RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TNFRSF13BO14836 293 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-201ENST00000011700 FAM30AQ9NZY2 134 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 Q8N9W7 124 aa4.61□□□□□ -1.67
VPS13D-201ENST00000011700 CCKP06307 115 aa4.61□□□□□ -1.67
VPS13D-201ENST00000011700 UBE2D1P51668 147 aa4.61□□□□□ -1.67
VPS13D-201ENST00000011700 TMEM223A0PJW6 202 aa4.61□□□□□ -1.67
VPS13D-201ENST00000011700 C11orf45Q8TAV5 145 aa4.61□□□□□ -1.67
VPS13D-201ENST00000011700 M0R378 163 aa4.61□□□□□ -1.67
VPS13D-201ENST00000011700 C11orf53Q8IXP5 236 aa4.61□□□□□ -1.67
VPS13D-201ENST00000011700 WFDC11Q8NEX6 87 aa4.61□□□□□ -1.67
VPS13D-201ENST00000011700 TP53AIP1Q9HCN2 124 aa4.61□□□□□ -1.67
VPS13D-201ENST00000011700 PROK2Q9HC23 129 aa4.61□□□□□ -1.67
VPS13D-201ENST00000011700 RSPO1Q2MKA7 263 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-201ENST00000011700 RUSC1-AS1Q66K80 236 aa4.61□□□□□ -1.67
VPS13D-201ENST00000011700 Q8IZM0 81 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 TPSG1Q9NRR2 321 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 IGLC6P0CF74 106 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 WT1P19544 449 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-201ENST00000011700 CXCL6P80162 114 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 C10orf25Q5T742 122 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 LOC107984640A0A0U1RRK4 108 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 LYPD6Q86Y78 171 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 CR1P17927 2039 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 TRBV6-8A0A0A6YYG3 113 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 HIGD2AQ9BW72 106 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 BRI3O95415 125 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 RPL28P46779 137 aaKnown RBP4.6□□□□□ -1.67
VPS13D-201ENST00000011700 NUPR2A6NF83 97 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 C20orf197Q8N268 126 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 NBEAL1Q6ZS30 2694 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 ODF3BA8MYP8 253 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 Q9HAA7 133 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 hDV103S1A0JD37 113 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 MLANAQ16655 118 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 ATRQ13535 2644 aa4.6□□□□□ -1.67
VPS13D-201ENST00000011700 IGHV3-33P01772 117 aa4.59□□□□□ -1.67
VPS13D-201ENST00000011700 F8W735 103 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-201ENST00000011700 A0A0U1RQV1 116 aa4.59□□□□□ -1.67
VPS13D-201ENST00000011700 MGAM2Q2M2H8 2515 aa4.59□□□□□ -1.67
VPS13D-201ENST00000011700 A0A0J9YY99 117 aa4.59□□□□□ -1.67
VPS13D-201ENST00000011700 IGLV2-23P01705 113 aa4.59□□□□□ -1.67
VPS13D-201ENST00000011700 CLPSL2Q6UWE3 100 aa4.59□□□□□ -1.67
VPS13D-201ENST00000011700 KLK12Q9UKR0 248 aa4.59□□□□□ -1.67
VPS13D-201ENST00000011700 EBI3Q14213 229 aa4.59□□□□□ -1.68
VPS13D-201ENST00000011700 CFAP46Q8IYW2 2715 aa4.59□□□□□ -1.68
VPS13D-201ENST00000011700 Q6ZQT7 251 aa4.59□□□□□ -1.68
VPS13D-201ENST00000011700 IGFL4Q6B9Z1 124 aa4.59□□□□□ -1.68
VPS13D-201ENST00000011700 LINC00482Q8N8I6 264 aa4.59□□□□□ -1.68
VPS13D-201ENST00000011700 CRYGDP07320 174 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 DEFB112Q30KQ8 113 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 IGHV4-28A0A0C4DH34 117 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 NHLRC4P0CG21 123 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-201ENST00000011700 PRR31Q5SQ13 230 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 Q8N976 141 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 IGLV4-69A0A075B6H9 119 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 RPL39P62891 51 aaKnown RBP4.58□□□□□ -1.68
VPS13D-201ENST00000011700 M0QY20 66 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 CFAP126Q5VTH2 177 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 CLEC2BQ92478 149 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 IGHV3-30P01768 117 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 IGHV3-30-5P0DP03 117 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 C1orf195Q5TG92 126 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 PRYO14603 147 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 IGHV4-59P01825 116 aa4.58□□□□□ -1.68
VPS13D-201ENST00000011700 H3BPC8 53 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
VPS13D-201ENST00000011700 LELP1Q5T871 98 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 RNASE8Q8TDE3 154 aaKnown RBP4.57□□□□□ -1.68
VPS13D-201ENST00000011700 LINC00526Q96FQ7 95 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 C9orf85Q96MD7 179 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 A0A087WZ39 114 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 CHCHD10Q8WYQ3 142 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-201ENST00000011700 C11orf1Q9H5F2 150 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 MAP6D1Q9H9H5 199 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 IGLV10-54A0A075B6I4 117 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 TRIAP1O43715 76 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 ASPHD1Q5U4P2 390 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 ENHOQ6UWT2 76 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 SIRPDQ9H106 197 aa4.57□□□□□ -1.68
VPS13D-201ENST00000011700 RNASE13Q5GAN3 156 aaKnown RBP4.57□□□□□ -1.68
VPS13D-201ENST00000011700 LY6G6EA0A0G2JKS1 128 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 K7EQG2 157 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 U3KQA8 63 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 TFF1P04155 84 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 SDIM1Q6ZPB5 146 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 IGLV4-3A0A075B6K6 122 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 LINC00269Q8N2A0 174 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 ZNF73O43830 326 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-201ENST00000011700 TRAV10A0A0B4J240 114 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 SLURP1P55000 103 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 IGLV2-14P01704 120 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 STAB1Q9NY15 2570 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 KLLNB2CW77 178 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 SYCNQ0VAF6 134 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 CTSZQ9UBR2 303 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 TRBV7-6A0A0J9YX20 115 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 LINC00205P59089 165 aa4.56□□□□□ -1.68
VPS13D-201ENST00000011700 A0A1B0GUV1 79 aa4.55□□□□□ -1.68
VPS13D-201ENST00000011700 PRB3Q04118 309 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms