RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 SLC25A34Q6PIV7 304 aa11.71□□□□□ -0.53
TVP23C-201ENST00000225576 NFE4Q86UQ8 179 aa11.71□□□□□ -0.53
TVP23C-201ENST00000225576 A0A0J9YWU9 116 aa11.7□□□□□ -0.54
TVP23C-201ENST00000225576 C11orf86A6NJI1 115 aa11.7□□□□□ -0.54
TVP23C-201ENST00000225576 HTN3P15516 51 aa11.7□□□□□ -0.54
TVP23C-201ENST00000225576 Q6ZUT4 128 aa11.7□□□□□ -0.54
TVP23C-201ENST00000225576 MEGF8Q7Z7M0 2845 aa11.7□□□□□ -0.54
TVP23C-201ENST00000225576 DEFA6Q01524 100 aa11.7□□□□□ -0.54
TVP23C-201ENST00000225576 MRPL23Q16540 153 aaKnown RBP11.7□□□□□ -0.54
TVP23C-201ENST00000225576 MGAM2Q2M2H8 2515 aa11.69□□□□□ -0.54
TVP23C-201ENST00000225576 ZNF25P17030 456 aaPredicted RBP11.69□□□□□ -0.54
TVP23C-201ENST00000225576 SH2D6Q7Z4S9 175 aa11.69□□□□□ -0.54
TVP23C-201ENST00000225576 C2orf88Q9BSF0 95 aa11.69□□□□□ -0.54
TVP23C-201ENST00000225576 DLEU1O43261 78 aa11.68□□□□□ -0.54
TVP23C-201ENST00000225576 HNRNPA3P51991 378 aaKnown RBP11.68□□□□□ -0.54
TVP23C-201ENST00000225576 AMMECR1LQ6DCA0 310 aa11.68□□□□□ -0.54
TVP23C-201ENST00000225576 OR5A1Q8NGJ0 315 aa11.68□□□□□ -0.54
TVP23C-201ENST00000225576 PKD1L1Q8TDX9 2849 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 NBEAL2Q6ZNJ1 2754 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 IGKV2D-26A0A0A0MRZ7 120 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 A0A0J9YXV3 536 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 H3BNG1 76 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 NMUP48645 174 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 RNASE13Q5GAN3 156 aaKnown RBP11.67□□□□□ -0.54
TVP23C-201ENST00000225576 BOD1L2Q8IYS8 172 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 MRAPQ8TCY5 172 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 TMEM101Q96IK0 257 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 CDC42SE2Q9NRR3 84 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 ICOSQ9Y6W8 199 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 DNAH3Q8TD57 4116 aa11.67□□□□□ -0.54
TVP23C-201ENST00000225576 TCTAP57738 103 aa11.66□□□□□ -0.54
TVP23C-201ENST00000225576 C11orf45Q8TAV5 145 aa11.66□□□□□ -0.54
TVP23C-201ENST00000225576 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
TVP23C-201ENST00000225576 MRPS16Q9Y3D3 137 aaKnown RBP11.66□□□□□ -0.54
TVP23C-201ENST00000225576 E9PLD3 99 aa11.65□□□□□ -0.54
TVP23C-201ENST00000225576 GAGE6Q13070 117 aa11.65□□□□□ -0.54
TVP23C-201ENST00000225576 Q6ZTC4 211 aa11.65□□□□□ -0.54
TVP23C-201ENST00000225576 A0A096LPF7 62 aa11.65□□□□□ -0.55
TVP23C-201ENST00000225576 TINCRA0A1B0GVN0 87 aa11.65□□□□□ -0.55
TVP23C-201ENST00000225576 UBE2D1P51668 147 aa11.65□□□□□ -0.55
TVP23C-201ENST00000225576 HERVK_113P61574 105 aa11.65□□□□□ -0.55
TVP23C-201ENST00000225576 TMEM170BQ5T4T1 132 aa11.65□□□□□ -0.55
TVP23C-201ENST00000225576 PCP2Q8IVA1 136 aa11.65□□□□□ -0.55
TVP23C-201ENST00000225576 ZNF22P17026 224 aaPredicted RBP11.64□□□□□ -0.55
TVP23C-201ENST00000225576 CTAG1AP78358 180 aa11.64□□□□□ -0.55
TVP23C-201ENST00000225576 FAM19A3Q7Z5A8 133 aa11.64□□□□□ -0.55
TVP23C-201ENST00000225576 TIRAPP58753 221 aa11.63□□□□□ -0.55
TVP23C-201ENST00000225576 NANOS2P60321 138 aaKnown RBP11.63□□□□□ -0.55
TVP23C-201ENST00000225576 TP73-AS1Q9UF72 201 aa11.63□□□□□ -0.55
TVP23C-201ENST00000225576 A0A1B0GUV1 79 aa11.62□□□□□ -0.55
TVP23C-201ENST00000225576 SIVA1O15304 175 aa11.62□□□□□ -0.55
TVP23C-201ENST00000225576 TMEM223A0PJW6 202 aa11.61□□□□□ -0.55
TVP23C-201ENST00000225576 SEC11AP67812 179 aa11.61□□□□□ -0.55
TVP23C-201ENST00000225576 TGP01266 2768 aa11.61□□□□□ -0.55
TVP23C-201ENST00000225576 TRAV8-6A0A0B4J262 113 aa11.6□□□□□ -0.55
TVP23C-201ENST00000225576 C2orf91Q6ZV80 131 aa11.6□□□□□ -0.55
TVP23C-201ENST00000225576 GEMIN7Q9H840 131 aaKnown RBP11.6□□□□□ -0.55
TVP23C-201ENST00000225576 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
TVP23C-201ENST00000225576 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
TVP23C-201ENST00000225576 DEFB131BA0A096LNP1 70 aa11.6□□□□□ -0.55
TVP23C-201ENST00000225576 M0R143 59 aa11.6□□□□□ -0.55
TVP23C-201ENST00000225576 LELP1Q5T871 98 aa11.6□□□□□ -0.55
TVP23C-201ENST00000225576 TTTY13Q9BZ97 58 aa11.6□□□□□ -0.55
TVP23C-201ENST00000225576 NOTCH1P46531 2555 aa11.59□□□□□ -0.55
TVP23C-201ENST00000225576 TMEM262E9PQX1 116 aa11.59□□□□□ -0.55
TVP23C-201ENST00000225576 HERVK_113P63121 156 aa11.59□□□□□ -0.55
TVP23C-201ENST00000225576 LINC00242Q5T6M2 205 aa11.59□□□□□ -0.55
TVP23C-201ENST00000225576 MAPKAPK5-AS1Q8N8E1 139 aa11.59□□□□□ -0.55
TVP23C-201ENST00000225576 B9D2Q9BPU9 175 aa11.59□□□□□ -0.55
TVP23C-201ENST00000225576 TRAV13-1A0A0B4J241 112 aa11.58□□□□□ -0.56
TVP23C-201ENST00000225576 RBX1P62877 108 aa11.58□□□□□ -0.56
TVP23C-201ENST00000225576 SNHG12Q9BXW3 62 aa11.58□□□□□ -0.56
TVP23C-201ENST00000225576 LYPD5Q6UWN5 251 aa11.57□□□□□ -0.56
TVP23C-201ENST00000225576 HIGD1BQ9P298 99 aa11.57□□□□□ -0.56
TVP23C-201ENST00000225576 TRAV10A0A0B4J240 114 aa11.56□□□□□ -0.56
TVP23C-201ENST00000225576 MYMXA0A1B0GTQ4 84 aa11.56□□□□□ -0.56
TVP23C-201ENST00000225576 LEPROTO15243 131 aa11.56□□□□□ -0.56
TVP23C-201ENST00000225576 MPV17L2Q567V2 206 aa11.56□□□□□ -0.56
TVP23C-201ENST00000225576 LINC00469Q8N7U9 141 aa11.56□□□□□ -0.56
TVP23C-201ENST00000225576 H3BRM9 83 aa11.55□□□□□ -0.56
TVP23C-201ENST00000225576 COX6A2Q02221 97 aa11.55□□□□□ -0.56
TVP23C-201ENST00000225576 PLEKHB2Q96CS7 222 aa11.55□□□□□ -0.56
TVP23C-201ENST00000225576 CDKN2A-AS1Q9UH64 79 aa11.55□□□□□ -0.56
TVP23C-201ENST00000225576 J3QQQ9 107 aa11.55□□□□□ -0.56
TVP23C-201ENST00000225576 EREGO14944 169 aa11.55□□□□□ -0.56
TVP23C-201ENST00000225576 LBHQ53QV2 105 aaPredicted RBP11.55□□□□□ -0.56
TVP23C-201ENST00000225576 IGHV1-58A0A0C4DH39 117 aa11.54□□□□□ -0.56
TVP23C-201ENST00000225576 ZNF815PA8K554 130 aa11.53□□□□□ -0.56
TVP23C-201ENST00000225576 LGALS3P17931 250 aaKnown RBP11.53□□□□□ -0.56
TVP23C-201ENST00000225576 TSPEAR-AS2P59090 65 aa11.53□□□□□ -0.56
TVP23C-201ENST00000225576 IGHV3-30-3P0DP02 117 aa11.52□□□□□ -0.57
TVP23C-201ENST00000225576 LINC00959A0A1B0GUT2 108 aa11.51□□□□□ -0.57
TVP23C-201ENST00000225576 CCL25O15444 150 aa11.51□□□□□ -0.57
TVP23C-201ENST00000225576 SPINK8P0C7L1 97 aa11.51□□□□□ -0.57
TVP23C-201ENST00000225576 HINT1P49773 126 aaPredicted RBP11.51□□□□□ -0.57
TVP23C-201ENST00000225576 IGHV3-64A0A075B6Q5 118 aa11.5□□□□□ -0.57
TVP23C-201ENST00000225576 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
TVP23C-201ENST00000225576 HSD52Q0P140 79 aa11.5□□□□□ -0.57
TVP23C-201ENST00000225576 C15orf53Q8NAA6 179 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms