RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 HBDP02042 147 aa18.38■□□□□ 0.53
CHMP4B-201ENST00000217402 OPRPNQ99935 248 aaPredicted RBP18.38■□□□□ 0.53
CHMP4B-201ENST00000217402 SACSQ9NZJ4 4579 aa18.38■□□□□ 0.53
CHMP4B-201ENST00000217402 K7EP13 123 aa18.38■□□□□ 0.53
CHMP4B-201ENST00000217402 NDUFA6P56556 154 aa18.38■□□□□ 0.53
CHMP4B-201ENST00000217402 RNASE13Q5GAN3 156 aaKnown RBP18.38■□□□□ 0.53
CHMP4B-201ENST00000217402 Q6ZUT4 128 aa18.38■□□□□ 0.53
CHMP4B-201ENST00000217402 FAM19A2Q8N3H0 131 aa18.38■□□□□ 0.53
CHMP4B-201ENST00000217402 UBE2WQ96B02 151 aa18.38■□□□□ 0.53
CHMP4B-201ENST00000217402 Q6ZR54 194 aa18.37■□□□□ 0.53
CHMP4B-201ENST00000217402 CSDC2Q9Y534 153 aaKnown RBP18.37■□□□□ 0.53
CHMP4B-201ENST00000217402 IBA57-AS1B1ANH7 110 aa18.36■□□□□ 0.53
CHMP4B-201ENST00000217402 Q9HAA7 133 aa18.36■□□□□ 0.53
CHMP4B-201ENST00000217402 CDC42SE2Q9NRR3 84 aa18.36■□□□□ 0.53
CHMP4B-201ENST00000217402 IGKV3OR2-268A0A0C4DH90 116 aa18.35■□□□□ 0.53
CHMP4B-201ENST00000217402 CRPP02741 224 aa18.35■□□□□ 0.53
CHMP4B-201ENST00000217402 ZNF664Q8N3J9 261 aa18.35■□□□□ 0.53
CHMP4B-201ENST00000217402 SCGB3A1Q96QR1 104 aa18.35■□□□□ 0.53
CHMP4B-201ENST00000217402 PYGO1Q9Y3Y4 419 aa18.35■□□□□ 0.53
CHMP4B-201ENST00000217402 IGIPA6NJ69 53 aa18.34■□□□□ 0.53
CHMP4B-201ENST00000217402 REG3AQ06141 175 aa18.34■□□□□ 0.53
CHMP4B-201ENST00000217402 FAM104AQ969W3 186 aa18.34■□□□□ 0.53
CHMP4B-201ENST00000217402 HYDINQ4G0P3 5121 aa18.33■□□□□ 0.53
CHMP4B-201ENST00000217402 DNAH6Q9C0G6 4158 aa18.33■□□□□ 0.52
CHMP4B-201ENST00000217402 IGLV4-3A0A075B6K6 122 aa18.33■□□□□ 0.52
CHMP4B-201ENST00000217402 ENHOQ6UWT2 76 aa18.33■□□□□ 0.52
CHMP4B-201ENST00000217402 ERASQ7Z444 233 aa18.32■□□□□ 0.52
CHMP4B-201ENST00000217402 PRR34Q9NV39 138 aa18.32■□□□□ 0.52
CHMP4B-201ENST00000217402 LINC01549A6NIU2 74 aa18.31■□□□□ 0.52
CHMP4B-201ENST00000217402 TIMM17AQ99595 171 aa18.31■□□□□ 0.52
CHMP4B-201ENST00000217402 MRPS36P82909 103 aaKnown RBP18.31■□□□□ 0.52
CHMP4B-201ENST00000217402 COA6Q5JTJ3 125 aaKnown RBP18.31■□□□□ 0.52
CHMP4B-201ENST00000217402 PDZD11Q5EBL8 140 aa18.3■□□□□ 0.52
CHMP4B-201ENST00000217402 TMEM141Q96I45 108 aa18.3■□□□□ 0.52
CHMP4B-201ENST00000217402 TRAV8-3A0A0A6YYJ7 113 aa18.28■□□□□ 0.52
CHMP4B-201ENST00000217402 Q6ZN92 141 aa18.28■□□□□ 0.52
CHMP4B-201ENST00000217402 ZC2HC1BQ5TFG8 222 aa18.27■□□□□ 0.52
CHMP4B-201ENST00000217402 IGLV10-54A0A075B6I4 117 aa18.27■□□□□ 0.51
CHMP4B-201ENST00000217402 RYR2Q92736 4967 aa18.26■□□□□ 0.51
CHMP4B-201ENST00000217402 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.26■□□□□ 0.51
CHMP4B-201ENST00000217402 MIAQ16674 131 aa18.26■□□□□ 0.51
CHMP4B-201ENST00000217402 C6orf223Q8N319 242 aa18.26■□□□□ 0.51
CHMP4B-201ENST00000217402 NPSP0C0P6 89 aa18.25■□□□□ 0.51
CHMP4B-201ENST00000217402 TEX43Q6ZNM6 134 aa18.25■□□□□ 0.51
CHMP4B-201ENST00000217402 VCX2Q9H322 139 aa18.25■□□□□ 0.51
CHMP4B-201ENST00000217402 IGKV2D-24A0A075B6R9 120 aa18.24■□□□□ 0.51
CHMP4B-201ENST00000217402 TRAV13-1A0A0B4J241 112 aa18.24■□□□□ 0.51
CHMP4B-201ENST00000217402 IFITM10A6NMD0 228 aa18.24■□□□□ 0.51
CHMP4B-201ENST00000217402 S100A6P06703 90 aa18.24■□□□□ 0.51
CHMP4B-201ENST00000217402 C1orf134Q5TEV5 83 aa18.24■□□□□ 0.51
CHMP4B-201ENST00000217402 ATP5LO75964 103 aa18.23■□□□□ 0.51
CHMP4B-201ENST00000217402 FABP4P15090 132 aa18.23■□□□□ 0.51
CHMP4B-201ENST00000217402 PAPPA-AS1Q5QFB9 102 aa18.23■□□□□ 0.51
CHMP4B-201ENST00000217402 LINC00173Q6ZV60 143 aa18.23■□□□□ 0.51
CHMP4B-201ENST00000217402 LINC00959A0A1B0GUT2 108 aa18.23■□□□□ 0.51
CHMP4B-201ENST00000217402 LEPROTL1O95214 131 aa18.23■□□□□ 0.51
CHMP4B-201ENST00000217402 BAALCQ8WXS3 180 aa18.23■□□□□ 0.51
CHMP4B-201ENST00000217402 C1orf43Q9BWL3 253 aa18.23■□□□□ 0.51
CHMP4B-201ENST00000217402 AMELXQ99217 191 aa18.22■□□□□ 0.51
CHMP4B-201ENST00000217402 NFE4Q86UQ8 179 aa18.21■□□□□ 0.51
CHMP4B-201ENST00000217402 C2orf88Q9BSF0 95 aa18.21■□□□□ 0.51
CHMP4B-201ENST00000217402 RMI2Q96E14 147 aa18.2■□□□□ 0.5
CHMP4B-201ENST00000217402 TRAV8-4A0A0B4J246 113 aa18.2■□□□□ 0.5
CHMP4B-201ENST00000217402 IFI27L1Q96BM0 104 aa18.2■□□□□ 0.5
CHMP4B-201ENST00000217402 TMA7Q9Y2S6 64 aaKnown RBP18.2■□□□□ 0.5
CHMP4B-201ENST00000217402 SS18Q15532 418 aa18.19■□□□□ 0.5
CHMP4B-201ENST00000217402 CHCHD10Q8WYQ3 142 aaPredicted RBP18.19■□□□□ 0.5
CHMP4B-201ENST00000217402 CCL25O15444 150 aa18.17■□□□□ 0.5
CHMP4B-201ENST00000217402 XCL1P47992 114 aa18.17■□□□□ 0.5
CHMP4B-201ENST00000217402 Q6ZRN7 208 aaPredicted RBP18.17■□□□□ 0.5
CHMP4B-201ENST00000217402 HSPB8Q9UJY1 196 aa18.17■□□□□ 0.5
CHMP4B-201ENST00000217402 PMVKQ15126 192 aa18.16■□□□□ 0.5
CHMP4B-201ENST00000217402 TM2D2Q9BX73 214 aa18.16■□□□□ 0.5
CHMP4B-201ENST00000217402 CST9LQ9H4G1 147 aa18.16■□□□□ 0.5
CHMP4B-201ENST00000217402 PSCAO43653 123 aa18.16■□□□□ 0.5
CHMP4B-201ENST00000217402 PRSS1P07477 247 aa18.16■□□□□ 0.5
CHMP4B-201ENST00000217402 PRSS29PA6NIE9 313 aa18.15■□□□□ 0.5
CHMP4B-201ENST00000217402 UBE2D1P51668 147 aa18.15■□□□□ 0.5
CHMP4B-201ENST00000217402 SNRPEP62304 92 aaKnown RBP18.15■□□□□ 0.5
CHMP4B-201ENST00000217402 GAGE12HA6NDE8 117 aa18.14■□□□□ 0.49
CHMP4B-201ENST00000217402 H0Y8G0 127 aa18.14■□□□□ 0.49
CHMP4B-201ENST00000217402 HIST3H2BBQ8N257 126 aa18.14■□□□□ 0.49
CHMP4B-201ENST00000217402 KRTAP26-1Q6PEX3 210 aa18.13■□□□□ 0.49
CHMP4B-201ENST00000217402 COX11Q9Y6N1 276 aa18.13■□□□□ 0.49
CHMP4B-201ENST00000217402 DNAH2Q9P225 4427 aa18.13■□□□□ 0.49
CHMP4B-201ENST00000217402 RTL8CO15255 209 aa18.12■□□□□ 0.49
CHMP4B-201ENST00000217402 S100A2P29034 98 aa18.11■□□□□ 0.49
CHMP4B-201ENST00000217402 MAPKAPK5-AS1Q8N8E1 139 aa18.11■□□□□ 0.49
CHMP4B-201ENST00000217402 DNAH10Q8IVF4 4471 aa18.1■□□□□ 0.49
CHMP4B-201ENST00000217402 LINC00242Q5T6M2 205 aa18.1■□□□□ 0.49
CHMP4B-201ENST00000217402 RYR3Q15413 4870 aa18.1■□□□□ 0.49
CHMP4B-201ENST00000217402 A0A0J9YXV3 536 aa18.09■□□□□ 0.49
CHMP4B-201ENST00000217402 C5orf52A6NGY3 159 aa18.09■□□□□ 0.49
CHMP4B-201ENST00000217402 FOXI1Q12951 378 aa18.09■□□□□ 0.49
CHMP4B-201ENST00000217402 CD164L2Q6UWJ8 174 aa18.09■□□□□ 0.49
CHMP4B-201ENST00000217402 PACRGQ96M98 296 aaPredicted RBP18.08■□□□□ 0.48
CHMP4B-201ENST00000217402 MAP1LC3CQ9BXW4 147 aa18.08■□□□□ 0.48
CHMP4B-201ENST00000217402 COX6A2Q02221 97 aa18.07■□□□□ 0.48
CHMP4B-201ENST00000217402 HIST1H2BLQ99880 126 aa18.06■□□□□ 0.48
CHMP4B-201ENST00000217402 TRAV12-1A0A0B4J245 112 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms