RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 GEMIN7Q9H840 131 aaKnown RBP18.38■□□□□ 0.53
RAB40C-201ENST00000248139 RS1O15537 224 aa18.38■□□□□ 0.53
RAB40C-201ENST00000248139 LINC00694P0DN24 101 aa18.38■□□□□ 0.53
RAB40C-201ENST00000248139 COX6A2Q02221 97 aa18.38■□□□□ 0.53
RAB40C-201ENST00000248139 LYRM7Q5U5X0 104 aa18.38■□□□□ 0.53
RAB40C-201ENST00000248139 Q6ZTI0 123 aa18.38■□□□□ 0.53
RAB40C-201ENST00000248139 TINCRA0A1B0GVN0 87 aa18.37■□□□□ 0.53
RAB40C-201ENST00000248139 C9JAW5 83 aa18.37■□□□□ 0.53
RAB40C-201ENST00000248139 SPANXA1Q9NS26 97 aa18.37■□□□□ 0.53
RAB40C-201ENST00000248139 TRBV20-1A0A075B6N2 111 aa18.36■□□□□ 0.53
RAB40C-201ENST00000248139 CCL24O00175 119 aa18.36■□□□□ 0.53
RAB40C-201ENST00000248139 DGAT2L7PQ6IED9 249 aa18.36■□□□□ 0.53
RAB40C-201ENST00000248139 CITED2Q99967 270 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-201ENST00000248139 A0A0U1RRA0 63 aa18.36■□□□□ 0.53
RAB40C-201ENST00000248139 ANKRD29Q8N6D5 301 aa18.36■□□□□ 0.53
RAB40C-201ENST00000248139 ZNF625Q96I27 306 aaPredicted RBP18.35■□□□□ 0.53
RAB40C-201ENST00000248139 A0A0B4J2C4 111 aa18.34■□□□□ 0.53
RAB40C-201ENST00000248139 TEN1Q86WV5 123 aa18.34■□□□□ 0.53
RAB40C-201ENST00000248139 PLA2G2AP14555 144 aa18.33■□□□□ 0.53
RAB40C-201ENST00000248139 LRRC75A-AS1Q8N1F1 130 aa18.33■□□□□ 0.53
RAB40C-201ENST00000248139 CDIP1Q9H305 208 aa18.33■□□□□ 0.53
RAB40C-201ENST00000248139 PIK3CD-AS1Q5SR53 167 aa18.32■□□□□ 0.52
RAB40C-201ENST00000248139 ANK3Q12955 4377 aaKnown RBP18.32■□□□□ 0.52
RAB40C-201ENST00000248139 SLC25A20O43772 301 aa18.32■□□□□ 0.52
RAB40C-201ENST00000248139 TRIAP1O43715 76 aa18.31■□□□□ 0.52
RAB40C-201ENST00000248139 CRYBA4P53673 196 aa18.31■□□□□ 0.52
RAB40C-201ENST00000248139 ATP6V0E2Q8NHE4 81 aa18.31■□□□□ 0.52
RAB40C-201ENST00000248139 FN1P02751 2386 aaKnown RBP18.3■□□□□ 0.52
RAB40C-201ENST00000248139 TMEM101Q96IK0 257 aa18.3■□□□□ 0.52
RAB40C-201ENST00000248139 DNAJC30Q96LL9 226 aa18.3■□□□□ 0.52
RAB40C-201ENST00000248139 NOP10Q9NPE3 64 aaKnown RBP18.3■□□□□ 0.52
RAB40C-201ENST00000248139 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.3■□□□□ 0.52
RAB40C-201ENST00000248139 TRAV13-1A0A0B4J241 112 aa18.3■□□□□ 0.52
RAB40C-201ENST00000248139 GAGE12JA6NER3 117 aa18.3■□□□□ 0.52
RAB40C-201ENST00000248139 GAGE4Q13068 117 aa18.3■□□□□ 0.52
RAB40C-201ENST00000248139 GAGE5Q13069 117 aa18.3■□□□□ 0.52
RAB40C-201ENST00000248139 NTM-AS1Q6ZSK4 140 aa18.3■□□□□ 0.52
RAB40C-201ENST00000248139 PPDPFLQ8WWR9 84 aa18.29■□□□□ 0.52
RAB40C-201ENST00000248139 SBSPONQ8IVN8 264 aa18.28■□□□□ 0.52
RAB40C-201ENST00000248139 RPL35AP18077 110 aaKnown RBP18.28■□□□□ 0.52
RAB40C-201ENST00000248139 PDZD2O15018 2839 aa18.28■□□□□ 0.52
RAB40C-201ENST00000248139 MIAQ16674 131 aa18.27■□□□□ 0.52
RAB40C-201ENST00000248139 ZFAND6Q6FIF0 208 aa18.26■□□□□ 0.51
RAB40C-201ENST00000248139 MT-ATP8P03928 68 aa18.26■□□□□ 0.51
RAB40C-201ENST00000248139 LINC00242Q5T6M2 205 aa18.26■□□□□ 0.51
RAB40C-201ENST00000248139 NBEAL2Q6ZNJ1 2754 aa18.25■□□□□ 0.51
RAB40C-201ENST00000248139 LOC100131303A0A0U1RQF7 123 aa18.25■□□□□ 0.51
RAB40C-201ENST00000248139 GIG44P09565 113 aaPredicted RBP18.24■□□□□ 0.51
RAB40C-201ENST00000248139 IL17DQ8TAD2 202 aa18.24■□□□□ 0.51
RAB40C-201ENST00000248139 XGP55808 180 aa18.24■□□□□ 0.51
RAB40C-201ENST00000248139 SPANXDQ9BXN6 97 aa18.24■□□□□ 0.51
RAB40C-201ENST00000248139 SPANXCQ9NY87 97 aa18.24■□□□□ 0.51
RAB40C-201ENST00000248139 K7EQD1 137 aa18.23■□□□□ 0.51
RAB40C-201ENST00000248139 CLEC2BQ92478 149 aa18.23■□□□□ 0.51
RAB40C-201ENST00000248139 Q9H8V8 135 aa18.23■□□□□ 0.51
RAB40C-201ENST00000248139 GAGE7O76087 117 aa18.22■□□□□ 0.51
RAB40C-201ENST00000248139 GAGE12FP0CL80 117 aa18.22■□□□□ 0.51
RAB40C-201ENST00000248139 GAGE12GP0CL81 117 aa18.22■□□□□ 0.51
RAB40C-201ENST00000248139 GAGE12IP0CL82 117 aa18.22■□□□□ 0.51
RAB40C-201ENST00000248139 RPL36AP83881 106 aaKnown RBP18.22■□□□□ 0.51
RAB40C-201ENST00000248139 RPL36ALQ969Q0 106 aaKnown RBP18.22■□□□□ 0.51
RAB40C-201ENST00000248139 LINC01620Q4KN68 170 aa18.22■□□□□ 0.51
RAB40C-201ENST00000248139 TMEM86BQ8N661 226 aa18.22■□□□□ 0.51
RAB40C-201ENST00000248139 LINC01006Q8NI28 216 aa18.22■□□□□ 0.51
RAB40C-201ENST00000248139 NTN5Q8WTR8 489 aaPredicted RBP18.21■□□□□ 0.51
RAB40C-201ENST00000248139 ICOSQ9Y6W8 199 aa18.21■□□□□ 0.51
RAB40C-201ENST00000248139 TRAV25A0A0B4J276 109 aa18.2■□□□□ 0.5
RAB40C-201ENST00000248139 GCN1Q92616 2671 aaKnown RBP18.2■□□□□ 0.5
RAB40C-201ENST00000248139 ATXN8Q156A1 80 aa18.2■□□□□ 0.5
RAB40C-201ENST00000248139 TIRAPP58753 221 aa18.19■□□□□ 0.5
RAB40C-201ENST00000248139 TRBV30A0A0K0K1B3 111 aa18.18■□□□□ 0.5
RAB40C-201ENST00000248139 YAE1D1Q9NRH1 226 aa18.18■□□□□ 0.5
RAB40C-201ENST00000248139 TRGV2A0A075B6R0 118 aa18.17■□□□□ 0.5
RAB40C-201ENST00000248139 IGLV5-45A0A087WSX0 123 aa18.17■□□□□ 0.5
RAB40C-201ENST00000248139 IGKV3OR2-268A0A0C4DH90 116 aa18.17■□□□□ 0.5
RAB40C-201ENST00000248139 TEX49A0A1B0GTD5 131 aa18.17■□□□□ 0.5
RAB40C-201ENST00000248139 RPL13AP40429 203 aaKnown RBP18.17■□□□□ 0.5
RAB40C-201ENST00000248139 CLUHP3Q96NS8 147 aa18.17■□□□□ 0.5
RAB40C-201ENST00000248139 NDUFA1O15239 70 aa18.16■□□□□ 0.5
RAB40C-201ENST00000248139 SMIM1B2RUZ4 78 aa18.16■□□□□ 0.5
RAB40C-201ENST00000248139 HELZ2Q9BYK8 2649 aaKnown RBP18.15■□□□□ 0.5
RAB40C-201ENST00000248139 PLAC8L1A1L4L8 177 aa18.15■□□□□ 0.5
RAB40C-201ENST00000248139 TRAV4A0A0B4J268 109 aa18.15■□□□□ 0.5
RAB40C-201ENST00000248139 SCGB1A1P11684 91 aa18.15■□□□□ 0.5
RAB40C-201ENST00000248139 HERVK_113P63121 156 aa18.15■□□□□ 0.5
RAB40C-201ENST00000248139 KRTAP1-1Q07627 177 aa18.14■□□□□ 0.49
RAB40C-201ENST00000248139 CDC42SE2Q9NRR3 84 aa18.14■□□□□ 0.49
RAB40C-201ENST00000248139 SOSTDC1Q6X4U4 206 aa18.13■□□□□ 0.49
RAB40C-201ENST00000248139 VWFP04275 2813 aa18.13■□□□□ 0.49
RAB40C-201ENST00000248139 IGLV5-39A0A0G2JS06 123 aa18.12■□□□□ 0.49
RAB40C-201ENST00000248139 DAZ2Q13117 558 aaKnown RBP18.12■□□□□ 0.49
RAB40C-201ENST00000248139 DAZ4Q86SG3 579 aaKnown RBP18.12■□□□□ 0.49
RAB40C-201ENST00000248139 LINC00308Q8TCZ7 52 aa18.12■□□□□ 0.49
RAB40C-201ENST00000248139 DAZ3Q9NR90 486 aaKnown RBP18.12■□□□□ 0.49
RAB40C-201ENST00000248139 FASNP49327 2511 aaKnown RBP18.11■□□□□ 0.49
RAB40C-201ENST00000248139 TRBV10-1A0A0K0K1A3 114 aa18.11■□□□□ 0.49
RAB40C-201ENST00000248139 PRIMA1Q86XR5 153 aa18.11■□□□□ 0.49
RAB40C-201ENST00000248139 C19orf73Q9NVV2 129 aa18.1■□□□□ 0.49
RAB40C-201ENST00000248139 H7C423 109 aa18.1■□□□□ 0.49
RAB40C-201ENST00000248139 MEIG1Q5JSS6 88 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms