RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 NKAPP1Q8N9T2 125 aa9.41□□□□□ -0.9
VAMP4-201ENST00000236192 RP1L1Q8IWN7 2480 aaPredicted RBP9.41□□□□□ -0.9
VAMP4-201ENST00000236192 KLLNB2CW77 178 aa9.41□□□□□ -0.9
VAMP4-201ENST00000236192 MED13Q9UHV7 2174 aa9.41□□□□□ -0.9
VAMP4-201ENST00000236192 PRR4Q16378 134 aa9.4□□□□□ -0.9
VAMP4-201ENST00000236192 MAP1BP46821 2468 aaKnown RBP9.4□□□□□ -0.91
VAMP4-201ENST00000236192 LY6LH3BQJ8 138 aa9.4□□□□□ -0.91
VAMP4-201ENST00000236192 LINC00474Q9P2X8 69 aa9.4□□□□□ -0.91
VAMP4-201ENST00000236192 Q6ZVQ6 151 aa9.39□□□□□ -0.91
VAMP4-201ENST00000236192 SMIM1B2RUZ4 78 aa9.39□□□□□ -0.91
VAMP4-201ENST00000236192 FAM30AQ9NZY2 134 aa9.39□□□□□ -0.91
VAMP4-201ENST00000236192 TET2Q6N021 2002 aaPredicted RBP9.39□□□□□ -0.91
VAMP4-201ENST00000236192 A0A087WZ39 114 aa9.39□□□□□ -0.91
VAMP4-201ENST00000236192 FAM215AQ9Y5M1 114 aa9.39□□□□□ -0.91
VAMP4-201ENST00000236192 TRBV6-4A0A1B0GX49 114 aa9.38□□□□□ -0.91
VAMP4-201ENST00000236192 FAM218AQ96MZ4 157 aa9.38□□□□□ -0.91
VAMP4-201ENST00000236192 LINC00242Q5T6M2 205 aa9.38□□□□□ -0.91
VAMP4-201ENST00000236192 C5orf56Q8N8D9 126 aa9.38□□□□□ -0.91
VAMP4-201ENST00000236192 Q8N2B8 174 aa9.38□□□□□ -0.91
VAMP4-201ENST00000236192 PROK1P58294 105 aa9.38□□□□□ -0.91
VAMP4-201ENST00000236192 NOP10Q9NPE3 64 aaKnown RBP9.37□□□□□ -0.91
VAMP4-201ENST00000236192 CDK2AP2O75956 126 aa9.37□□□□□ -0.91
VAMP4-201ENST00000236192 DEFB130BP0DP73 79 aa9.37□□□□□ -0.91
VAMP4-201ENST00000236192 DEFB130AP0DP74 79 aa9.37□□□□□ -0.91
VAMP4-201ENST00000236192 ANGP03950 147 aaKnown RBP9.37□□□□□ -0.91
VAMP4-201ENST00000236192 Q6ZQY7 126 aa9.36□□□□□ -0.91
VAMP4-201ENST00000236192 ODF3BA8MYP8 253 aa9.36□□□□□ -0.91
VAMP4-201ENST00000236192 KLKP1Q107X0 134 aa9.36□□□□□ -0.91
VAMP4-201ENST00000236192 LITAFQ99732 161 aa9.36□□□□□ -0.91
VAMP4-201ENST00000236192 COX6A2Q02221 97 aa9.35□□□□□ -0.91
VAMP4-201ENST00000236192 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
VAMP4-201ENST00000236192 H7BZZ5 65 aa9.35□□□□□ -0.91
VAMP4-201ENST00000236192 KIF25-AS1Q9Y6Z4 181 aa9.34□□□□□ -0.91
VAMP4-201ENST00000236192 HTN3P15516 51 aa9.34□□□□□ -0.91
VAMP4-201ENST00000236192 LINC00337Q8N6G1 96 aa9.34□□□□□ -0.92
VAMP4-201ENST00000236192 MALRD1Q5VYJ5 2156 aa9.33□□□□□ -0.92
VAMP4-201ENST00000236192 CEP192Q8TEP8 1941 aa9.33□□□□□ -0.92
VAMP4-201ENST00000236192 MRGPRG-AS1Q2M3A8 158 aa9.33□□□□□ -0.92
VAMP4-201ENST00000236192 CCL19Q99731 98 aa9.33□□□□□ -0.92
VAMP4-201ENST00000236192 LIMD2Q9BT23 127 aa9.33□□□□□ -0.92
VAMP4-201ENST00000236192 VPREB1P12018 145 aa9.32□□□□□ -0.92
VAMP4-201ENST00000236192 CELA1Q9UNI1 258 aa9.32□□□□□ -0.92
VAMP4-201ENST00000236192 PTPRBP23467 1997 aa9.32□□□□□ -0.92
VAMP4-201ENST00000236192 NAV3Q8IVL0 2385 aa9.32□□□□□ -0.92
VAMP4-201ENST00000236192 F8W735 103 aaPredicted RBP9.32□□□□□ -0.92
VAMP4-201ENST00000236192 LRP4O75096 1905 aa9.31□□□□□ -0.92
VAMP4-201ENST00000236192 CADP27708 2225 aa9.31□□□□□ -0.92
VAMP4-201ENST00000236192 TRAV10A0A0B4J240 114 aa9.31□□□□□ -0.92
VAMP4-201ENST00000236192 APRG1Q8IVJ8 170 aa9.31□□□□□ -0.92
VAMP4-201ENST00000236192 NANOS2P60321 138 aaKnown RBP9.31□□□□□ -0.92
VAMP4-201ENST00000236192 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.31□□□□□ -0.92
VAMP4-201ENST00000236192 PRR15Q8IV56 129 aa9.31□□□□□ -0.92
VAMP4-201ENST00000236192 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
VAMP4-201ENST00000236192 ARHGAP32A7KAX9 2087 aa9.31□□□□□ -0.92
VAMP4-201ENST00000236192 C3orf84H3BNL1 204 aa9.3□□□□□ -0.92
VAMP4-201ENST00000236192 ZNF843Q8N446 348 aa9.3□□□□□ -0.92
VAMP4-201ENST00000236192 BPESC1Q9GZL8 116 aa9.3□□□□□ -0.92
VAMP4-201ENST00000236192 IGLV5-39A0A0G2JS06 123 aa9.29□□□□□ -0.92
VAMP4-201ENST00000236192 DEFB123Q8N688 67 aa9.29□□□□□ -0.92
VAMP4-201ENST00000236192 C16orf74Q96GX8 76 aa9.29□□□□□ -0.92
VAMP4-201ENST00000236192 CDC42SE2Q9NRR3 84 aa9.29□□□□□ -0.92
VAMP4-201ENST00000236192 CEP290O15078 2479 aa9.29□□□□□ -0.92
VAMP4-201ENST00000236192 ROS1P08922 2347 aa9.29□□□□□ -0.92
VAMP4-201ENST00000236192 LINC00315P59091 139 aa9.29□□□□□ -0.92
VAMP4-201ENST00000236192 HIGD2AQ9BW72 106 aa9.29□□□□□ -0.92
VAMP4-201ENST00000236192 IGLV10-54A0A075B6I4 117 aa9.28□□□□□ -0.92
VAMP4-201ENST00000236192 LINC00269Q8N2A0 174 aa9.28□□□□□ -0.92
VAMP4-201ENST00000236192 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
VAMP4-201ENST00000236192 SPAG11BQ08648 103 aa9.28□□□□□ -0.92
VAMP4-201ENST00000236192 COX17Q14061 63 aa9.28□□□□□ -0.92
VAMP4-201ENST00000236192 ERC2-IT1O76042 136 aa9.28□□□□□ -0.92
VAMP4-201ENST00000236192 SEM1Q6ZVN7 128 aa9.28□□□□□ -0.92
VAMP4-201ENST00000236192 TM2D3Q9BRN9 247 aa9.27□□□□□ -0.92
VAMP4-201ENST00000236192 K7EQG2 157 aa9.27□□□□□ -0.93
VAMP4-201ENST00000236192 CASC2Q6XLA1 102 aa9.27□□□□□ -0.93
VAMP4-201ENST00000236192 COL4A2P08572 1712 aa9.27□□□□□ -0.93
VAMP4-201ENST00000236192 A0A096LPF7 62 aa9.26□□□□□ -0.93
VAMP4-201ENST00000236192 ETDCA0A1B0GVM5 59 aa9.26□□□□□ -0.93
VAMP4-201ENST00000236192 EIF4EBP3O60516 100 aaPredicted RBP9.26□□□□□ -0.93
VAMP4-201ENST00000236192 PRRC2AP48634 2157 aaKnown RBP9.26□□□□□ -0.93
VAMP4-201ENST00000236192 K7ENP7 123 aa9.25□□□□□ -0.93
VAMP4-201ENST00000236192 DOPEY2Q9Y3R5 2298 aa9.25□□□□□ -0.93
VAMP4-201ENST00000236192 IGFL3Q6UXB1 125 aa9.25□□□□□ -0.93
VAMP4-201ENST00000236192 Q6ZTI0 123 aa9.25□□□□□ -0.93
VAMP4-201ENST00000236192 PKDREJQ9NTG1 2253 aa9.25□□□□□ -0.93
VAMP4-201ENST00000236192 GYPEP15421 78 aa9.25□□□□□ -0.93
VAMP4-201ENST00000236192 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
VAMP4-201ENST00000236192 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
VAMP4-201ENST00000236192 IGFL2Q6UWQ7 119 aa9.23□□□□□ -0.93
VAMP4-201ENST00000236192 MUC7Q8TAX7 377 aa9.23□□□□□ -0.93
VAMP4-201ENST00000236192 IGLV5-45A0A087WSX0 123 aa9.23□□□□□ -0.93
VAMP4-201ENST00000236192 RNF223E7ERA6 249 aa9.23□□□□□ -0.93
VAMP4-201ENST00000236192 CDSNQ15517 529 aa9.23□□□□□ -0.93
VAMP4-201ENST00000236192 BEAN1Q3B7T3 259 aa9.22□□□□□ -0.93
VAMP4-201ENST00000236192 SERTAD4-AS1Q5TG53 156 aa9.22□□□□□ -0.93
VAMP4-201ENST00000236192 LINC00575Q6W349 94 aa9.22□□□□□ -0.93
VAMP4-201ENST00000236192 Q8IZM0 81 aa9.22□□□□□ -0.93
VAMP4-201ENST00000236192 LOC110117498A0A087WWA1 95 aa9.22□□□□□ -0.93
VAMP4-201ENST00000236192 Q6ZQT0 140 aa9.22□□□□□ -0.93
VAMP4-201ENST00000236192 WFDC10BQ8IUB3 73 aa9.22□□□□□ -0.93
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