RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W RAD18P10862 487 aa2.28□□□□□ -2.04
SEC16YPL085W MCM5P29496 775 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W FRD1P32614 470 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W JNM1P36224 373 aa2.28□□□□□ -2.04
SEC16YPL085W ECM13P38195 257 aa2.28□□□□□ -2.04
SEC16YPL085W EXO5P38289 585 aa2.28□□□□□ -2.04
SEC16YPL085W ETP1P38748 585 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W HXT13P39924 564 aa2.28□□□□□ -2.04
SEC16YPL085W SLM1P40485 686 aa2.28□□□□□ -2.04
SEC16YPL085W SNZ3P43545 298 aa2.28□□□□□ -2.04
SEC16YPL085W YJR107WP47145 328 aa2.28□□□□□ -2.04
SEC16YPL085W YGL082WP53155 381 aa2.28□□□□□ -2.04
SEC16YPL085W ZRG17P53735 605 aa2.28□□□□□ -2.04
SEC16YPL085W SNZ2P53824 298 aa2.28□□□□□ -2.04
SEC16YPL085W NSE5Q03718 556 aa2.28□□□□□ -2.04
SEC16YPL085W ERB1Q04660 807 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W TY4B-PA0A0B7P3V8 1104 aa2.28□□□□□ -2.04
SEC16YPL085W TUF1P02992 437 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W CHS2P14180 963 aa2.28□□□□□ -2.04
SEC16YPL085W YHR045WP38775 560 aa2.28□□□□□ -2.04
SEC16YPL085W CCC2P38995 1004 aa2.28□□□□□ -2.04
SEC16YPL085W EFM4P40516 257 aa2.28□□□□□ -2.04
SEC16YPL085W FAR7P43592 221 aa2.28□□□□□ -2.04
SEC16YPL085W RAD17P48581 401 aa2.28□□□□□ -2.04
SEC16YPL085W MUS81Q04149 632 aaPredicted RBP2.28□□□□□ -2.04
SEC16YPL085W PLM2Q04383 521 aa2.28□□□□□ -2.04
SEC16YPL085W YLR225CQ05948 407 aaKnown RBP2.28□□□□□ -2.04
SEC16YPL085W FRA1Q07825 749 aa2.28□□□□□ -2.04
SEC16YPL085W NOT5Q12514 560 aaPredicted RBP2.28□□□□□ -2.04
SEC16YPL085W MAS1P10507 462 aa2.27□□□□□ -2.05
SEC16YPL085W PFK1P16861 987 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W MNE1P24720 663 aa2.27□□□□□ -2.05
SEC16YPL085W RAD16P31244 790 aa2.27□□□□□ -2.05
SEC16YPL085W NDI1P32340 513 aa2.27□□□□□ -2.05
SEC16YPL085W SSE1P32589 693 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W TGL1P34163 548 aa2.27□□□□□ -2.05
SEC16YPL085W ALG3P38179 458 aa2.27□□□□□ -2.05
SEC16YPL085W SWC5P38326 303 aa2.27□□□□□ -2.05
SEC16YPL085W GAA1P39012 614 aa2.27□□□□□ -2.05
SEC16YPL085W BIM1P40013 344 aa2.27□□□□□ -2.05
SEC16YPL085W DSE1P40077 573 aa2.27□□□□□ -2.05
SEC16YPL085W KTR7P40504 517 aa2.27□□□□□ -2.05
SEC16YPL085W ATP2P00830 511 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W THR1P17423 357 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W SIR1P21691 654 aa2.27□□□□□ -2.05
SEC16YPL085W RIT1P23796 513 aa2.27□□□□□ -2.05
SEC16YPL085W YBL055CP34220 418 aaPredicted RBP2.27□□□□□ -2.05
SEC16YPL085W YKR015CP36111 568 aa2.27□□□□□ -2.05
SEC16YPL085W GIP1P38229 639 aa2.27□□□□□ -2.05
SEC16YPL085W CRP1P38845 465 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W RPT2P40327 437 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W BUD13P46947 266 aaPredicted RBP2.27□□□□□ -2.05
SEC16YPL085W ORC4P54791 529 aa2.27□□□□□ -2.05
SEC16YPL085W PRO2P54885 456 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W TRS130Q03660 1102 aa2.27□□□□□ -2.05
SEC16YPL085W PMT7Q06644 662 aa2.27□□□□□ -2.05
SEC16YPL085W ADF1Q2V2Q1 113 aa2.27□□□□□ -2.05
SEC16YPL085W HSH49Q99181 213 aaPredicted RBP2.27□□□□□ -2.05
SEC16YPL085W YOR111WQ99210 232 aa2.27□□□□□ -2.05
SEC16YPL085W RED1P14291 827 aa2.27□□□□□ -2.05
SEC16YPL085W STI1P15705 589 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SEC16YPL085W AAT2P23542 418 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W NGG1P32494 702 aa2.27□□□□□ -2.05
SEC16YPL085W YJL068CP40363 299 aa2.27□□□□□ -2.05
SEC16YPL085W INA22P40576 216 aa2.27□□□□□ -2.05
SEC16YPL085W DLD2P46681 530 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W GUP1P53154 560 aa2.27□□□□□ -2.05
SEC16YPL085W NMA2P53204 395 aa2.27□□□□□ -2.05
SEC16YPL085W LEU9Q12166 604 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W YOR338WQ99326 363 aa2.27□□□□□ -2.05
SEC16YPL085W CDC36P06100 191 aaPredicted RBP2.27□□□□□ -2.05
SEC16YPL085W RHO1P06780 209 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W SRP54P20424 541 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W PRE10P21242 288 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05 RIP-Chip
SEC16YPL085W DAL81P21657 970 aa2.27□□□□□ -2.05
SEC16YPL085W RAD51P25454 400 aa2.27□□□□□ -2.05
SEC16YPL085W SSE2P32590 693 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W THO1P40040 218 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W DIM1P41819 318 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W PSA1P41940 361 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W SIP4P46954 829 aa2.27□□□□□ -2.05
SEC16YPL085W YJL045WP47052 634 aa2.27□□□□□ -2.05
SEC16YPL085W IMA1P53051 589 aa2.27□□□□□ -2.05
SEC16YPL085W YGR053CP53234 283 aa2.27□□□□□ -2.05
SEC16YPL085W TUB4P53378 473 aa2.27□□□□□ -2.05
SEC16YPL085W DAK1P54838 584 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W BET4Q00618 327 aa2.27□□□□□ -2.05
SEC16YPL085W ADA2Q02336 434 aa2.27□□□□□ -2.05
SEC16YPL085W YPR147CQ06522 304 aaKnown RBP2.27□□□□□ -2.05
SEC16YPL085W KCS1Q12494 1050 aa2.27□□□□□ -2.05
SEC16YPL085W SEC39Q12745 709 aa2.27□□□□□ -2.05
SEC16YPL085W STE7P06784 515 aa2.27□□□□□ -2.05
SEC16YPL085W URA1P28272 314 aaPredicted RBP2.27□□□□□ -2.05
SEC16YPL085W SIP3P38717 1229 aa2.27□□□□□ -2.05
SEC16YPL085W FAA2P39518 744 aa2.27□□□□□ -2.05
SEC16YPL085W ELP2P42935 788 aa2.27□□□□□ -2.05
SEC16YPL085W BRE2P43132 505 aa2.27□□□□□ -2.05
SEC16YPL085W ATH1P48016 1211 aa2.27□□□□□ -2.05
SEC16YPL085W ROM1P53046 1155 aa2.27□□□□□ -2.05
SEC16YPL085W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
Retrieved 100 of 5,963 RNA–protein pairs in 86.5 ms