RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 DEFB131BA0A096LNP1 70 aa10.11□□□□□ -0.79
TGFBR3-201ENST00000212355 M0QY20 66 aa10.1□□□□□ -0.79
TGFBR3-201ENST00000212355 LINC00308Q8TCZ7 52 aa10.1□□□□□ -0.79
TGFBR3-201ENST00000212355 IGLV2-11P01706 119 aa10.1□□□□□ -0.79
TGFBR3-201ENST00000212355 Q6ZSV7 163 aa10.1□□□□□ -0.79
TGFBR3-201ENST00000212355 SMR3AQ99954 134 aa10.1□□□□□ -0.79
TGFBR3-201ENST00000212355 K7EQG2 157 aa10.1□□□□□ -0.79
TGFBR3-201ENST00000212355 INSL3P51460 131 aa10.1□□□□□ -0.79
TGFBR3-201ENST00000212355 B9D2Q9BPU9 175 aa10.1□□□□□ -0.79
TGFBR3-201ENST00000212355 H3BT86 120 aa10.1□□□□□ -0.79
TGFBR3-201ENST00000212355 IGF2-ASQ6U949 168 aa10.09□□□□□ -0.79
TGFBR3-201ENST00000212355 LTBP2Q14767 1821 aa10.09□□□□□ -0.79
TGFBR3-201ENST00000212355 TNFRSF13BO14836 293 aaPredicted RBP10.09□□□□□ -0.79
TGFBR3-201ENST00000212355 SPINK6Q6UWN8 80 aa10.09□□□□□ -0.79
TGFBR3-201ENST00000212355 OTOGLQ3ZCN5 2332 aa10.09□□□□□ -0.79
TGFBR3-201ENST00000212355 CRIP2P52943 208 aaPredicted RBP10.08□□□□□ -0.8
TGFBR3-201ENST00000212355 CXCL5P42830 114 aa10.08□□□□□ -0.8
TGFBR3-201ENST00000212355 C6orf99Q4VX62 202 aa10.08□□□□□ -0.8
TGFBR3-201ENST00000212355 CLUHP3Q96NS8 147 aa10.08□□□□□ -0.8
TGFBR3-201ENST00000212355 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
TGFBR3-201ENST00000212355 YPEL4Q96NS1 127 aa10.07□□□□□ -0.8
TGFBR3-201ENST00000212355 CUL9Q8IWT3 2517 aa10.07□□□□□ -0.8
TGFBR3-201ENST00000212355 LY6LH3BQJ8 138 aa10.07□□□□□ -0.8
TGFBR3-201ENST00000212355 PRORYQ9H606 182 aa10.06□□□□□ -0.8
TGFBR3-201ENST00000212355 KLK5Q9Y337 293 aaPredicted RBP10.06□□□□□ -0.8
TGFBR3-201ENST00000212355 TRBV6-8A0A0A6YYG3 113 aa10.06□□□□□ -0.8
TGFBR3-201ENST00000212355 SPANXDQ9BXN6 97 aa10.06□□□□□ -0.8
TGFBR3-201ENST00000212355 RNASE3P12724 160 aaKnown RBP10.06□□□□□ -0.8
TGFBR3-201ENST00000212355 ATG2AQ2TAZ0 1938 aa10.05□□□□□ -0.8
TGFBR3-201ENST00000212355 NDUFC2O95298 119 aa10.05□□□□□ -0.8
TGFBR3-201ENST00000212355 TSHBP01222 138 aa10.05□□□□□ -0.8
TGFBR3-201ENST00000212355 C2orf91Q6ZV80 131 aa10.05□□□□□ -0.8
TGFBR3-201ENST00000212355 LINC00643Q86TS7 51 aa10.05□□□□□ -0.8
TGFBR3-201ENST00000212355 WFDC13Q8IUB5 93 aa10.05□□□□□ -0.8
TGFBR3-201ENST00000212355 PKIGQ9Y2B9 76 aa10.05□□□□□ -0.8
TGFBR3-201ENST00000212355 RAI1Q7Z5J4 1906 aaPredicted RBP10.05□□□□□ -0.8
TGFBR3-201ENST00000212355 TRBV6-5A0A0K0K1A5 114 aa10.04□□□□□ -0.8
TGFBR3-201ENST00000212355 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
TGFBR3-201ENST00000212355 NRACQ8N912 160 aa10.04□□□□□ -0.8
TGFBR3-201ENST00000212355 EML5Q05BV3 1969 aa10.04□□□□□ -0.8
TGFBR3-201ENST00000212355 UFSP1Q6NVU6 142 aa10.04□□□□□ -0.8
TGFBR3-201ENST00000212355 CCDC179H3BU77 68 aa10.03□□□□□ -0.8
TGFBR3-201ENST00000212355 UTRNP46939 3433 aa10.03□□□□□ -0.8
TGFBR3-201ENST00000212355 EXPH5Q8NEV8 1989 aa10.03□□□□□ -0.8
TGFBR3-201ENST00000212355 IGLV9-49A0A0B4J1Y8 123 aa10.03□□□□□ -0.8
TGFBR3-201ENST00000212355 LY6G6DO95868 133 aa10.03□□□□□ -0.8
TGFBR3-201ENST00000212355 C9orf116Q5BN46 136 aaPredicted RBP10.03□□□□□ -0.8
TGFBR3-201ENST00000212355 PTPN13Q12923 2485 aa10.03□□□□□ -0.8
TGFBR3-201ENST00000212355 CCKP06307 115 aa10.02□□□□□ -0.8
TGFBR3-201ENST00000212355 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.8
TGFBR3-201ENST00000212355 RETNQ9HD89 108 aa10.02□□□□□ -0.8
TGFBR3-201ENST00000212355 ZNF702PQ9H963 129 aa10.02□□□□□ -0.81
TGFBR3-201ENST00000212355 SPG11Q96JI7 2443 aa10.02□□□□□ -0.81
TGFBR3-201ENST00000212355 U3KQK5 164 aa10.01□□□□□ -0.81
TGFBR3-201ENST00000212355 SMIM11BQ8TCY0 68 aa10.01□□□□□ -0.81
TGFBR3-201ENST00000212355 CASC2Q6XLA1 102 aa10.01□□□□□ -0.81
TGFBR3-201ENST00000212355 SORL1Q92673 2214 aa10.01□□□□□ -0.81
TGFBR3-201ENST00000212355 LINC00574Q9H8X3 128 aa10.01□□□□□ -0.81
TGFBR3-201ENST00000212355 TMEM89A2RUT3 159 aa10□□□□□ -0.81
TGFBR3-201ENST00000212355 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
TGFBR3-201ENST00000212355 FBXL19-AS1Q494R0 122 aa10□□□□□ -0.81
TGFBR3-201ENST00000212355 C3orf22Q8N5N4 141 aa10□□□□□ -0.81
TGFBR3-201ENST00000212355 WDR87Q6ZQQ6 2873 aa10□□□□□ -0.81
TGFBR3-201ENST00000212355 C11orf71Q6IPW1 123 aa10□□□□□ -0.81
TGFBR3-201ENST00000212355 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10□□□□□ -0.81
TGFBR3-201ENST00000212355 ZNF843Q8N446 348 aa10□□□□□ -0.81
TGFBR3-201ENST00000212355 RETNLBQ9BQ08 111 aa10□□□□□ -0.81
TGFBR3-201ENST00000212355 NOTCH2Q04721 2471 aa9.99□□□□□ -0.81
TGFBR3-201ENST00000212355 SEC61GP60059 68 aa9.99□□□□□ -0.81
TGFBR3-201ENST00000212355 ZNF580Q9UK33 172 aa9.99□□□□□ -0.81
TGFBR3-201ENST00000212355 FAM236DA0A1B0GTK5 79 aa9.99□□□□□ -0.81
TGFBR3-201ENST00000212355 FAM236CP0DP71 79 aa9.99□□□□□ -0.81
TGFBR3-201ENST00000212355 RBX1P62877 108 aa9.99□□□□□ -0.81
TGFBR3-201ENST00000212355 UBE2D4Q9Y2X8 147 aa9.99□□□□□ -0.81
TGFBR3-201ENST00000212355 PTPRSQ13332 1948 aa9.99□□□□□ -0.81
TGFBR3-201ENST00000212355 Q6ZQY7 126 aa9.98□□□□□ -0.81
TGFBR3-201ENST00000212355 PLA2G2AP14555 144 aa9.98□□□□□ -0.81
TGFBR3-201ENST00000212355 OXLD1Q5BKU9 147 aa9.98□□□□□ -0.81
TGFBR3-201ENST00000212355 CSPG4Q6UVK1 2322 aa9.98□□□□□ -0.81
TGFBR3-201ENST00000212355 USP17L23D6RBM5 183 aa9.98□□□□□ -0.81
TGFBR3-201ENST00000212355 AVPP01185 164 aa9.98□□□□□ -0.81
TGFBR3-201ENST00000212355 COX6A2Q02221 97 aa9.98□□□□□ -0.81
TGFBR3-201ENST00000212355 CELA1Q9UNI1 258 aa9.97□□□□□ -0.81
TGFBR3-201ENST00000212355 LYRM9A8MSI8 78 aa9.96□□□□□ -0.82
TGFBR3-201ENST00000212355 HILS1P60008 231 aa9.96□□□□□ -0.82
TGFBR3-201ENST00000212355 H7C423 109 aa9.96□□□□□ -0.82
TGFBR3-201ENST00000212355 KPRPQ5T749 579 aaPredicted RBP9.96□□□□□ -0.82
TGFBR3-201ENST00000212355 LINC00959A0A1B0GUT2 108 aa9.95□□□□□ -0.82
TGFBR3-201ENST00000212355 C9orf85Q96MD7 179 aa9.95□□□□□ -0.82
TGFBR3-201ENST00000212355 XGP55808 180 aa9.95□□□□□ -0.82
TGFBR3-201ENST00000212355 CENPFP49454 3210 aa9.95□□□□□ -0.82
TGFBR3-201ENST00000212355 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
TGFBR3-201ENST00000212355 ODF3Q96PU9 254 aa9.95□□□□□ -0.82
TGFBR3-201ENST00000212355 IBA57-AS1B1ANH7 110 aa9.94□□□□□ -0.82
TGFBR3-201ENST00000212355 SYCNQ0VAF6 134 aa9.94□□□□□ -0.82
TGFBR3-201ENST00000212355 LINC01006Q8NI28 216 aa9.94□□□□□ -0.82
TGFBR3-201ENST00000212355 KRTAP10-9P60411 292 aa9.94□□□□□ -0.82
TGFBR3-201ENST00000212355 H3BQ85 93 aa9.93□□□□□ -0.82
TGFBR3-201ENST00000212355 UBE2D1P51668 147 aa9.93□□□□□ -0.82
TGFBR3-201ENST00000212355 LY6G6CO95867 125 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms