RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 AVPP01185 164 aa10.27□□□□□ -0.77
SF1-201ENST00000227503 MSMBP08118 114 aa10.27□□□□□ -0.77
SF1-201ENST00000227503 Q9HAA7 133 aa10.27□□□□□ -0.77
SF1-201ENST00000227503 LRRK2Q5S007 2527 aa10.27□□□□□ -0.77
SF1-201ENST00000227503 MRPS36P82909 103 aaKnown RBP10.27□□□□□ -0.77
SF1-201ENST00000227503 GAGE2AQ6NT46 116 aa10.27□□□□□ -0.77
SF1-201ENST00000227503 USP9YO00507 2555 aaPredicted RBP10.26□□□□□ -0.77
SF1-201ENST00000227503 TRAV13-1A0A0B4J241 112 aa10.26□□□□□ -0.77
SF1-201ENST00000227503 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.26□□□□□ -0.77
SF1-201ENST00000227503 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
SF1-201ENST00000227503 CDKN2A-AS1Q9UH64 79 aa10.26□□□□□ -0.77
SF1-201ENST00000227503 ZANQ9Y493 2812 aa10.26□□□□□ -0.77
SF1-201ENST00000227503 C9orf85Q96MD7 179 aa10.26□□□□□ -0.77
SF1-201ENST00000227503 FAM218AQ96MZ4 157 aa10.26□□□□□ -0.77
SF1-201ENST00000227503 UQCRQO14949 82 aa10.25□□□□□ -0.77
SF1-201ENST00000227503 SDIM1Q6ZPB5 146 aa10.25□□□□□ -0.77
SF1-201ENST00000227503 PSMB8P28062 276 aa10.24□□□□□ -0.77
SF1-201ENST00000227503 TIRAPP58753 221 aa10.24□□□□□ -0.77
SF1-201ENST00000227503 SMIM9A6NGZ8 99 aa10.24□□□□□ -0.77
SF1-201ENST00000227503 SOSTDC1Q6X4U4 206 aa10.24□□□□□ -0.77
SF1-201ENST00000227503 LINC00526Q96FQ7 95 aa10.24□□□□□ -0.77
SF1-201ENST00000227503 BAALC-AS2P0C853 105 aa10.24□□□□□ -0.77
SF1-201ENST00000227503 LINC00643Q86TS7 51 aa10.24□□□□□ -0.77
SF1-201ENST00000227503 SPANXA1Q9NS26 97 aa10.24□□□□□ -0.77
SF1-201ENST00000227503 C22orf24Q9Y442 160 aa10.24□□□□□ -0.77
SF1-201ENST00000227503 ZNF462Q96JM2 2506 aa10.23□□□□□ -0.77
SF1-201ENST00000227503 IGKV3D-7A0A0C4DH55 119 aa10.23□□□□□ -0.77
SF1-201ENST00000227503 C9orf129Q5T035 196 aaKnown RBP10.23□□□□□ -0.77
SF1-201ENST00000227503 C10orf99Q6UWK7 81 aa10.23□□□□□ -0.77
SF1-201ENST00000227503 Q6ZSN1 163 aa10.23□□□□□ -0.77
SF1-201ENST00000227503 Q9H8V8 135 aa10.23□□□□□ -0.77
SF1-201ENST00000227503 A0A087WVE0 104 aa10.22□□□□□ -0.77
SF1-201ENST00000227503 COX6A2Q02221 97 aa10.22□□□□□ -0.77
SF1-201ENST00000227503 SYNJ2BPP57105 145 aa10.22□□□□□ -0.77
SF1-201ENST00000227503 LINC00308Q8TCZ7 52 aa10.22□□□□□ -0.77
SF1-201ENST00000227503 C2orf48Q96LS8 159 aa10.22□□□□□ -0.77
SF1-201ENST00000227503 LINC00467Q9BRT7 94 aa10.22□□□□□ -0.77
SF1-201ENST00000227503 COX7A2LO14548 114 aa10.21□□□□□ -0.77
SF1-201ENST00000227503 ABCA12Q86UK0 2595 aa10.21□□□□□ -0.77
SF1-201ENST00000227503 USP24Q9UPU5 2620 aa10.21□□□□□ -0.77
SF1-201ENST00000227503 IGHV1OR15-1A0A075B7D0 117 aa10.21□□□□□ -0.78
SF1-201ENST00000227503 B4DSR2 109 aa10.21□□□□□ -0.78
SF1-201ENST00000227503 J3KT08 172 aa10.21□□□□□ -0.78
SF1-201ENST00000227503 COX7CP15954 63 aa10.21□□□□□ -0.78
SF1-201ENST00000227503 IGHV4-59P01825 116 aa10.2□□□□□ -0.78
SF1-201ENST00000227503 C5orf47Q569G3 176 aa10.2□□□□□ -0.78
SF1-201ENST00000227503 IMUPQ9GZP8 106 aa10.2□□□□□ -0.78
SF1-201ENST00000227503 PIK3CD-AS1Q5SR53 167 aa10.2□□□□□ -0.78
SF1-201ENST00000227503 DSCR8Q96T75 97 aa10.2□□□□□ -0.78
SF1-201ENST00000227503 K7EQG2 157 aa10.19□□□□□ -0.78
SF1-201ENST00000227503 DEFB112Q30KQ8 113 aa10.19□□□□□ -0.78
SF1-201ENST00000227503 ACYP1P07311 99 aa10.19□□□□□ -0.78
SF1-201ENST00000227503 RBMY1A1P0DJD3 496 aaKnown RBP10.19□□□□□ -0.78
SF1-201ENST00000227503 RBMY1CP0DJD4 496 aa10.19□□□□□ -0.78
SF1-201ENST00000227503 RBMY1FQ15415 496 aaKnown RBP10.19□□□□□ -0.78
SF1-201ENST00000227503 UBE2D4Q9Y2X8 147 aa10.19□□□□□ -0.78
SF1-201ENST00000227503 TINCRA0A1B0GVN0 87 aa10.18□□□□□ -0.78
SF1-201ENST00000227503 CHCHD7Q9BUK0 85 aa10.18□□□□□ -0.78
SF1-201ENST00000227503 OXTP01178 125 aa10.18□□□□□ -0.78
SF1-201ENST00000227503 BEAN1Q3B7T3 259 aa10.18□□□□□ -0.78
SF1-201ENST00000227503 SNRPD3P62318 126 aaKnown RBP10.17□□□□□ -0.78
SF1-201ENST00000227503 C5orf38Q86SI9 138 aa10.17□□□□□ -0.78
SF1-201ENST00000227503 TMEM89A2RUT3 159 aa10.17□□□□□ -0.78
SF1-201ENST00000227503 PYGO1Q9Y3Y4 419 aa10.17□□□□□ -0.78
SF1-201ENST00000227503 C14orf132Q9NPU4 83 aa10.16□□□□□ -0.78
SF1-201ENST00000227503 PTPN13Q12923 2485 aa10.16□□□□□ -0.78
SF1-201ENST00000227503 A0A1B0GX51 115 aa10.16□□□□□ -0.78
SF1-201ENST00000227503 NDUFA1O15239 70 aa10.15□□□□□ -0.78
SF1-201ENST00000227503 LRRC75A-AS1Q8N1F1 130 aa10.15□□□□□ -0.78
SF1-201ENST00000227503 RNF152Q8N8N0 203 aa10.15□□□□□ -0.78
SF1-201ENST00000227503 PEMTQ9UBM1 199 aa10.15□□□□□ -0.78
SF1-201ENST00000227503 DOPEY1Q5JWR5 2465 aa10.15□□□□□ -0.78
SF1-201ENST00000227503 C4orf26Q17RF5 130 aa10.15□□□□□ -0.79
SF1-201ENST00000227503 TLN2Q9Y4G6 2542 aa10.14□□□□□ -0.79
SF1-201ENST00000227503 CIRBPQ14011 172 aaKnown RBP10.14□□□□□ -0.79
SF1-201ENST00000227503 FBN2P35556 2912 aa10.14□□□□□ -0.79
SF1-201ENST00000227503 WNK1Q9H4A3 2382 aa10.13□□□□□ -0.79
SF1-201ENST00000227503 PRIMA1Q86XR5 153 aa10.13□□□□□ -0.79
SF1-201ENST00000227503 TRACP01848 142 aa10.12□□□□□ -0.79
SF1-201ENST00000227503 ATP5G1P05496 136 aa10.12□□□□□ -0.79
SF1-201ENST00000227503 CRYGAP11844 174 aa10.12□□□□□ -0.79
SF1-201ENST00000227503 DSCR9P59020 149 aa10.12□□□□□ -0.79
SF1-201ENST00000227503 DGAT2L7PQ6IED9 249 aa10.12□□□□□ -0.79
SF1-201ENST00000227503 LINC01356Q8N9X3 169 aa10.12□□□□□ -0.79
SF1-201ENST00000227503 IGHV3OR16-12A0A075B7B8 117 aa10.12□□□□□ -0.79
SF1-201ENST00000227503 A0A096LNT2 108 aa10.12□□□□□ -0.79
SF1-201ENST00000227503 A0A087WYN8 130 aa10.12□□□□□ -0.79
SF1-201ENST00000227503 MALP21145 153 aa10.11□□□□□ -0.79
SF1-201ENST00000227503 LINC00846Q9NV44 126 aa10.11□□□□□ -0.79
SF1-201ENST00000227503 TIMM17BO60830 172 aa10.11□□□□□ -0.79
SF1-201ENST00000227503 HRCT1Q6UXD1 115 aa10.11□□□□□ -0.79
SF1-201ENST00000227503 WFDC9Q8NEX5 89 aa10.11□□□□□ -0.79
SF1-201ENST00000227503 AKAP9Q99996 3911 aa10.11□□□□□ -0.79
SF1-201ENST00000227503 DNAL4O96015 105 aa10.1□□□□□ -0.79
SF1-201ENST00000227503 DPH3Q96FX2 82 aa10.1□□□□□ -0.79
SF1-201ENST00000227503 ATOX1O00244 68 aa10.1□□□□□ -0.79
SF1-201ENST00000227503 SLPIP03973 132 aa10.1□□□□□ -0.79
SF1-201ENST00000227503 PRB1P04280 392 aa10.1□□□□□ -0.79
SF1-201ENST00000227503 HIST1H4AP62805 103 aaKnown RBP10.1□□□□□ -0.79
SF1-201ENST00000227503 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms