RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 SPANXA1Q9NS26 97 aa12.86□□□□□ -0.35
SNX17-201ENST00000233575 CST9LQ9H4G1 147 aa12.85□□□□□ -0.35
SNX17-201ENST00000233575 hDV102S1A0JD36 115 aa12.84□□□□□ -0.35
SNX17-201ENST00000233575 UBE2L6O14933 153 aa12.84□□□□□ -0.35
SNX17-201ENST00000233575 PMVKQ15126 192 aa12.84□□□□□ -0.35
SNX17-201ENST00000233575 CHCHD5Q9BSY4 110 aa12.84□□□□□ -0.35
SNX17-201ENST00000233575 CHTOPQ9Y3Y2 248 aaKnown RBP12.84□□□□□ -0.35
SNX17-201ENST00000233575 TRAV9-2A0A087WT02 112 aa12.83□□□□□ -0.36
SNX17-201ENST00000233575 TRAV10A0A0B4J240 114 aa12.83□□□□□ -0.36
SNX17-201ENST00000233575 H3BNG1 76 aa12.83□□□□□ -0.36
SNX17-201ENST00000233575 EREGO14944 169 aa12.83□□□□□ -0.36
SNX17-201ENST00000233575 ANKRD39Q53RE8 183 aa12.83□□□□□ -0.36
SNX17-201ENST00000233575 TMEM97Q5BJF2 176 aa12.83□□□□□ -0.36
SNX17-201ENST00000233575 F8VRH5 84 aa12.83□□□□□ -0.36
SNX17-201ENST00000233575 MRPL52Q86TS9 123 aaKnown RBP12.83□□□□□ -0.36
SNX17-201ENST00000233575 TIMM21Q9BVV7 248 aa12.83□□□□□ -0.36
SNX17-201ENST00000233575 VCX2Q9H322 139 aa12.83□□□□□ -0.36
SNX17-201ENST00000233575 SPATA45Q537H7 98 aa12.82□□□□□ -0.36
SNX17-201ENST00000233575 DGAT2L7PQ6IED9 249 aa12.82□□□□□ -0.36
SNX17-201ENST00000233575 AMELXQ99217 191 aa12.82□□□□□ -0.36
SNX17-201ENST00000233575 IGLV4-69A0A075B6H9 119 aa12.81□□□□□ -0.36
SNX17-201ENST00000233575 M0R143 59 aa12.81□□□□□ -0.36
SNX17-201ENST00000233575 NHLRC4P0CG21 123 aaPredicted RBP12.81□□□□□ -0.36
SNX17-201ENST00000233575 IGKCP01834 107 aa12.81□□□□□ -0.36
SNX17-201ENST00000233575 TCTAP57738 103 aa12.81□□□□□ -0.36
SNX17-201ENST00000233575 AMMECR1LQ6DCA0 310 aa12.81□□□□□ -0.36
SNX17-201ENST00000233575 SNHG12Q9BXW3 62 aa12.81□□□□□ -0.36
SNX17-201ENST00000233575 IGLV4-60A0A075B6I1 120 aa12.8□□□□□ -0.36
SNX17-201ENST00000233575 DPM2O94777 84 aa12.8□□□□□ -0.36
SNX17-201ENST00000233575 LYPD5Q6UWN5 251 aa12.8□□□□□ -0.36
SNX17-201ENST00000233575 STPG4Q8N801 248 aa12.8□□□□□ -0.36
SNX17-201ENST00000233575 H7C423 109 aa12.79□□□□□ -0.36
SNX17-201ENST00000233575 MRPS36P82909 103 aaKnown RBP12.79□□□□□ -0.36
SNX17-201ENST00000233575 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
SNX17-201ENST00000233575 Q8N3U1 123 aa12.79□□□□□ -0.36
SNX17-201ENST00000233575 OR5A1Q8NGJ0 315 aa12.79□□□□□ -0.36
SNX17-201ENST00000233575 CDC42SE2Q9NRR3 84 aa12.79□□□□□ -0.36
SNX17-201ENST00000233575 CSDC2Q9Y534 153 aaKnown RBP12.79□□□□□ -0.36
SNX17-201ENST00000233575 TMEM262E9PQX1 116 aa12.78□□□□□ -0.36
SNX17-201ENST00000233575 NPSP0C0P6 89 aa12.78□□□□□ -0.36
SNX17-201ENST00000233575 MPV17L2Q567V2 206 aa12.78□□□□□ -0.36
SNX17-201ENST00000233575 PAPPA-AS1Q5QFB9 102 aa12.78□□□□□ -0.36
SNX17-201ENST00000233575 C11orf86A6NJI1 115 aa12.78□□□□□ -0.36
SNX17-201ENST00000233575 DLEU1O43261 78 aa12.78□□□□□ -0.36
SNX17-201ENST00000233575 ZNF25P17030 456 aaPredicted RBP12.78□□□□□ -0.36
SNX17-201ENST00000233575 A0A0J9YXV3 536 aa12.77□□□□□ -0.37
SNX17-201ENST00000233575 HSBP1L1C9JCN9 74 aa12.77□□□□□ -0.37
SNX17-201ENST00000233575 LELP1Q5T871 98 aa12.77□□□□□ -0.37
SNX17-201ENST00000233575 FBN3Q75N90 2809 aa12.76□□□□□ -0.37
SNX17-201ENST00000233575 PLNP26678 52 aa12.76□□□□□ -0.37
SNX17-201ENST00000233575 TMEM101Q96IK0 257 aa12.76□□□□□ -0.37
SNX17-201ENST00000233575 ESRGQ1W209 222 aa12.76□□□□□ -0.37
SNX17-201ENST00000233575 PCP4P48539 62 aa12.75□□□□□ -0.37
SNX17-201ENST00000233575 RBX1P62877 108 aa12.75□□□□□ -0.37
SNX17-201ENST00000233575 DYNC2H1Q8NCM8 4307 aaKnown RBP12.75□□□□□ -0.37
SNX17-201ENST00000233575 IGLL5B9A064 214 aa12.74□□□□□ -0.37
SNX17-201ENST00000233575 CSMD3Q7Z407 3707 aa12.74□□□□□ -0.37
SNX17-201ENST00000233575 SMAGPQ0VAQ4 97 aa12.74□□□□□ -0.37
SNX17-201ENST00000233575 CHAC1Q9BUX1 264 aa12.74□□□□□ -0.37
SNX17-201ENST00000233575 UBE2D1P51668 147 aa12.73□□□□□ -0.37
SNX17-201ENST00000233575 TP73-AS1Q9UF72 201 aa12.73□□□□□ -0.37
SNX17-201ENST00000233575 DNAH7Q8WXX0 4024 aa12.73□□□□□ -0.37
SNX17-201ENST00000233575 TRAV13-1A0A0B4J241 112 aa12.72□□□□□ -0.37
SNX17-201ENST00000233575 IGLC3P0DOY3 106 aa12.72□□□□□ -0.37
SNX17-201ENST00000233575 NFE4Q86UQ8 179 aa12.72□□□□□ -0.37
SNX17-201ENST00000233575 IGKV3OR2-268A0A0C4DH90 116 aa12.72□□□□□ -0.37
SNX17-201ENST00000233575 A0A1B0GUV1 79 aa12.72□□□□□ -0.37
SNX17-201ENST00000233575 TIRAPP58753 221 aa12.72□□□□□ -0.37
SNX17-201ENST00000233575 IGKV2D-26A0A0A0MRZ7 120 aa12.71□□□□□ -0.37
SNX17-201ENST00000233575 WFDC10BQ8IUB3 73 aa12.71□□□□□ -0.37
SNX17-201ENST00000233575 C15orf53Q8NAA6 179 aa12.71□□□□□ -0.38
SNX17-201ENST00000233575 MIEN1Q9BRT3 115 aa12.71□□□□□ -0.38
SNX17-201ENST00000233575 C21orf62-AS1Q17RA5 79 aa12.7□□□□□ -0.38
SNX17-201ENST00000233575 TMEM170BQ5T4T1 132 aa12.7□□□□□ -0.38
SNX17-201ENST00000233575 CLPSL2Q6UWE3 100 aa12.7□□□□□ -0.38
SNX17-201ENST00000233575 ZNF22P17026 224 aaPredicted RBP12.69□□□□□ -0.38
SNX17-201ENST00000233575 COX6A2Q02221 97 aa12.69□□□□□ -0.38
SNX17-201ENST00000233575 LINC00242Q5T6M2 205 aa12.69□□□□□ -0.38
SNX17-201ENST00000233575 LYSTQ99698 3801 aa12.69□□□□□ -0.38
SNX17-201ENST00000233575 PLECQ15149 4684 aaKnown RBP12.68□□□□□ -0.38
SNX17-201ENST00000233575 UQCR10Q9UDW1 63 aa12.68□□□□□ -0.38
SNX17-201ENST00000233575 TRAV8-6A0A0B4J262 113 aa12.67□□□□□ -0.38
SNX17-201ENST00000233575 TINCRA0A1B0GVN0 87 aa12.67□□□□□ -0.38
SNX17-201ENST00000233575 NMUP48645 174 aa12.67□□□□□ -0.38
SNX17-201ENST00000233575 TTTY13Q9BZ97 58 aa12.67□□□□□ -0.38
SNX17-201ENST00000233575 STARD9Q9P2P6 4700 aa12.67□□□□□ -0.38
SNX17-201ENST00000233575 ANGP03950 147 aaKnown RBP12.67□□□□□ -0.38
SNX17-201ENST00000233575 LINC00269Q8N2A0 174 aa12.67□□□□□ -0.38
SNX17-201ENST00000233575 IGHV3-30P01768 117 aa12.66□□□□□ -0.38
SNX17-201ENST00000233575 IGHV3-33P01772 117 aa12.66□□□□□ -0.38
SNX17-201ENST00000233575 IGHV3-30-3P0DP02 117 aa12.66□□□□□ -0.38
SNX17-201ENST00000233575 IGHV3-30-5P0DP03 117 aa12.66□□□□□ -0.38
SNX17-201ENST00000233575 PCP2Q8IVA1 136 aa12.66□□□□□ -0.38
SNX17-201ENST00000233575 FAM19A3Q7Z5A8 133 aa12.65□□□□□ -0.38
SNX17-201ENST00000233575 GEMIN7Q9H840 131 aaKnown RBP12.65□□□□□ -0.38
SNX17-201ENST00000233575 CDKN2A-AS1Q9UH64 79 aa12.65□□□□□ -0.38
SNX17-201ENST00000233575 LINC00588Q9Y4M8 146 aa12.65□□□□□ -0.38
SNX17-201ENST00000233575 IGHV3-64A0A075B6Q5 118 aa12.64□□□□□ -0.39
SNX17-201ENST00000233575 LINC00959A0A1B0GUT2 108 aa12.64□□□□□ -0.39
SNX17-201ENST00000233575 TMEM223A0PJW6 202 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 364.7 ms