RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MAP1AP78559 2803 aaPredicted RBP5.64□□□□□ -1.51
RIF1-201ENST00000243326 F8W735 103 aaPredicted RBP5.64□□□□□ -1.51
RIF1-201ENST00000243326 DSCR9P59020 149 aa5.64□□□□□ -1.51
RIF1-201ENST00000243326 IGLV4-3A0A075B6K6 122 aa5.64□□□□□ -1.51
RIF1-201ENST00000243326 FAM30AQ9NZY2 134 aa5.64□□□□□ -1.51
RIF1-201ENST00000243326 XAGE1AQ9HD64 81 aa5.64□□□□□ -1.51
RIF1-201ENST00000243326 TMEM223A0PJW6 202 aa5.64□□□□□ -1.51
RIF1-201ENST00000243326 NDUFC2O95298 119 aa5.64□□□□□ -1.51
RIF1-201ENST00000243326 ZNF22P17026 224 aaPredicted RBP5.64□□□□□ -1.51
RIF1-201ENST00000243326 CMC4P56277 68 aaPredicted RBP5.64□□□□□ -1.51
RIF1-201ENST00000243326 ATG2AQ2TAZ0 1938 aa5.64□□□□□ -1.51
RIF1-201ENST00000243326 Q6ZSR3 168 aa5.64□□□□□ -1.51
RIF1-201ENST00000243326 LINC00643Q86TS7 51 aa5.63□□□□□ -1.51
RIF1-201ENST00000243326 EIF4EBP1Q13541 118 aaPredicted RBP5.63□□□□□ -1.51
RIF1-201ENST00000243326 K7ENP7 123 aa5.63□□□□□ -1.51
RIF1-201ENST00000243326 FUSP35637 526 aaKnown RBP eCLIP5.63□□□□□ -1.51
RIF1-201ENST00000243326 HHLA3Q9XRX5 114 aa5.63□□□□□ -1.51
RIF1-201ENST00000243326 TRBV7-3A0A075B6L6 115 aa5.63□□□□□ -1.51
RIF1-201ENST00000243326 IGLV2-11P01706 119 aa5.63□□□□□ -1.51
RIF1-201ENST00000243326 PPDPFQ9H3Y8 114 aa5.63□□□□□ -1.51
RIF1-201ENST00000243326 APOC4P55056 127 aa5.62□□□□□ -1.51
RIF1-201ENST00000243326 VPREB3Q9UKI3 123 aa5.62□□□□□ -1.51
RIF1-201ENST00000243326 SOSTDC1Q6X4U4 206 aa5.62□□□□□ -1.51
RIF1-201ENST00000243326 LINC00308Q8TCZ7 52 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 IGKV2-28A0A075B6P5 120 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 IGKV2D-28P01615 120 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 COX7BP24311 80 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 NRACQ8N912 160 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 KAAG1Q9UBP8 84 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 UNC79Q9P2D8 2635 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 LINC00482Q8N8I6 264 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 A0A0J9YX75 114 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 H7C423 109 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 UQCRQO14949 82 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 IGLV1-47P01700 117 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 IGKV4-1P06312 121 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 TSHBP01222 138 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 H3BT86 120 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 TM2D2Q9BX73 214 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 DIRC1Q969H9 104 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 TSPEAR-AS2P59090 65 aa5.61□□□□□ -1.51
RIF1-201ENST00000243326 FAM19A5Q7Z5A7 132 aaPredicted RBP5.61□□□□□ -1.51
RIF1-201ENST00000243326 CELA1Q9UNI1 258 aa5.6□□□□□ -1.51
RIF1-201ENST00000243326 MAP6D1Q9H9H5 199 aa5.6□□□□□ -1.51
RIF1-201ENST00000243326 RNF138Q8WVD3 245 aa5.6□□□□□ -1.51
RIF1-201ENST00000243326 GCN1Q92616 2671 aaKnown RBP5.6□□□□□ -1.51
RIF1-201ENST00000243326 C19orf84I3L1E1 186 aa5.6□□□□□ -1.51
RIF1-201ENST00000243326 HIGD2AQ9BW72 106 aa5.6□□□□□ -1.51
RIF1-201ENST00000243326 U3KQK5 164 aa5.6□□□□□ -1.51
RIF1-201ENST00000243326 WFDC13Q8IUB5 93 aa5.6□□□□□ -1.51
RIF1-201ENST00000243326 Q6Q795 121 aa5.59□□□□□ -1.51
RIF1-201ENST00000243326 RETNLBQ9BQ08 111 aa5.59□□□□□ -1.51
RIF1-201ENST00000243326 CFAP126Q5VTH2 177 aa5.59□□□□□ -1.51
RIF1-201ENST00000243326 TRBV6-1A0A0K0K1D8 114 aa5.59□□□□□ -1.51
RIF1-201ENST00000243326 USP17L23D6RBM5 183 aa5.59□□□□□ -1.51
RIF1-201ENST00000243326 C1orf158Q8N1D5 194 aa5.59□□□□□ -1.51
RIF1-201ENST00000243326 SPRY4Q9C004 299 aa5.59□□□□□ -1.51
RIF1-201ENST00000243326 C9orf116Q5BN46 136 aaPredicted RBP5.59□□□□□ -1.51
RIF1-201ENST00000243326 C16orf74Q96GX8 76 aa5.59□□□□□ -1.51
RIF1-201ENST00000243326 ZFAND3Q9H8U3 227 aa5.59□□□□□ -1.51
RIF1-201ENST00000243326 CHCHD10Q8WYQ3 142 aaPredicted RBP5.59□□□□□ -1.51
RIF1-201ENST00000243326 CEP295Q9C0D2 2601 aa5.59□□□□□ -1.51
RIF1-201ENST00000243326 BPY2O14599 106 aa5.59□□□□□ -1.52
RIF1-201ENST00000243326 PLA2G2CQ5R387 149 aa5.59□□□□□ -1.52
RIF1-201ENST00000243326 IGFL3Q6UXB1 125 aa5.59□□□□□ -1.52
RIF1-201ENST00000243326 SMIM11BQ8TCY0 68 aa5.59□□□□□ -1.52
RIF1-201ENST00000243326 UBE2AP49459 152 aa5.58□□□□□ -1.52
RIF1-201ENST00000243326 TRBV6-5A0A0K0K1A5 114 aa5.58□□□□□ -1.52
RIF1-201ENST00000243326 H0YGX0 51 aa5.58□□□□□ -1.52
RIF1-201ENST00000243326 ZFAND2AQ8N6M9 145 aa5.58□□□□□ -1.52
RIF1-201ENST00000243326 MP68P56378 58 aa5.58□□□□□ -1.52
RIF1-201ENST00000243326 RAI1Q7Z5J4 1906 aaPredicted RBP5.58□□□□□ -1.52
RIF1-201ENST00000243326 RETNQ9HD89 108 aa5.58□□□□□ -1.52
RIF1-201ENST00000243326 NDUFA1O15239 70 aa5.57□□□□□ -1.52
RIF1-201ENST00000243326 RPL37AP8A6NKH3 93 aa5.57□□□□□ -1.52
RIF1-201ENST00000243326 PIP4P1Q86T03 277 aa5.57□□□□□ -1.52
RIF1-201ENST00000243326 COX6A2Q02221 97 aa5.57□□□□□ -1.52
RIF1-201ENST00000243326 TMEM256-PLSCR3K7ERE1 68 aa5.57□□□□□ -1.52
RIF1-201ENST00000243326 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.57□□□□□ -1.52
RIF1-201ENST00000243326 TRBV10-1A0A0K0K1A3 114 aa5.57□□□□□ -1.52
RIF1-201ENST00000243326 DNAJC9-AS1A6NH13 148 aa5.57□□□□□ -1.52
RIF1-201ENST00000243326 HILS1P60008 231 aa5.57□□□□□ -1.52
RIF1-201ENST00000243326 REG3AQ06141 175 aa5.57□□□□□ -1.52
RIF1-201ENST00000243326 LENEPQ9Y5L5 61 aa5.57□□□□□ -1.52
RIF1-201ENST00000243326 A6NDX4 124 aa5.56□□□□□ -1.52
RIF1-201ENST00000243326 SPANXDQ9BXN6 97 aa5.56□□□□□ -1.52
RIF1-201ENST00000243326 FLNBO75369 2602 aaKnown RBP5.56□□□□□ -1.52
RIF1-201ENST00000243326 A0A087WYN8 130 aa5.56□□□□□ -1.52
RIF1-201ENST00000243326 MYCNOSP40205 109 aa5.56□□□□□ -1.52
RIF1-201ENST00000243326 COL6A5A8TX70 2615 aa5.56□□□□□ -1.52
RIF1-201ENST00000243326 M0QY20 66 aa5.56□□□□□ -1.52
RIF1-201ENST00000243326 TIMM17BO60830 172 aa5.56□□□□□ -1.52
RIF1-201ENST00000243326 NDUFC2-KCTD14E9PQ53 114 aa5.55□□□□□ -1.52
RIF1-201ENST00000243326 SPART-AS1P0CW21 52 aa5.55□□□□□ -1.52
RIF1-201ENST00000243326 V9GYY9 64 aa5.55□□□□□ -1.52
RIF1-201ENST00000243326 RNASE3P12724 160 aaKnown RBP5.55□□□□□ -1.52
RIF1-201ENST00000243326 DAZAP2Q15038 168 aaPredicted RBP5.55□□□□□ -1.52
RIF1-201ENST00000243326 PSPHP1O15172 72 aa5.55□□□□□ -1.52
RIF1-201ENST00000243326 SPINK6Q6UWN8 80 aa5.55□□□□□ -1.52
RIF1-201ENST00000243326 FAM19A1Q7Z5A9 133 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms