RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 LURAP1LQ8IV03 231 aa13.08□□□□□ -0.32
CTSA-201ENST00000191018 CMYA5Q8N3K9 4069 aa13.07□□□□□ -0.32
CTSA-201ENST00000191018 MYMXA0A1B0GTQ4 84 aa13.07□□□□□ -0.32
CTSA-201ENST00000191018 TMEM223A0PJW6 202 aa13.06□□□□□ -0.32
CTSA-201ENST00000191018 DEFB4AO15263 64 aa13.06□□□□□ -0.32
CTSA-201ENST00000191018 PRO0255Q9UI72 69 aa13.05□□□□□ -0.32
CTSA-201ENST00000191018 TINCRA0A1B0GVN0 87 aa13.04□□□□□ -0.32
CTSA-201ENST00000191018 SEC11AP67812 179 aa13.04□□□□□ -0.32
CTSA-201ENST00000191018 DGAT2L7PQ6IED9 249 aa13.04□□□□□ -0.32
CTSA-201ENST00000191018 TMEM243Q9BU79 118 aa13.04□□□□□ -0.32
CTSA-201ENST00000191018 H7C423 109 aa13.04□□□□□ -0.32
CTSA-201ENST00000191018 UBE2D1P51668 147 aa13.04□□□□□ -0.32
CTSA-201ENST00000191018 ORAOV1Q8WV07 137 aa13.04□□□□□ -0.32
CTSA-201ENST00000191018 TSPEAR-AS2P59090 65 aa13.03□□□□□ -0.32
CTSA-201ENST00000191018 SMAGPQ0VAQ4 97 aa13.03□□□□□ -0.32
CTSA-201ENST00000191018 CELA1Q9UNI1 258 aa13.03□□□□□ -0.32
CTSA-201ENST00000191018 PKD1L1Q8TDX9 2849 aa13.02□□□□□ -0.32
CTSA-201ENST00000191018 TRBV6-8A0A0A6YYG3 113 aa13.02□□□□□ -0.32
CTSA-201ENST00000191018 ZNF815PA8K554 130 aa13.02□□□□□ -0.32
CTSA-201ENST00000191018 ZNF25P17030 456 aaPredicted RBP13.02□□□□□ -0.32
CTSA-201ENST00000191018 MAST4O15021 2626 aa13.02□□□□□ -0.33
CTSA-201ENST00000191018 GYPEP15421 78 aa13.02□□□□□ -0.33
CTSA-201ENST00000191018 LEPROTO15243 131 aa13.01□□□□□ -0.33
CTSA-201ENST00000191018 DAD1P61803 113 aa13.01□□□□□ -0.33
CTSA-201ENST00000191018 CDC42SE2Q9NRR3 84 aa13.01□□□□□ -0.33
CTSA-201ENST00000191018 J3QQQ9 107 aa13□□□□□ -0.33
CTSA-201ENST00000191018 TAL2Q16559 108 aa13□□□□□ -0.33
CTSA-201ENST00000191018 FAM19A3Q7Z5A8 133 aa13□□□□□ -0.33
CTSA-201ENST00000191018 G3V4G9 280 aa12.99□□□□□ -0.33
CTSA-201ENST00000191018 UBE2L6O14933 153 aa12.99□□□□□ -0.33
CTSA-201ENST00000191018 SPART-AS1P0CW21 52 aa12.99□□□□□ -0.33
CTSA-201ENST00000191018 TIRAPP58753 221 aa12.99□□□□□ -0.33
CTSA-201ENST00000191018 OR5A1Q8NGJ0 315 aa12.99□□□□□ -0.33
CTSA-201ENST00000191018 TAX1BP3O14907 124 aa12.99□□□□□ -0.33
CTSA-201ENST00000191018 ATP6V0E2Q8NHE4 81 aa12.99□□□□□ -0.33
CTSA-201ENST00000191018 TM2D2Q9BX73 214 aa12.99□□□□□ -0.33
CTSA-201ENST00000191018 IGLV5-45A0A087WSX0 123 aa12.98□□□□□ -0.33
CTSA-201ENST00000191018 AMMECR1LQ6DCA0 310 aa12.98□□□□□ -0.33
CTSA-201ENST00000191018 Q6ZVH6 145 aa12.98□□□□□ -0.33
CTSA-201ENST00000191018 PLEKHB2Q96CS7 222 aa12.98□□□□□ -0.33
CTSA-201ENST00000191018 COX11Q9Y6N1 276 aa12.98□□□□□ -0.33
CTSA-201ENST00000191018 PAX4O43316 350 aa12.97□□□□□ -0.33
CTSA-201ENST00000191018 ATP5G1P05496 136 aa12.97□□□□□ -0.33
CTSA-201ENST00000191018 SAMD5Q5TGI4 173 aa12.97□□□□□ -0.33
CTSA-201ENST00000191018 CEND1Q8N111 149 aa12.97□□□□□ -0.33
CTSA-201ENST00000191018 VSIG2Q96IQ7 327 aa12.97□□□□□ -0.33
CTSA-201ENST00000191018 A6NDN8 102 aa12.97□□□□□ -0.33
CTSA-201ENST00000191018 GCSHP23434 173 aa12.97□□□□□ -0.33
CTSA-201ENST00000191018 DNAH3Q8TD57 4116 aa12.97□□□□□ -0.33
CTSA-201ENST00000191018 COL6A5A8TX70 2615 aa12.96□□□□□ -0.33
CTSA-201ENST00000191018 LGALS3P17931 250 aaKnown RBP12.96□□□□□ -0.33
CTSA-201ENST00000191018 FXYD2P54710 66 aa12.96□□□□□ -0.33
CTSA-201ENST00000191018 LINC00242Q5T6M2 205 aa12.96□□□□□ -0.33
CTSA-201ENST00000191018 TMEM101Q96IK0 257 aa12.96□□□□□ -0.33
CTSA-201ENST00000191018 GEMIN7Q9H840 131 aaKnown RBP12.96□□□□□ -0.33
CTSA-201ENST00000191018 IGHV3-30-3P0DP02 117 aa12.95□□□□□ -0.34
CTSA-201ENST00000191018 IGHV3-64A0A075B6Q5 118 aa12.95□□□□□ -0.34
CTSA-201ENST00000191018 IGHV1-58A0A0C4DH39 117 aa12.95□□□□□ -0.34
CTSA-201ENST00000191018 A0A0J9YY99 117 aa12.95□□□□□ -0.34
CTSA-201ENST00000191018 SCGB1D4Q6XE38 83 aa12.95□□□□□ -0.34
CTSA-201ENST00000191018 LINC00469Q8N7U9 141 aa12.95□□□□□ -0.34
CTSA-201ENST00000191018 TEX48A0A1B0GUV7 120 aa12.94□□□□□ -0.34
CTSA-201ENST00000191018 K7EP13 123 aa12.94□□□□□ -0.34
CTSA-201ENST00000191018 HERVK_113P63121 156 aa12.94□□□□□ -0.34
CTSA-201ENST00000191018 COX6A2Q02221 97 aa12.94□□□□□ -0.34
CTSA-201ENST00000191018 GAGE6Q13070 117 aa12.94□□□□□ -0.34
CTSA-201ENST00000191018 HIST1H4GQ99525 98 aa12.94□□□□□ -0.34
CTSA-201ENST00000191018 CDKN2A-AS1Q9UH64 79 aa12.94□□□□□ -0.34
CTSA-201ENST00000191018 TRAV8-3A0A0A6YYJ7 113 aa12.93□□□□□ -0.34
CTSA-201ENST00000191018 CHCHD5Q9BSY4 110 aa12.93□□□□□ -0.34
CTSA-201ENST00000191018 RETNQ9HD89 108 aa12.93□□□□□ -0.34
CTSA-201ENST00000191018 H3BRM9 83 aa12.92□□□□□ -0.34
CTSA-201ENST00000191018 ANK2Q01484 3957 aa12.92□□□□□ -0.34
CTSA-201ENST00000191018 IGLV4-60A0A075B6I1 120 aa12.91□□□□□ -0.34
CTSA-201ENST00000191018 TRAV13-1A0A0B4J241 112 aa12.91□□□□□ -0.34
CTSA-201ENST00000191018 SPINK8P0C7L1 97 aa12.91□□□□□ -0.34
CTSA-201ENST00000191018 SPANXB1Q9NS25 103 aaPredicted RBP12.91□□□□□ -0.34
CTSA-201ENST00000191018 TRAV26-1A0A087WT03 109 aa12.91□□□□□ -0.34
CTSA-201ENST00000191018 F5H768 121 aa12.91□□□□□ -0.34
CTSA-201ENST00000191018 A0A096LPF7 62 aa12.89□□□□□ -0.35
CTSA-201ENST00000191018 PTTG1IPP53801 180 aa12.89□□□□□ -0.35
CTSA-201ENST00000191018 C12orf74Q32Q52 190 aa12.89□□□□□ -0.35
CTSA-201ENST00000191018 C10orf126Q8N4M7 172 aa12.89□□□□□ -0.35
CTSA-201ENST00000191018 C11orf68Q9H3H3 251 aaKnown RBP12.89□□□□□ -0.35
CTSA-201ENST00000191018 IGLV5-39A0A0G2JS06 123 aa12.88□□□□□ -0.35
CTSA-201ENST00000191018 A0A1B0GUV1 79 aa12.88□□□□□ -0.35
CTSA-201ENST00000191018 SMIM13P0DJ93 91 aa12.87□□□□□ -0.35
CTSA-201ENST00000191018 HTN3P15516 51 aa12.87□□□□□ -0.35
CTSA-201ENST00000191018 SRSF9Q13242 221 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTSA-201ENST00000191018 ZFAND6Q6FIF0 208 aa12.87□□□□□ -0.35
CTSA-201ENST00000191018 NHP2Q9NX24 153 aaKnown RBP12.87□□□□□ -0.35
CTSA-201ENST00000191018 A0A0J9YXY3 114 aa12.86□□□□□ -0.35
CTSA-201ENST00000191018 C9orf118A6NHY6 69 aa12.86□□□□□ -0.35
CTSA-201ENST00000191018 MRPL23Q16540 153 aaKnown RBP12.86□□□□□ -0.35
CTSA-201ENST00000191018 SMIM1B2RUZ4 78 aa12.85□□□□□ -0.35
CTSA-201ENST00000191018 NDUFA12Q9UI09 145 aa12.85□□□□□ -0.35
CTSA-201ENST00000191018 A0A1B0GWB2 263 aa12.85□□□□□ -0.35
CTSA-201ENST00000191018 IGHV3-30P01768 117 aa12.85□□□□□ -0.35
CTSA-201ENST00000191018 IGHV3-30-5P0DP03 117 aa12.85□□□□□ -0.35
CTSA-201ENST00000191018 RBX1P62877 108 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms