RNA–Protein interactions for RNA: ENST00000259241.6

HS6ST1-201, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS6ST1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-201ENST00000259241 A0A096LNJ9 63 aa9.46□□□□□ -0.9
HS6ST1-201ENST00000259241 NTN5Q8WTR8 489 aaPredicted RBP9.46□□□□□ -0.9
HS6ST1-201ENST00000259241 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
HS6ST1-201ENST00000259241 FAM222AQ5U5X8 452 aa9.45□□□□□ -0.9
HS6ST1-201ENST00000259241 CFAP126Q5VTH2 177 aa9.45□□□□□ -0.9
HS6ST1-201ENST00000259241 UBE2DNLQ8IWF7 75 aa9.45□□□□□ -0.9
HS6ST1-201ENST00000259241 SLC25A29Q8N8R3 303 aa9.45□□□□□ -0.9
HS6ST1-201ENST00000259241 TRAV25A0A0B4J276 109 aa9.45□□□□□ -0.9
HS6ST1-201ENST00000259241 SETXQ7Z333 2677 aaKnown RBP9.45□□□□□ -0.9
HS6ST1-201ENST00000259241 ZNF561-AS1K7EIQ3 104 aa9.45□□□□□ -0.9
HS6ST1-201ENST00000259241 TAL2Q16559 108 aa9.45□□□□□ -0.9
HS6ST1-201ENST00000259241 IGLV4-3A0A075B6K6 122 aa9.44□□□□□ -0.9
HS6ST1-201ENST00000259241 SLC25A20O43772 301 aa9.44□□□□□ -0.9
HS6ST1-201ENST00000259241 C2orf91Q6ZV80 131 aa9.44□□□□□ -0.9
HS6ST1-201ENST00000259241 PRB2P02812 416 aaPredicted RBP9.44□□□□□ -0.9
HS6ST1-201ENST00000259241 EDA2RQ9HAV5 297 aa9.44□□□□□ -0.9
HS6ST1-201ENST00000259241 NDUFA7O95182 113 aa9.44□□□□□ -0.9
HS6ST1-201ENST00000259241 C10orf126Q8N4M7 172 aa9.44□□□□□ -0.9
HS6ST1-201ENST00000259241 KLK12Q9UKR0 248 aa9.44□□□□□ -0.9
HS6ST1-201ENST00000259241 RNF152Q8N8N0 203 aa9.43□□□□□ -0.9
HS6ST1-201ENST00000259241 LAMTOR3Q9UHA4 124 aa9.43□□□□□ -0.9
HS6ST1-201ENST00000259241 ATP5G1P05496 136 aa9.43□□□□□ -0.9
HS6ST1-201ENST00000259241 DAZ2Q13117 558 aaKnown RBP9.43□□□□□ -0.9
HS6ST1-201ENST00000259241 DAZ4Q86SG3 579 aaKnown RBP9.43□□□□□ -0.9
HS6ST1-201ENST00000259241 DAZ3Q9NR90 486 aaKnown RBP9.43□□□□□ -0.9
HS6ST1-201ENST00000259241 GAGE2AQ6NT46 116 aa9.42□□□□□ -0.9
HS6ST1-201ENST00000259241 COL27A1Q8IZC6 1860 aaPredicted RBP9.42□□□□□ -0.9
HS6ST1-201ENST00000259241 IGKV2D-24A0A075B6R9 120 aa9.42□□□□□ -0.9
HS6ST1-201ENST00000259241 TRAV26-1A0A087WT03 109 aa9.42□□□□□ -0.9
HS6ST1-201ENST00000259241 TRAV4A0A0B4J268 109 aa9.42□□□□□ -0.9
HS6ST1-201ENST00000259241 SPART-AS1P0CW21 52 aa9.42□□□□□ -0.9
HS6ST1-201ENST00000259241 ZNF22P17026 224 aaPredicted RBP9.42□□□□□ -0.9
HS6ST1-201ENST00000259241 DNAJC30Q96LL9 226 aa9.42□□□□□ -0.9
HS6ST1-201ENST00000259241 CARD19Q96LW7 228 aa9.42□□□□□ -0.9
HS6ST1-201ENST00000259241 STAB1Q9NY15 2570 aa9.41□□□□□ -0.9
HS6ST1-201ENST00000259241 IGHV4-4A0A075B6R2 117 aa9.41□□□□□ -0.9
HS6ST1-201ENST00000259241 POLR2KP53803 58 aaKnown RBP9.41□□□□□ -0.9
HS6ST1-201ENST00000259241 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
HS6ST1-201ENST00000259241 LAMA5O15230 3695 aa9.41□□□□□ -0.9
HS6ST1-201ENST00000259241 DMDP11532 3685 aa9.41□□□□□ -0.9
HS6ST1-201ENST00000259241 NOTCH1P46531 2555 aa9.41□□□□□ -0.9
HS6ST1-201ENST00000259241 PSCAO43653 123 aa9.41□□□□□ -0.9
HS6ST1-201ENST00000259241 TRBV20-1A0A075B6N2 111 aa9.4□□□□□ -0.9
HS6ST1-201ENST00000259241 SOCS3O14543 225 aa9.4□□□□□ -0.9
HS6ST1-201ENST00000259241 CLEC2BQ92478 149 aa9.4□□□□□ -0.9
HS6ST1-201ENST00000259241 HIGD1BQ9P298 99 aa9.4□□□□□ -0.9
HS6ST1-201ENST00000259241 F8W1H4 67 aa9.4□□□□□ -0.9
HS6ST1-201ENST00000259241 TSHBP01222 138 aa9.4□□□□□ -0.9
HS6ST1-201ENST00000259241 TRBV27A0A0K0K1C4 114 aa9.4□□□□□ -0.91
HS6ST1-201ENST00000259241 GAGE2BQ13066 116 aa9.4□□□□□ -0.91
HS6ST1-201ENST00000259241 GAGE2EQ4V326 116 aa9.4□□□□□ -0.91
HS6ST1-201ENST00000259241 GAGE2DQ9UEU5 116 aa9.4□□□□□ -0.91
HS6ST1-201ENST00000259241 OXLD1Q5BKU9 147 aa9.39□□□□□ -0.91
HS6ST1-201ENST00000259241 ODF3Q96PU9 254 aa9.39□□□□□ -0.91
HS6ST1-201ENST00000259241 IGHV1-58A0A0C4DH39 117 aa9.39□□□□□ -0.91
HS6ST1-201ENST00000259241 TINCRA0A1B0GVN0 87 aa9.39□□□□□ -0.91
HS6ST1-201ENST00000259241 LINC00526Q96FQ7 95 aa9.39□□□□□ -0.91
HS6ST1-201ENST00000259241 ZNF580Q9UK33 172 aa9.39□□□□□ -0.91
HS6ST1-201ENST00000259241 NFE4Q86UQ8 179 aa9.39□□□□□ -0.91
HS6ST1-201ENST00000259241 MIR7-3HGQ8N6C7 128 aa9.39□□□□□ -0.91
HS6ST1-201ENST00000259241 SND1-IT1Q9HBX3 110 aa9.39□□□□□ -0.91
HS6ST1-201ENST00000259241 NBEAL1Q6ZS30 2694 aa9.39□□□□□ -0.91
HS6ST1-201ENST00000259241 CRIP2P52943 208 aaPredicted RBP9.38□□□□□ -0.91
HS6ST1-201ENST00000259241 C9orf85Q96MD7 179 aa9.38□□□□□ -0.91
HS6ST1-201ENST00000259241 PRO0255Q9UI72 69 aa9.38□□□□□ -0.91
HS6ST1-201ENST00000259241 A0A0J9YXY3 114 aa9.37□□□□□ -0.91
HS6ST1-201ENST00000259241 HILS1P60008 231 aa9.37□□□□□ -0.91
HS6ST1-201ENST00000259241 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
HS6ST1-201ENST00000259241 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.37□□□□□ -0.91
HS6ST1-201ENST00000259241 Q9UF83 564 aa9.37□□□□□ -0.91
HS6ST1-201ENST00000259241 NBEAL2Q6ZNJ1 2754 aa9.37□□□□□ -0.91
HS6ST1-201ENST00000259241 LINC00269Q8N2A0 174 aa9.37□□□□□ -0.91
HS6ST1-201ENST00000259241 PPDPFLQ8WWR9 84 aa9.37□□□□□ -0.91
HS6ST1-201ENST00000259241 HIST1H4AP62805 103 aaKnown RBP9.37□□□□□ -0.91
HS6ST1-201ENST00000259241 COX7B2Q8TF08 81 aa9.37□□□□□ -0.91
HS6ST1-201ENST00000259241 RELNP78509 3460 aa9.36□□□□□ -0.91
HS6ST1-201ENST00000259241 GAGE12HA6NDE8 117 aa9.36□□□□□ -0.91
HS6ST1-201ENST00000259241 Q6ZSN1 163 aa9.36□□□□□ -0.91
HS6ST1-201ENST00000259241 ANAPC13Q9BS18 74 aa9.36□□□□□ -0.91
HS6ST1-201ENST00000259241 ASH1LQ9NR48 2969 aaKnown RBP9.36□□□□□ -0.91
HS6ST1-201ENST00000259241 PIK3CD-AS1Q5SR53 167 aa9.36□□□□□ -0.91
HS6ST1-201ENST00000259241 ZANQ9Y493 2812 aa9.36□□□□□ -0.91
HS6ST1-201ENST00000259241 UNC79Q9P2D8 2635 aa9.36□□□□□ -0.91
HS6ST1-201ENST00000259241 NDUFA11Q86Y39 141 aa9.36□□□□□ -0.91
HS6ST1-201ENST00000259241 COL6A5A8TX70 2615 aa9.35□□□□□ -0.91
HS6ST1-201ENST00000259241 TRBV10-1A0A0K0K1A3 114 aa9.35□□□□□ -0.91
HS6ST1-201ENST00000259241 PRSS47A8MTI9 375 aa9.35□□□□□ -0.91
HS6ST1-201ENST00000259241 COX7A2LO14548 114 aa9.35□□□□□ -0.91
HS6ST1-201ENST00000259241 C1orf158Q8N1D5 194 aa9.34□□□□□ -0.91
HS6ST1-201ENST00000259241 RBMY1FQ15415 496 aaKnown RBP9.34□□□□□ -0.91
HS6ST1-201ENST00000259241 ICOSQ9Y6W8 199 aa9.34□□□□□ -0.91
HS6ST1-201ENST00000259241 HIGD2BQ4VC39 106 aa9.33□□□□□ -0.92
HS6ST1-201ENST00000259241 ZFAND6Q6FIF0 208 aa9.33□□□□□ -0.92
HS6ST1-201ENST00000259241 TRBV6-5A0A0K0K1A5 114 aa9.32□□□□□ -0.92
HS6ST1-201ENST00000259241 TCL1BO95988 128 aa9.32□□□□□ -0.92
HS6ST1-201ENST00000259241 TMEM223A0PJW6 202 aa9.32□□□□□ -0.92
HS6ST1-201ENST00000259241 IGIPA6NJ69 53 aa9.32□□□□□ -0.92
HS6ST1-201ENST00000259241 LINC01620Q4KN68 170 aa9.32□□□□□ -0.92
HS6ST1-201ENST00000259241 C1orf43Q9BWL3 253 aa9.32□□□□□ -0.92
HS6ST1-201ENST00000259241 BAALC-AS2P0C853 105 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms