RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 TLN1Q9Y490 2541 aaKnown RBP6.93□□□□□ -1.3
SRSF6-201ENST00000244020 LRCOL1A6NCL2 159 aa6.93□□□□□ -1.3
SRSF6-201ENST00000244020 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
SRSF6-201ENST00000244020 MED14OSP0DP75 135 aa6.93□□□□□ -1.3
SRSF6-201ENST00000244020 POLR2KP53803 58 aaKnown RBP6.93□□□□□ -1.3
SRSF6-201ENST00000244020 STHQ8IWL8 128 aa6.93□□□□□ -1.3
SRSF6-201ENST00000244020 SND1-IT1Q9HBX3 110 aa6.93□□□□□ -1.3
SRSF6-201ENST00000244020 USP17L23D6RBM5 183 aa6.93□□□□□ -1.3
SRSF6-201ENST00000244020 PRR4Q16378 134 aa6.93□□□□□ -1.3
SRSF6-201ENST00000244020 CLPSL2Q6UWE3 100 aa6.93□□□□□ -1.3
SRSF6-201ENST00000244020 COX7B2Q8TF08 81 aa6.93□□□□□ -1.3
SRSF6-201ENST00000244020 RNF223E7ERA6 249 aa6.93□□□□□ -1.3
SRSF6-201ENST00000244020 P0DMU3 169 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 FAM231AP0DMU4 169 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 FAM231CP0DMU5 169 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 SEC61GP60059 68 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 HIVEP3Q5T1R4 2406 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 IGHV4OR15-8A0A075B7B6 117 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 A0A087WW49 117 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 TRIAP1O43715 76 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 NHLRC4P0CG21 123 aaPredicted RBP6.92□□□□□ -1.3
SRSF6-201ENST00000244020 ENHOQ6UWT2 76 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 DEFB105AQ8NG35 78 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 TMEM223A0PJW6 202 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 FAM223BA6NKX1 122 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 FAM223AQ8IWN6 122 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 SERP2Q8N6R1 65 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 UPK3BQ9BT76 320 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 ELANEP08246 267 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 C5orf38Q86SI9 138 aa6.92□□□□□ -1.3
SRSF6-201ENST00000244020 ZNF22P17026 224 aaPredicted RBP6.91□□□□□ -1.3
SRSF6-201ENST00000244020 Q8NA96 180 aa6.91□□□□□ -1.3
SRSF6-201ENST00000244020 A0A0J9YXY3 114 aa6.91□□□□□ -1.3
SRSF6-201ENST00000244020 NDUFA4O00483 81 aa6.91□□□□□ -1.3
SRSF6-201ENST00000244020 TRBV27A0A0K0K1C4 114 aa6.9□□□□□ -1.3
SRSF6-201ENST00000244020 F8WEM9 126 aa6.9□□□□□ -1.3
SRSF6-201ENST00000244020 IGHV3-30-3P0DP02 117 aa6.9□□□□□ -1.3
SRSF6-201ENST00000244020 DEFB130BP0DP73 79 aa6.9□□□□□ -1.3
SRSF6-201ENST00000244020 DEFB130AP0DP74 79 aa6.9□□□□□ -1.3
SRSF6-201ENST00000244020 ZNF580Q9UK33 172 aa6.9□□□□□ -1.3
SRSF6-201ENST00000244020 FN1P02751 2386 aaKnown RBP6.9□□□□□ -1.31
SRSF6-201ENST00000244020 XCL2Q9UBD3 114 aa6.9□□□□□ -1.31
SRSF6-201ENST00000244020 ZFYVE26Q68DK2 2539 aa6.9□□□□□ -1.31
SRSF6-201ENST00000244020 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.31
SRSF6-201ENST00000244020 SLPIP03973 132 aa6.9□□□□□ -1.31
SRSF6-201ENST00000244020 CEMP1Q6PRD7 247 aaPredicted RBP6.9□□□□□ -1.31
SRSF6-201ENST00000244020 C5orf56Q8N8D9 126 aa6.9□□□□□ -1.31
SRSF6-201ENST00000244020 SIRPDQ9H106 197 aa6.9□□□□□ -1.31
SRSF6-201ENST00000244020 A0A087WVE0 104 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 IGHV1-69P01742 117 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 IGF2-ASQ6U949 168 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 ODF3Q96PU9 254 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 MDFICQ9P1T7 246 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 KIF25-AS1Q9Y6Z4 181 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 PKD1L2Q7Z442 2459 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 LINC00315P59091 139 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 DEFB131AP59861 70 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 RPL18AQ02543 176 aaKnown RBP6.89□□□□□ -1.31
SRSF6-201ENST00000244020 AMELXQ99217 191 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 BRD3OSQ6XYD6 125 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 C20orf203Q8NBC4 194 aa6.89□□□□□ -1.31
SRSF6-201ENST00000244020 H7C423 109 aa6.88□□□□□ -1.31
SRSF6-201ENST00000244020 Q6Q795 121 aa6.88□□□□□ -1.31
SRSF6-201ENST00000244020 AKAP13Q12802 2813 aa6.88□□□□□ -1.31
SRSF6-201ENST00000244020 PMAIP1Q13794 54 aa6.88□□□□□ -1.31
SRSF6-201ENST00000244020 SS18Q15532 418 aa6.88□□□□□ -1.31
SRSF6-201ENST00000244020 H0YGX0 51 aa6.87□□□□□ -1.31
SRSF6-201ENST00000244020 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.314e-10■■□□□ 11.7
SRSF6-201ENST00000244020 NREPQ16612 68 aa6.87□□□□□ -1.31
SRSF6-201ENST00000244020 Q6ZSV7 163 aa6.87□□□□□ -1.31
SRSF6-201ENST00000244020 NRGNQ92686 78 aa6.87□□□□□ -1.31
SRSF6-201ENST00000244020 ZNF292O60281 2723 aa6.87□□□□□ -1.31
SRSF6-201ENST00000244020 A0A096LPF7 62 aa6.87□□□□□ -1.31
SRSF6-201ENST00000244020 M0QY20 66 aa6.87□□□□□ -1.31
SRSF6-201ENST00000244020 NCR3O14931 201 aa6.87□□□□□ -1.31
SRSF6-201ENST00000244020 XCL1P47992 114 aa6.87□□□□□ -1.31
SRSF6-201ENST00000244020 IGLV4-3A0A075B6K6 122 aa6.87□□□□□ -1.31
SRSF6-201ENST00000244020 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
SRSF6-201ENST00000244020 USMG5Q96IX5 58 aa6.86□□□□□ -1.31
SRSF6-201ENST00000244020 TRBV6-5A0A0K0K1A5 114 aa6.86□□□□□ -1.31
SRSF6-201ENST00000244020 A8MZ25 164 aa6.86□□□□□ -1.31
SRSF6-201ENST00000244020 HIST2H2BCQ6DN03 193 aa6.86□□□□□ -1.31
SRSF6-201ENST00000244020 PRRC2AP48634 2157 aaKnown RBP6.86□□□□□ -1.31
SRSF6-201ENST00000244020 C4orf26Q17RF5 130 aa6.86□□□□□ -1.31
SRSF6-201ENST00000244020 BPESC1Q9GZL8 116 aa6.86□□□□□ -1.31
SRSF6-201ENST00000244020 MIR7-3HGQ8N6C7 128 aa6.85□□□□□ -1.31
SRSF6-201ENST00000244020 POM121L12Q8N7R1 296 aa6.85□□□□□ -1.31
SRSF6-201ENST00000244020 PIEZO1Q92508 2521 aa6.85□□□□□ -1.31
SRSF6-201ENST00000244020 KLLNB2CW77 178 aa6.85□□□□□ -1.31
SRSF6-201ENST00000244020 CDK2AP2O75956 126 aa6.85□□□□□ -1.31
SRSF6-201ENST00000244020 HIVEP2P31629 2446 aa6.85□□□□□ -1.31
SRSF6-201ENST00000244020 SMIM26A0A096LP01 95 aa6.85□□□□□ -1.31
SRSF6-201ENST00000244020 J3QLI3 93 aa6.85□□□□□ -1.31
SRSF6-201ENST00000244020 ADAMTSL4-AS1Q5T5F5 129 aa6.85□□□□□ -1.31
SRSF6-201ENST00000244020 VSIG2Q96IQ7 327 aa6.85□□□□□ -1.31
SRSF6-201ENST00000244020 IGHV1-58A0A0C4DH39 117 aa6.85□□□□□ -1.31
SRSF6-201ENST00000244020 ACANP16112 2415 aa6.84□□□□□ -1.31
SRSF6-201ENST00000244020 NDUFS5O43920 106 aa6.84□□□□□ -1.31
SRSF6-201ENST00000244020 A0A0J9YX75 114 aa6.84□□□□□ -1.31
SRSF6-201ENST00000244020 COX7A2LO14548 114 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms