77
TOPBP1-201ENST00000260810 RIPPLY3P57055 190 aa3.96□□□□□ -1.77
TOPBP1-201ENST00000260810 SMIM20Q8N5G0 67 aa3.96□□□□□ -1.77
TOPBP1-201ENST00000260810 MAPKAPK5-AS1Q8N8E1 139 aa3.96□□□□□ -1.77
TOPBP1-201ENST00000260810 A0A1W2PRX2 142 aa3.96□□□□□ -1.78
TOPBP1-201ENST00000260810 ACYP1P07311 99 aa3.96□□□□□ -1.78
TOPBP1-201ENST00000260810 GATA1P15976 413 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-201ENST00000260810 ZNF25P17030 456 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-201ENST00000260810 NTN5Q8WTR8 489 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-201ENST00000260810 IGHV3-11P01762 117 aa3.96□□□□□ -1.78
TOPBP1-201ENST00000260810 HTN3P15516 51 aa3.96□□□□□ -1.78
TOPBP1-201ENST00000260810 BVES-AS1Q5T3Y7 98 aa3.96□□□□□ -1.78
TOPBP1-201ENST00000260810 NTM-AS1Q6ZSK4 140 aa3.96□□□□□ -1.78
TOPBP1-201ENST00000260810 ATP5G1P05496 136 aa3.95□□□□□ -1.78
TOPBP1-201ENST00000260810 DDTP30046 118 aa3.95□□□□□ -1.78
TOPBP1-201ENST00000260810 EMP1P54849 157 aa3.95□□□□□ -1.78
TOPBP1-201ENST00000260810 SAMD5Q5TGI4 173 aa3.95□□□□□ -1.78
TOPBP1-201ENST00000260810 ZNF479Q96JC4 524 aa3.95□□□□□ -1.78
TOPBP1-201ENST00000260810 TOMM7Q9P0U1 55 aa3.95□□□□□ -1.78
TOPBP1-201ENST00000260810 G3V4G9 280 aa3.95□□□□□ -1.78
TOPBP1-201ENST00000260810 LGALS9O00182 355 aa3.95□□□□□ -1.78
TOPBP1-201ENST00000260810 MAJINQ3KP22 176 aa3.95□□□□□ -1.78
TOPBP1-201ENST00000260810 ZNF876PQ49A33 203 aa3.95□□□□□ -1.78
TOPBP1-201ENST00000260810 DEFB114Q30KQ6 69 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 HIST1H2BKO60814 126 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 HIST1H2BJP06899 126 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 HIST1H2BOP23527 126 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 HIST1H2BBP33778 126 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 CRYBA4P53673 196 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 HIST1H2BDP58876 126 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 HIST1H2BCP62807 126 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 HIST2H2BEQ16778 126 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 HIST1H2BHQ93079 126 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 HIST1H2BNQ99877 126 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 HIST1H2BMQ99879 126 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 SMIM27A0A1W2PRY6 76 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 C2orf70A6NJV1 201 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 LYRM9A8MSI8 78 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 C15orf53Q8NAA6 179 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 MDFICQ9P1T7 246 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 H0YGX0 51 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 CLUHP3Q96NS8 147 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 SMIM2Q9BVW6 85 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 SNHG12Q9BXW3 62 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 IGKV2-40A0A087WW87 121 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 TRBV10-1A0A0K0K1A3 114 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 IGKV2D-40P01614 121 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 KRTAP10-4P60372 401 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 CSTL1Q9H114 145 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 SIGLEC8Q9NYZ4 499 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 CELA1Q9UNI1 258 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 SPCS1Q9Y6A9 102 aa3.94□□□□□ -1.78
TOPBP1-201ENST00000260810 NIT1Q86X76 327 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 TMEM126AQ9H061 195 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 CCL24O00175 119 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 PAX4O43316 350 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 CBLN1P23435 193 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 DEFB131AP59861 70 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 GAGE2EQ4V326 116 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 GAGE2DQ9UEU5 116 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 ZNF706Q9Y5V0 76 aaPredicted RBP3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 SPATA25Q9BR10 227 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 A4D1N5 150 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 F5H768 121 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 LGALS9BQ3B8N2 356 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 OCIAD2Q56VL3 154 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 LGALS9CQ6DKI2 356 aa3.93□□□□□ -1.78
TOPBP1-201ENST00000260810 OXLD1Q5BKU9 147 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 LYZL1Q6UWQ5 148 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 LAMTOR3Q9UHA4 124 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 U3KQK5 164 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 NDUFB1O75438 58 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 IGKV3-20P01619 116 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 PRB2P02812 416 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 DEFB125Q8N687 156 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 C1orf43Q9BWL3 253 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 UBL5Q9BZL1 73 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 NDUFA12Q9UI09 145 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 K7EIL1 84 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 SYNJ2BPP57105 145 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 COA6Q5JTJ3 125 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 FAM104BQ5XKR9 115 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 UBE2WQ96B02 151 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 IGKV3OR2-268A0A0C4DH90 116 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 K7EQD1 137 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 CD300EQ496F6 205 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 PIK3CD-AS1Q5SR53 167 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 SLC25A29Q8N8R3 303 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 Q8NAQ8 132 aa3.92□□□□□ -1.78
TOPBP1-201ENST00000260810 TRAV26-1A0A087WT03 109 aa3.91□□□□□ -1.78
TOPBP1-201ENST00000260810 KIR2DL5BA0A0G2JN68 375 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms