RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 C10orf126Q8N4M7 172 aa7.79□□□□□ -1.16
TNFAIP3-201ENST00000237289 IFITM10A6NMD0 228 aa7.79□□□□□ -1.16
TNFAIP3-201ENST00000237289 PMCHL1Q16048 86 aa7.79□□□□□ -1.16
TNFAIP3-201ENST00000237289 Q9HAA7 133 aa7.79□□□□□ -1.16
TNFAIP3-201ENST00000237289 LINC00315P59091 139 aa7.79□□□□□ -1.16
TNFAIP3-201ENST00000237289 Q0VG73 95 aa7.79□□□□□ -1.16
TNFAIP3-201ENST00000237289 SS18Q15532 418 aa7.79□□□□□ -1.16
TNFAIP3-201ENST00000237289 IGLV2-18A0A075B6J9 118 aa7.78□□□□□ -1.16
TNFAIP3-201ENST00000237289 LYPD5Q6UWN5 251 aa7.78□□□□□ -1.16
TNFAIP3-201ENST00000237289 NRACQ8N912 160 aa7.78□□□□□ -1.16
TNFAIP3-201ENST00000237289 TRAV13-1A0A0B4J241 112 aa7.78□□□□□ -1.16
TNFAIP3-201ENST00000237289 GAS8-AS1O95177 125 aa7.78□□□□□ -1.16
TNFAIP3-201ENST00000237289 FGF6P10767 208 aa7.78□□□□□ -1.16
TNFAIP3-201ENST00000237289 TTC32Q5I0X7 151 aa7.78□□□□□ -1.16
TNFAIP3-201ENST00000237289 KLK12Q9UKR0 248 aa7.78□□□□□ -1.16
TNFAIP3-201ENST00000237289 TRBV27A0A0K0K1C4 114 aa7.78□□□□□ -1.16
TNFAIP3-201ENST00000237289 CLPSL2Q6UWE3 100 aa7.77□□□□□ -1.16
TNFAIP3-201ENST00000237289 POLR2KP53803 58 aaKnown RBP7.77□□□□□ -1.17
TNFAIP3-201ENST00000237289 PMCHL2Q9BQD1 86 aa7.77□□□□□ -1.17
TNFAIP3-201ENST00000237289 NAA38Q9BRA0 125 aaKnown RBP7.77□□□□□ -1.17
TNFAIP3-201ENST00000237289 IGKV2D-24A0A075B6R9 120 aa7.77□□□□□ -1.17
TNFAIP3-201ENST00000237289 MALP21145 153 aa7.77□□□□□ -1.17
TNFAIP3-201ENST00000237289 SPANXA1Q9NS26 97 aa7.76□□□□□ -1.17
TNFAIP3-201ENST00000237289 NMUP48645 174 aa7.76□□□□□ -1.17
TNFAIP3-201ENST00000237289 C1orf43Q9BWL3 253 aa7.76□□□□□ -1.17
TNFAIP3-201ENST00000237289 RPL32P62910 135 aaKnown RBP7.76□□□□□ -1.17
TNFAIP3-201ENST00000237289 ESRGQ1W209 222 aa7.76□□□□□ -1.17
TNFAIP3-201ENST00000237289 Q6ZVH6 145 aa7.76□□□□□ -1.17
TNFAIP3-201ENST00000237289 C20orf203Q8NBC4 194 aa7.76□□□□□ -1.17
TNFAIP3-201ENST00000237289 PKD1L1Q8TDX9 2849 aa7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 UFSP1Q6NVU6 142 aa7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 IFI27L1Q96BM0 104 aa7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 TMEM141Q96I45 108 aa7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 Q9H8V8 135 aa7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 H7C423 109 aa7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 M0R2N4 97 aa7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 SEC11AP67812 179 aa7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 ZNF575Q86XF7 245 aa7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 RPL39P62891 51 aaKnown RBP7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 SLC25A34Q6PIV7 304 aa7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 YPEL4Q96NS1 127 aa7.75□□□□□ -1.17
TNFAIP3-201ENST00000237289 TM2D2Q9BX73 214 aa7.74□□□□□ -1.17
TNFAIP3-201ENST00000237289 Q9UF83 564 aa7.74□□□□□ -1.17
TNFAIP3-201ENST00000237289 TSHBP01222 138 aa7.74□□□□□ -1.17
TNFAIP3-201ENST00000237289 RNASE13Q5GAN3 156 aaKnown RBP7.74□□□□□ -1.17
TNFAIP3-201ENST00000237289 HERVK_113P61574 105 aa7.73□□□□□ -1.17
TNFAIP3-201ENST00000237289 Q8N976 141 aa7.73□□□□□ -1.17
TNFAIP3-201ENST00000237289 MRPS16Q9Y3D3 137 aaKnown RBP7.73□□□□□ -1.17
TNFAIP3-201ENST00000237289 TRAV8-3A0A0A6YYJ7 113 aa7.72□□□□□ -1.17
TNFAIP3-201ENST00000237289 H3BRM9 83 aa7.72□□□□□ -1.17
TNFAIP3-201ENST00000237289 RBX1P62877 108 aa7.72□□□□□ -1.17
TNFAIP3-201ENST00000237289 TMEM170BQ5T4T1 132 aa7.72□□□□□ -1.17
TNFAIP3-201ENST00000237289 GCSHP23434 173 aa7.72□□□□□ -1.17
TNFAIP3-201ENST00000237289 LINC00269Q8N2A0 174 aa7.72□□□□□ -1.17
TNFAIP3-201ENST00000237289 IGLV10-54A0A075B6I4 117 aa7.72□□□□□ -1.17
TNFAIP3-201ENST00000237289 A6NDN8 102 aa7.72□□□□□ -1.17
TNFAIP3-201ENST00000237289 WFDC10BQ8IUB3 73 aa7.72□□□□□ -1.17
TNFAIP3-201ENST00000237289 CHCHD7Q9BUK0 85 aa7.72□□□□□ -1.17
TNFAIP3-201ENST00000237289 PRSS2P07478 247 aa7.71□□□□□ -1.17
TNFAIP3-201ENST00000237289 SCGB1C2P0DMR2 95 aa7.71□□□□□ -1.17
TNFAIP3-201ENST00000237289 CASC10Q5T4H9 136 aa7.71□□□□□ -1.17
TNFAIP3-201ENST00000237289 APLNQ9ULZ1 77 aa7.71□□□□□ -1.18
TNFAIP3-201ENST00000237289 LINC00588Q9Y4M8 146 aa7.71□□□□□ -1.18
TNFAIP3-201ENST00000237289 TIRAPP58753 221 aa7.71□□□□□ -1.18
TNFAIP3-201ENST00000237289 REG3AQ06141 175 aa7.71□□□□□ -1.18
TNFAIP3-201ENST00000237289 PMVKQ15126 192 aa7.71□□□□□ -1.18
TNFAIP3-201ENST00000237289 CHTOPQ9Y3Y2 248 aaKnown RBP7.71□□□□□ -1.18
TNFAIP3-201ENST00000237289 XCL1P47992 114 aa7.7□□□□□ -1.18
TNFAIP3-201ENST00000237289 TOMM7Q9P0U1 55 aa7.7□□□□□ -1.18
TNFAIP3-201ENST00000237289 APOMO95445 188 aa7.7□□□□□ -1.18
TNFAIP3-201ENST00000237289 MPV17L2Q567V2 206 aa7.7□□□□□ -1.18
TNFAIP3-201ENST00000237289 COX11Q9Y6N1 276 aa7.7□□□□□ -1.18
TNFAIP3-201ENST00000237289 TOMM6Q96B49 74 aa7.7□□□□□ -1.18
TNFAIP3-201ENST00000237289 H3BUT2 72 aa7.7□□□□□ -1.18
TNFAIP3-201ENST00000237289 NFE4Q86UQ8 179 aa7.7□□□□□ -1.18
TNFAIP3-201ENST00000237289 CFAP161Q6P656 301 aa7.69□□□□□ -1.18
TNFAIP3-201ENST00000237289 FABP2P12104 132 aa7.69□□□□□ -1.18
TNFAIP3-201ENST00000237289 TIMM17AQ99595 171 aa7.69□□□□□ -1.18
TNFAIP3-201ENST00000237289 UBE2V1Q13404 147 aa7.68□□□□□ -1.18
TNFAIP3-201ENST00000237289 PRSS47A8MTI9 375 aa7.68□□□□□ -1.18
TNFAIP3-201ENST00000237289 Q6ZUT4 128 aa7.68□□□□□ -1.18
TNFAIP3-201ENST00000237289 MIAQ16674 131 aa7.67□□□□□ -1.18
TNFAIP3-201ENST00000237289 LGALS9CQ6DKI2 356 aa7.67□□□□□ -1.18
TNFAIP3-201ENST00000237289 NTM-AS1Q6ZSK4 140 aa7.67□□□□□ -1.18
TNFAIP3-201ENST00000237289 OPRPNQ99935 248 aaPredicted RBP7.67□□□□□ -1.18
TNFAIP3-201ENST00000237289 SFTA2Q6UW10 78 aa7.67□□□□□ -1.18
TNFAIP3-201ENST00000237289 STAB2Q8WWQ8 2551 aa7.67□□□□□ -1.18
TNFAIP3-201ENST00000237289 ZNF561-AS1K7EIQ3 104 aa7.67□□□□□ -1.18
TNFAIP3-201ENST00000237289 Q1RN00 199 aa7.67□□□□□ -1.18
TNFAIP3-201ENST00000237289 TIMM21Q9BVV7 248 aa7.67□□□□□ -1.18
TNFAIP3-201ENST00000237289 LINC01556Q5JQF7 62 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 K7EP13 123 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 HERVK_113P63121 156 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 PET117Q6UWS5 81 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 STPG4Q8N801 248 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 UBE2D4Q9Y2X8 147 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 TRAV8-4A0A0B4J246 113 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 LOC107984156A0A0G2JMH3 177 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 A0A1B0GV72 72 aa7.66□□□□□ -1.18
TNFAIP3-201ENST00000237289 CCL25O15444 150 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms