RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C MET16P18408 261 aaPredicted RBP13.23□□□□□ -0.29
PHO4YFR034C ADK2P26364 225 aa13.23□□□□□ -0.29
PHO4YFR034C FHL1P39521 936 aa13.23□□□□□ -0.29
PHO4YFR034C EMW1P42842 904 aaKnown RBP13.23□□□□□ -0.29
PHO4YFR034C SUB1P54000 292 aaKnown RBP13.23□□□□□ -0.29
PHO4YFR034C AAD15Q08361 143 aa13.23□□□□□ -0.29
PHO4YFR034C SPE3Q12074 293 aaKnown RBP13.23□□□□□ -0.29
PHO4YFR034C HOS1Q12214 470 aa13.23□□□□□ -0.29
PHO4YFR034C KGD2P19262 463 aaPredicted RBP13.22□□□□□ -0.29
PHO4YFR034C YIH1P25637 258 aa13.22□□□□□ -0.29
PHO4YFR034C YBR056WP38081 501 aa13.22□□□□□ -0.29
PHO4YFR034C LAM1P38851 1228 aa13.22□□□□□ -0.29
PHO4YFR034C TAF1P46677 1066 aa13.22□□□□□ -0.29
PHO4YFR034C TEP1P53916 434 aa13.22□□□□□ -0.29
PHO4YFR034C ARA2Q04212 335 aa13.22□□□□□ -0.29
PHO4YFR034C BUD22Q04347 519 aaKnown RBP13.22□□□□□ -0.29
PHO4YFR034C YDR338CQ05497 695 aa13.22□□□□□ -0.29
PHO4YFR034C ECM30Q06673 1274 aa13.22□□□□□ -0.29
PHO4YFR034C SDH2P21801 266 aa13.21□□□□□ -0.29
PHO4YFR034C BAS1P22035 811 aa13.21□□□□□ -0.29
PHO4YFR034C GID7P25569 745 aa13.21□□□□□ -0.29
PHO4YFR034C VPH1P32563 840 aaKnown RBP13.21□□□□□ -0.29
PHO4YFR034C DSS4P32601 143 aa13.21□□□□□ -0.29
PHO4YFR034C UTR2P32623 467 aa13.21□□□□□ -0.29
PHO4YFR034C GRS1P38088 690 aaKnown RBP13.21□□□□□ -0.29
PHO4YFR034C OAF1P39720 1047 aaPredicted RBP13.21□□□□□ -0.29
PHO4YFR034C YAT2P40017 923 aa13.21□□□□□ -0.29
PHO4YFR034C ATM1P40416 690 aa13.21□□□□□ -0.29
PHO4YFR034C YJL132WP47014 750 aa13.21□□□□□ -0.29
PHO4YFR034C FOL2P51601 243 aaKnown RBP13.21□□□□□ -0.29
PHO4YFR034C TAF6P53040 516 aa13.21□□□□□ -0.29
PHO4YFR034C NUT1P53114 1132 aa13.21□□□□□ -0.29
PHO4YFR034C UBX4P54730 416 aa13.21□□□□□ -0.29
PHO4YFR034C MTD1Q02046 320 aaKnown RBP13.21□□□□□ -0.29
PHO4YFR034C SLU7Q02775 382 aaKnown RBP13.21□□□□□ -0.29
PHO4YFR034C FMP30Q02883 468 aa13.21□□□□□ -0.29
PHO4YFR034C YPL034WQ03083 165 aa13.21□□□□□ -0.29
PHO4YFR034C ADI1Q03677 179 aa13.21□□□□□ -0.29
PHO4YFR034C GRX8Q05926 109 aa13.21□□□□□ -0.29
PHO4YFR034C LEA1Q08963 238 aaPredicted RBP13.21□□□□□ -0.29
PHO4YFR034C PUF2Q12221 1075 aaKnown RBP RIP-Chip data13.21□□□□□ -0.29not detected
PHO4YFR034C PMR1P13586 950 aa13.2□□□□□ -0.3
PHO4YFR034C MSD1P15179 658 aaKnown RBP13.2□□□□□ -0.3
PHO4YFR034C ARG1P22768 420 aa13.2□□□□□ -0.3
PHO4YFR034C AAD3P25612 363 aa13.2□□□□□ -0.3
PHO4YFR034C PMI40P29952 429 aaKnown RBP13.2□□□□□ -0.3
PHO4YFR034C HSM3P38348 480 aa13.2□□□□□ -0.3
PHO4YFR034C PFK26P40433 827 aaKnown RBP13.2□□□□□ -0.3
PHO4YFR034C OPT1P40897 799 aa13.2□□□□□ -0.3
PHO4YFR034C YJL107CP42947 387 aa13.2□□□□□ -0.3
PHO4YFR034C SLP1Q12232 587 aa13.2□□□□□ -0.3
PHO4YFR034C YLR422WQ06409 1932 aa13.19□□□□□ -0.3
PHO4YFR034C ATP1P07251 545 aaKnown RBP13.19□□□□□ -0.3
PHO4YFR034C PRP4P20053 465 aaKnown RBP13.19□□□□□ -0.3
PHO4YFR034C CAD1P24813 409 aaKnown RBP13.19□□□□□ -0.3
PHO4YFR034C PEP7P32609 515 aa13.19□□□□□ -0.3
PHO4YFR034C HSP78P33416 811 aa13.19□□□□□ -0.3
PHO4YFR034C PEX5P35056 612 aa13.19□□□□□ -0.3
PHO4YFR034C YEL028WP39989 153 aa13.19□□□□□ -0.3
PHO4YFR034C DPH1P40487 425 aaKnown RBP13.19□□□□□ -0.3
PHO4YFR034C YFL012WP43580 148 aa13.19□□□□□ -0.3
PHO4YFR034C RPS10BP46784 105 aaKnown RBP13.19□□□□□ -0.3
PHO4YFR034C HST2P53686 357 aa13.19□□□□□ -0.3
PHO4YFR034C YNL144CP53907 740 aa13.19□□□□□ -0.3
PHO4YFR034C RPS10AQ08745 105 aaPredicted RBP13.19□□□□□ -0.3
PHO4YFR034C SAM3Q08986 587 aa13.19□□□□□ -0.3
PHO4YFR034C YMR085WP0CF18 432 aa13.18□□□□□ -0.3
PHO4YFR034C AMS1P22855 1083 aa13.18□□□□□ -0.3
PHO4YFR034C MRE11P32829 692 aa13.18□□□□□ -0.3
PHO4YFR034C SIF2P38262 535 aa13.18□□□□□ -0.3
PHO4YFR034C SSP120P39931 234 aaKnown RBP13.18□□□□□ -0.3
PHO4YFR034C CNN1P43618 361 aa13.18□□□□□ -0.3
PHO4YFR034C TMA22P47089 198 aaPredicted RBP13.18□□□□□ -0.3
PHO4YFR034C PAN2P53010 1115 aaPredicted RBP13.18□□□□□ -0.3
PHO4YFR034C YML083CQ04526 418 aa13.18□□□□□ -0.3
PHO4YFR034C ECM22Q05958 814 aaPredicted RBP13.18□□□□□ -0.3
PHO4YFR034C PMT7Q06644 662 aa13.18□□□□□ -0.3
PHO4YFR034C SPE4Q12455 300 aa13.18□□□□□ -0.3
PHO4YFR034C HIS1P00498 297 aaKnown RBP13.17□□□□□ -0.3
PHO4YFR034C COY1P34237 679 aa13.17□□□□□ -0.3
PHO4YFR034C ECM1P39715 212 aa13.17□□□□□ -0.3
PHO4YFR034C EDC3P39998 551 aaKnown RBP13.17□□□□□ -0.3
PHO4YFR034C ARP9Q05123 467 aa13.17□□□□□ -0.3
PHO4YFR034C RIB2Q12362 591 aaKnown RBP13.17□□□□□ -0.3
PHO4YFR034C YCL068CP25593 260 aa13.16□□□□□ -0.3
PHO4YFR034C ADY2P25613 283 aa13.16□□□□□ -0.3
PHO4YFR034C HEM12P32347 362 aaPredicted RBP13.16□□□□□ -0.3
PHO4YFR034C PDB1P32473 366 aaKnown RBP13.16□□□□□ -0.3
PHO4YFR034C SMI1P32566 505 aa13.16□□□□□ -0.3
PHO4YFR034C VPS25P47142 202 aa13.16□□□□□ -0.3
PHO4YFR034C NRD1P53617 575 aaKnown RBP RIP-Chip data13.16□□□□□ -0.3not detected
PHO4YFR034C CEG1Q01159 459 aaPredicted RBP13.16□□□□□ -0.3
PHO4YFR034C YSH1Q06224 779 aaPredicted RBP13.16□□□□□ -0.3
PHO4YFR034C YEL077CQ3E7X8 1277 aa13.16□□□□□ -0.3
PHO4YFR034C YPT6Q99260 215 aa13.16□□□□□ -0.3
PHO4YFR034C UBR2Q07963 1872 aa13.15□□□□□ -0.3
PHO4YFR034C HSP60P19882 572 aaKnown RBP13.15□□□□□ -0.3
PHO4YFR034C MCM5P29496 775 aaKnown RBP13.15□□□□□ -0.3
PHO4YFR034C NDI1P32340 513 aa13.15□□□□□ -0.3
PHO4YFR034C CYM1P32898 989 aa13.15□□□□□ -0.3
Retrieved 100 of 5,963 RNA–protein pairs in 48 ms