RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ICOSQ9Y6W8 199 aa12.49□□□□□ -0.41
USB1-201ENST00000219281 DYNLRB2Q8TF09 96 aa12.49□□□□□ -0.41
USB1-201ENST00000219281 CUBNO60494 3623 aa12.49□□□□□ -0.41
USB1-201ENST00000219281 DNAJC30Q96LL9 226 aa12.48□□□□□ -0.41
USB1-201ENST00000219281 ZFAND6Q6FIF0 208 aa12.48□□□□□ -0.41
USB1-201ENST00000219281 Q8N2B8 174 aa12.48□□□□□ -0.41
USB1-201ENST00000219281 CDKN2A-AS1Q9UH64 79 aa12.48□□□□□ -0.41
USB1-201ENST00000219281 PDZD2O15018 2839 aa12.47□□□□□ -0.41
USB1-201ENST00000219281 TRBV10-2A0A0K0K1G8 114 aa12.46□□□□□ -0.41
USB1-201ENST00000219281 RS1O15537 224 aa12.46□□□□□ -0.41
USB1-201ENST00000219281 INSP01308 110 aa12.46□□□□□ -0.41
USB1-201ENST00000219281 BEAN1Q3B7T3 259 aa12.46□□□□□ -0.41
USB1-201ENST00000219281 DAND5Q8N907 189 aa12.46□□□□□ -0.41
USB1-201ENST00000219281 KMT2BQ9UMN6 2715 aaPredicted RBP12.46□□□□□ -0.42
USB1-201ENST00000219281 TEX49A0A1B0GTD5 131 aa12.45□□□□□ -0.42
USB1-201ENST00000219281 C4orf3Q8WVX3 66 aa12.45□□□□□ -0.42
USB1-201ENST00000219281 FLNAP21333 2647 aaKnown RBP12.45□□□□□ -0.42
USB1-201ENST00000219281 HELZ2Q9BYK8 2649 aaKnown RBP12.45□□□□□ -0.42
USB1-201ENST00000219281 DEFB114Q30KQ6 69 aa12.45□□□□□ -0.42
USB1-201ENST00000219281 DGAT2L7PQ6IED9 249 aa12.45□□□□□ -0.42
USB1-201ENST00000219281 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.45□□□□□ -0.42
USB1-201ENST00000219281 YAE1D1Q9NRH1 226 aa12.45□□□□□ -0.42
USB1-201ENST00000219281 TMEM101Q96IK0 257 aa12.44□□□□□ -0.42
USB1-201ENST00000219281 XCL2Q9UBD3 114 aa12.44□□□□□ -0.42
USB1-201ENST00000219281 ITPR2Q14571 2701 aa12.44□□□□□ -0.42
USB1-201ENST00000219281 PLA2G2AP14555 144 aa12.44□□□□□ -0.42
USB1-201ENST00000219281 COX6A2Q02221 97 aa12.44□□□□□ -0.42
USB1-201ENST00000219281 ANK3Q12955 4377 aaKnown RBP12.43□□□□□ -0.42
USB1-201ENST00000219281 NF1P21359 2839 aa12.43□□□□□ -0.42
USB1-201ENST00000219281 IGHV3OR16-12A0A075B7B8 117 aa12.43□□□□□ -0.42
USB1-201ENST00000219281 COX6CP09669 75 aa12.43□□□□□ -0.42
USB1-201ENST00000219281 TIRAPP58753 221 aa12.43□□□□□ -0.42
USB1-201ENST00000219281 CLEC2BQ92478 149 aa12.43□□□□□ -0.42
USB1-201ENST00000219281 LINC01600Q96MT4 127 aa12.43□□□□□ -0.42
USB1-201ENST00000219281 C2orf82Q6UX34 121 aa12.42□□□□□ -0.42
USB1-201ENST00000219281 IGLV5-45A0A087WSX0 123 aa12.42□□□□□ -0.42
USB1-201ENST00000219281 H7C423 109 aa12.42□□□□□ -0.42
USB1-201ENST00000219281 NDUFA1O15239 70 aa12.42□□□□□ -0.42
USB1-201ENST00000219281 TIMM17BO60830 172 aa12.42□□□□□ -0.42
USB1-201ENST00000219281 RPL13AP40429 203 aaKnown RBP12.42□□□□□ -0.42
USB1-201ENST00000219281 ACANP16112 2415 aa12.41□□□□□ -0.42
USB1-201ENST00000219281 TRAV26-1A0A087WT03 109 aa12.41□□□□□ -0.42
USB1-201ENST00000219281 IFITM1P13164 125 aa12.41□□□□□ -0.42
USB1-201ENST00000219281 UBE2WQ96B02 151 aa12.41□□□□□ -0.42
USB1-201ENST00000219281 RNF183Q96D59 192 aa12.41□□□□□ -0.42
USB1-201ENST00000219281 TEX29Q8N6K0 151 aa12.4□□□□□ -0.42
USB1-201ENST00000219281 CITED1Q99966 193 aa12.4□□□□□ -0.42
USB1-201ENST00000219281 TRGV1A0A0A0MS02 117 aa12.4□□□□□ -0.42
USB1-201ENST00000219281 TRAV8-4A0A0B4J246 113 aa12.4□□□□□ -0.42
USB1-201ENST00000219281 J3QKU1 62 aa12.4□□□□□ -0.42
USB1-201ENST00000219281 LINC00694P0DN24 101 aa12.39□□□□□ -0.43
USB1-201ENST00000219281 ZNF625Q96I27 306 aaPredicted RBP12.39□□□□□ -0.43
USB1-201ENST00000219281 A0A0U1RRA0 63 aa12.39□□□□□ -0.43
USB1-201ENST00000219281 NDUFA7O95182 113 aa12.39□□□□□ -0.43
USB1-201ENST00000219281 KRTAP1-1Q07627 177 aa12.39□□□□□ -0.43
USB1-201ENST00000219281 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
USB1-201ENST00000219281 LINC00242Q5T6M2 205 aa12.39□□□□□ -0.43
USB1-201ENST00000219281 C1orf158Q8N1D5 194 aa12.39□□□□□ -0.43
USB1-201ENST00000219281 Q9H8V8 135 aa12.39□□□□□ -0.43
USB1-201ENST00000219281 LST1O00453 97 aa12.38□□□□□ -0.43
USB1-201ENST00000219281 CIRBPQ14011 172 aaKnown RBP12.38□□□□□ -0.43
USB1-201ENST00000219281 STHQ8IWL8 128 aa12.38□□□□□ -0.43
USB1-201ENST00000219281 CRLF1O75462 422 aa12.37□□□□□ -0.43
USB1-201ENST00000219281 SNCGO76070 127 aa12.37□□□□□ -0.43
USB1-201ENST00000219281 HERVK_113P63121 156 aa12.37□□□□□ -0.43
USB1-201ENST00000219281 TMEM86BQ8N661 226 aa12.37□□□□□ -0.43
USB1-201ENST00000219281 CITED2Q99967 270 aaPredicted RBP12.37□□□□□ -0.43
USB1-201ENST00000219281 ESM1Q9NQ30 184 aa12.37□□□□□ -0.43
USB1-201ENST00000219281 TRAV4A0A0B4J268 109 aa12.36□□□□□ -0.43
USB1-201ENST00000219281 IGLV5-39A0A0G2JS06 123 aa12.36□□□□□ -0.43
USB1-201ENST00000219281 H3BT86 120 aa12.36□□□□□ -0.43
USB1-201ENST00000219281 LINC00308Q8TCZ7 52 aa12.36□□□□□ -0.43
USB1-201ENST00000219281 TRAV13-1A0A0B4J241 112 aa12.36□□□□□ -0.43
USB1-201ENST00000219281 DNAJC9-AS1A6NH13 148 aa12.36□□□□□ -0.43
USB1-201ENST00000219281 ANAPC13Q9BS18 74 aa12.36□□□□□ -0.43
USB1-201ENST00000219281 NTM-AS1Q6ZSK4 140 aa12.35□□□□□ -0.43
USB1-201ENST00000219281 C11orf44Q8N8P7 122 aa12.35□□□□□ -0.43
USB1-201ENST00000219281 RPL36AP83881 106 aaKnown RBP12.35□□□□□ -0.43
USB1-201ENST00000219281 Q6ZTI0 123 aa12.35□□□□□ -0.43
USB1-201ENST00000219281 IL17DQ8TAD2 202 aa12.35□□□□□ -0.43
USB1-201ENST00000219281 RPL36ALQ969Q0 106 aaKnown RBP12.35□□□□□ -0.43
USB1-201ENST00000219281 UNC79Q9P2D8 2635 aa12.34□□□□□ -0.43
USB1-201ENST00000219281 A0A1W2PRX2 142 aa12.34□□□□□ -0.43
USB1-201ENST00000219281 GAGE2BQ13066 116 aa12.34□□□□□ -0.43
USB1-201ENST00000219281 GAGE2EQ4V326 116 aa12.34□□□□□ -0.43
USB1-201ENST00000219281 CLUHP3Q96NS8 147 aa12.34□□□□□ -0.43
USB1-201ENST00000219281 GAGE2DQ9UEU5 116 aa12.34□□□□□ -0.43
USB1-201ENST00000219281 SMIM1B2RUZ4 78 aa12.34□□□□□ -0.43
USB1-201ENST00000219281 K7EQD1 137 aa12.34□□□□□ -0.43
USB1-201ENST00000219281 GAGE12JA6NER3 117 aa12.32□□□□□ -0.44
USB1-201ENST00000219281 GAGE4Q13068 117 aa12.32□□□□□ -0.44
USB1-201ENST00000219281 GAGE5Q13069 117 aa12.32□□□□□ -0.44
USB1-201ENST00000219281 SOSTDC1Q6X4U4 206 aa12.32□□□□□ -0.44
USB1-201ENST00000219281 FAM19A3Q7Z5A8 133 aa12.32□□□□□ -0.44
USB1-201ENST00000219281 C15orf53Q8NAA6 179 aa12.32□□□□□ -0.44
USB1-201ENST00000219281 MTORP42345 2549 aa12.31□□□□□ -0.44
USB1-201ENST00000219281 TRBV10-1A0A0K0K1A3 114 aa12.31□□□□□ -0.44
USB1-201ENST00000219281 DAZ2Q13117 558 aaKnown RBP12.31□□□□□ -0.44
USB1-201ENST00000219281 MEIG1Q5JSS6 88 aa12.31□□□□□ -0.44
USB1-201ENST00000219281 DAZ4Q86SG3 579 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms