RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 IGHV3-53P01767 116 aa12.28□□□□□ -0.44
CDK4-201ENST00000257904 IGHV4-31P0DP07 118 aa12.28□□□□□ -0.44
CDK4-201ENST00000257904 IFITM1P13164 125 aa12.28□□□□□ -0.44
CDK4-201ENST00000257904 SLURP1P55000 103 aa12.28□□□□□ -0.44
CDK4-201ENST00000257904 CLEC2BQ92478 149 aa12.28□□□□□ -0.44
CDK4-201ENST00000257904 DNAJC30Q96LL9 226 aa12.28□□□□□ -0.44
CDK4-201ENST00000257904 CDKN2A-AS1Q9UH64 79 aa12.28□□□□□ -0.44
CDK4-201ENST00000257904 LST1O00453 97 aa12.28□□□□□ -0.44
CDK4-201ENST00000257904 IGLV5-45A0A087WSX0 123 aa12.27□□□□□ -0.45
CDK4-201ENST00000257904 NDUFA1O15239 70 aa12.27□□□□□ -0.45
CDK4-201ENST00000257904 NHLRC4P0CG21 123 aaPredicted RBP12.27□□□□□ -0.45
CDK4-201ENST00000257904 HIST2H2BCQ6DN03 193 aa12.27□□□□□ -0.45
CDK4-201ENST00000257904 C11orf72Q8NBR9 251 aa12.27□□□□□ -0.45
CDK4-201ENST00000257904 CR1P17927 2039 aa12.27□□□□□ -0.45
CDK4-201ENST00000257904 HELZ2Q9BYK8 2649 aaKnown RBP12.27□□□□□ -0.45
CDK4-201ENST00000257904 TIRAPP58753 221 aa12.26□□□□□ -0.45
CDK4-201ENST00000257904 DEFB136Q30KP8 78 aa12.26□□□□□ -0.45
CDK4-201ENST00000257904 ZANQ9Y493 2812 aa12.26□□□□□ -0.45
CDK4-201ENST00000257904 NDUFV3P56181 108 aaKnown RBP12.26□□□□□ -0.45
CDK4-201ENST00000257904 Q6Q795 121 aa12.26□□□□□ -0.45
CDK4-201ENST00000257904 C18orf65Q6ZTR6 163 aa12.26□□□□□ -0.45
CDK4-201ENST00000257904 DAND5Q8N907 189 aa12.26□□□□□ -0.45
CDK4-201ENST00000257904 BEAN1Q3B7T3 259 aa12.25□□□□□ -0.45
CDK4-201ENST00000257904 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.25□□□□□ -0.45
CDK4-201ENST00000257904 TMEM101Q96IK0 257 aa12.25□□□□□ -0.45
CDK4-201ENST00000257904 Q96MF0 132 aa12.25□□□□□ -0.45
CDK4-201ENST00000257904 LINC01587Q99440 93 aa12.25□□□□□ -0.45
CDK4-201ENST00000257904 KRTAP1-3Q8IUG1 177 aa12.25□□□□□ -0.45
CDK4-201ENST00000257904 C15orf53Q8NAA6 179 aa12.25□□□□□ -0.45
CDK4-201ENST00000257904 GAGE5Q13069 117 aa12.24□□□□□ -0.45
CDK4-201ENST00000257904 GAGE6Q13070 117 aa12.24□□□□□ -0.45
CDK4-201ENST00000257904 RS1O15537 224 aa12.23□□□□□ -0.45
CDK4-201ENST00000257904 MAP6D1Q9H9H5 199 aa12.23□□□□□ -0.45
CDK4-201ENST00000257904 Q6YL49 198 aa12.23□□□□□ -0.45
CDK4-201ENST00000257904 CITED2Q99967 270 aaPredicted RBP12.23□□□□□ -0.45
CDK4-201ENST00000257904 FSHBP01225 129 aa12.22□□□□□ -0.45
CDK4-201ENST00000257904 COX6A2Q02221 97 aa12.22□□□□□ -0.45
CDK4-201ENST00000257904 CIRBPQ14011 172 aaKnown RBP12.22□□□□□ -0.45
CDK4-201ENST00000257904 TTC32Q5I0X7 151 aa12.22□□□□□ -0.45
CDK4-201ENST00000257904 DEFB121Q5J5C9 76 aa12.22□□□□□ -0.45
CDK4-201ENST00000257904 DGAT2L7PQ6IED9 249 aa12.22□□□□□ -0.45
CDK4-201ENST00000257904 IGHV3OR16-12A0A075B7B8 117 aa12.21□□□□□ -0.45
CDK4-201ENST00000257904 IGLV5-39A0A0G2JS06 123 aa12.21□□□□□ -0.45
CDK4-201ENST00000257904 FAM240AA0A1B0GVK7 77 aa12.21□□□□□ -0.45
CDK4-201ENST00000257904 INSP01308 110 aa12.21□□□□□ -0.45
CDK4-201ENST00000257904 LINC00308Q8TCZ7 52 aa12.21□□□□□ -0.45
CDK4-201ENST00000257904 PEMTQ9UBM1 199 aa12.21□□□□□ -0.45
CDK4-201ENST00000257904 MRPL23Q16540 153 aaKnown RBP12.2□□□□□ -0.46
CDK4-201ENST00000257904 Q9H8V8 135 aa12.2□□□□□ -0.46
CDK4-201ENST00000257904 CREBBPQ92793 2442 aa12.2□□□□□ -0.46
CDK4-201ENST00000257904 HERVK_113P63121 156 aa12.2□□□□□ -0.46
CDK4-201ENST00000257904 LINC00242Q5T6M2 205 aa12.2□□□□□ -0.46
CDK4-201ENST00000257904 B5MCH6 92 aa12.17□□□□□ -0.46
CDK4-201ENST00000257904 FAM19A3Q7Z5A8 133 aa12.17□□□□□ -0.46
CDK4-201ENST00000257904 DYNLRB2Q8TF09 96 aa12.17□□□□□ -0.46
CDK4-201ENST00000257904 SS18L2Q9UHA2 77 aa12.17□□□□□ -0.46
CDK4-201ENST00000257904 ZNF625Q96I27 306 aaPredicted RBP12.17□□□□□ -0.46
CDK4-201ENST00000257904 TEX15Q9BXT5 2789 aa12.17□□□□□ -0.46
CDK4-201ENST00000257904 SMIM1B2RUZ4 78 aa12.16□□□□□ -0.46
CDK4-201ENST00000257904 LINC00694P0DN24 101 aa12.16□□□□□ -0.46
CDK4-201ENST00000257904 WFDC11Q8NEX6 87 aa12.16□□□□□ -0.46
CDK4-201ENST00000257904 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 GAGE7O76087 117 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 GAGE12FP0CL80 117 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 GAGE12GP0CL81 117 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 GAGE12IP0CL82 117 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 GAGE4Q13068 117 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 C4orf3Q8WVX3 66 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 MXRA5Q9NR99 2828 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 A0A0U1RRA0 63 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 COX7A2LO14548 114 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 DEFB114Q30KQ6 69 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 SOSTDC1Q6X4U4 206 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 Q8N2B8 174 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 COPS9Q8WXC6 57 aa12.15□□□□□ -0.46
CDK4-201ENST00000257904 CCDC179H3BU77 68 aa12.14□□□□□ -0.47
CDK4-201ENST00000257904 NDUFA7O95182 113 aa12.14□□□□□ -0.47
CDK4-201ENST00000257904 XCL2Q9UBD3 114 aa12.14□□□□□ -0.47
CDK4-201ENST00000257904 CSDC2Q9Y534 153 aaKnown RBP12.14□□□□□ -0.47
CDK4-201ENST00000257904 ZNF469Q96JG9 3925 aaPredicted RBP12.14□□□□□ -0.47
CDK4-201ENST00000257904 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
CDK4-201ENST00000257904 IL17DQ8TAD2 202 aa12.14□□□□□ -0.47
CDK4-201ENST00000257904 ITPR3Q14573 2671 aa12.13□□□□□ -0.47
CDK4-201ENST00000257904 PDZD2O15018 2839 aa12.13□□□□□ -0.47
CDK4-201ENST00000257904 KHDC1LQ5JSQ8 128 aa12.13□□□□□ -0.47
CDK4-201ENST00000257904 CCDC168Q8NDH2 2452 aa12.12□□□□□ -0.47
CDK4-201ENST00000257904 TRGV1A0A0A0MS02 117 aa12.12□□□□□ -0.47
CDK4-201ENST00000257904 TRAV13-1A0A0B4J241 112 aa12.12□□□□□ -0.47
CDK4-201ENST00000257904 PRIMA1Q86XR5 153 aa12.12□□□□□ -0.47
CDK4-201ENST00000257904 SVIPQ8NHG7 77 aa12.12□□□□□ -0.47
CDK4-201ENST00000257904 GCN1Q92616 2671 aaKnown RBP12.12□□□□□ -0.47
CDK4-201ENST00000257904 RPL36AP83881 106 aaKnown RBP12.12□□□□□ -0.47
CDK4-201ENST00000257904 NTM-AS1Q6ZSK4 140 aa12.12□□□□□ -0.47
CDK4-201ENST00000257904 RPL36ALQ969Q0 106 aaKnown RBP12.12□□□□□ -0.47
CDK4-201ENST00000257904 MEIG1Q5JSS6 88 aa12.11□□□□□ -0.47
CDK4-201ENST00000257904 C1orf158Q8N1D5 194 aa12.11□□□□□ -0.47
CDK4-201ENST00000257904 ITPR2Q14571 2701 aa12.11□□□□□ -0.47
CDK4-201ENST00000257904 UNC79Q9P2D8 2635 aa12.11□□□□□ -0.47
CDK4-201ENST00000257904 TRBV10-1A0A0K0K1A3 114 aa12.1□□□□□ -0.47
CDK4-201ENST00000257904 TRBV7-7A0A0K0K1E9 115 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms