RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W GUD1Q07729 489 aa2.09□□□□□ -2.08
YCK3YER123W MLH2Q07980 695 aa2.09□□□□□ -2.08
YCK3YER123W MET5P47169 1442 aa2.09□□□□□ -2.08
YCK3YER123W NTE1Q04958 1679 aa2.08□□□□□ -2.08
YCK3YER123W PRP16P15938 1071 aaPredicted RBP2.08□□□□□ -2.08
YCK3YER123W PPZ1P26570 692 aa2.08□□□□□ -2.08
YCK3YER123W BEM4P39011 633 aa2.08□□□□□ -2.08
YCK3YER123W BFA1P47113 574 aa2.08□□□□□ -2.08
YCK3YER123W YMR210WQ03649 449 aa2.08□□□□□ -2.08
YCK3YER123W YLR001CQ07895 862 aa2.08□□□□□ -2.08
YCK3YER123W YKU70P32807 602 aa2.07□□□□□ -2.08
YCK3YER123W DHR2P36009 735 aaPredicted RBP2.07□□□□□ -2.08
YCK3YER123W TOM71P38825 639 aaKnown RBP2.07□□□□□ -2.08
YCK3YER123W YGR054WP53235 642 aaKnown RBP2.07□□□□□ -2.08
YCK3YER123W VTC3Q02725 835 aa2.07□□□□□ -2.08
YCK3YER123W TFB2Q02939 513 aa2.07□□□□□ -2.08
YCK3YER123W RCR2Q03446 210 aaKnown RBP2.07□□□□□ -2.08
YCK3YER123W YLR407WQ06070 228 aa2.07□□□□□ -2.08
YCK3YER123W FPR4Q06205 392 aaPredicted RBP2.07□□□□□ -2.08
YCK3YER123W YTA7P40340 1379 aa2.07□□□□□ -2.08
YCK3YER123W YJU2P28320 278 aaPredicted RBP2.06□□□□□ -2.08
YCK3YER123W SCO2P38072 301 aa2.06□□□□□ -2.08
YCK3YER123W MET13P53128 600 aa2.06□□□□□ -2.08
YCK3YER123W YNL193WP53870 558 aa2.06□□□□□ -2.08
YCK3YER123W ATG2P53855 1592 aa2.06□□□□□ -2.08
YCK3YER123W CET1O13297 549 aaPredicted RBP2.06□□□□□ -2.08
YCK3YER123W HOP1P20050 605 aa2.06□□□□□ -2.08
YCK3YER123W TDA3P38758 523 aa2.06□□□□□ -2.08
YCK3YER123W MGS1P40151 587 aa2.06□□□□□ -2.08
YCK3YER123W PXA1P41909 870 aa2.06□□□□□ -2.08
YCK3YER123W RET2P43621 546 aa2.06□□□□□ -2.08
YCK3YER123W SDA1P53313 767 aaKnown RBP2.06□□□□□ -2.08
YCK3YER123W PPN1Q04119 674 aa2.06□□□□□ -2.08
YCK3YER123W PCL8Q08966 492 aa2.06□□□□□ -2.08
YCK3YER123W IME1P21190 360 aa2.05□□□□□ -2.08
YCK3YER123W SFP1P32432 683 aa2.05□□□□□ -2.08
YCK3YER123W RRP14P36080 434 aaKnown RBP2.05□□□□□ -2.08
YCK3YER123W CCL1P37366 393 aa2.05□□□□□ -2.08
YCK3YER123W YPT10P38146 199 aa2.05□□□□□ -2.08
YCK3YER123W BUD8P41698 603 aa2.05□□□□□ -2.08
YCK3YER123W YPS7Q06325 596 aa2.05□□□□□ -2.08
YCK3YER123W RSA1Q08932 381 aa2.05□□□□□ -2.08
YCK3YER123W SWI6P09959 803 aa2.04□□□□□ -2.08
YCK3YER123W CAP1P28495 268 aaKnown RBP2.04□□□□□ -2.08
YCK3YER123W CKB2P38930 258 aa2.04□□□□□ -2.08
YCK3YER123W AZF1P41696 914 aa2.04□□□□□ -2.08
YCK3YER123W SNU56Q03782 492 aaKnown RBP2.04□□□□□ -2.08
YCK3YER123W AHA1Q12449 350 aaKnown RBP2.04□□□□□ -2.08
YCK3YER123W RKR1Q04781 1562 aa2.04□□□□□ -2.08
YCK3YER123W RPS17AP02407 136 aaKnown RBP2.03□□□□□ -2.08
YCK3YER123W RPS17BP14127 136 aaKnown RBP2.03□□□□□ -2.08
YCK3YER123W RPL8AP17076 256 aaKnown RBP2.03□□□□□ -2.08
YCK3YER123W PPG1P32838 368 aa2.03□□□□□ -2.08
YCK3YER123W YGR153WP48238 217 aa2.03□□□□□ -2.08
YCK3YER123W ALG12P53730 551 aa2.03□□□□□ -2.08
YCK3YER123W NOP15P53927 220 aaPredicted RBP2.03□□□□□ -2.08
YCK3YER123W YNL058CP53947 316 aa2.03□□□□□ -2.08
YCK3YER123W TIM50Q02776 476 aa2.03□□□□□ -2.08
YCK3YER123W HLR1Q04429 423 aa2.03□□□□□ -2.08
YCK3YER123W STP4Q07351 490 aa2.03□□□□□ -2.08
YCK3YER123W CYK3Q07533 885 aa2.03□□□□□ -2.08
YCK3YER123W NOP14Q99207 810 aaKnown RBP2.03□□□□□ -2.08
YCK3YER123W GAL4P04386 881 aa2.02□□□□□ -2.09
YCK3YER123W LSB5P25369 354 aa2.02□□□□□ -2.09
YCK3YER123W PRE4P30657 266 aa2.02□□□□□ -2.09
YCK3YER123W CRG1P38892 291 aaRIP-Chip data2.02□□□□□ -2.09not detected
YCK3YER123W MNN1P39106 762 aa2.02□□□□□ -2.09
YCK3YER123W YEL025CP39991 1188 aa2.02□□□□□ -2.09
YCK3YER123W YJR096WP47137 282 aa2.02□□□□□ -2.09
YCK3YER123W TAF4P50105 388 aa2.02□□□□□ -2.09
YCK3YER123W IMP4P53941 290 aaKnown RBP2.02□□□□□ -2.09
YCK3YER123W NSE5Q03718 556 aa2.02□□□□□ -2.09
YCK3YER123W PNO1Q99216 274 aaKnown RBP2.02□□□□□ -2.09
YCK3YER123W PDR15Q04182 1529 aaKnown RBP2.02□□□□□ -2.09
YCK3YER123W YFL068WP0CX99 160 aa2.02□□□□□ -2.09
YCK3YER123W YLL066W-AP0CY00 160 aa2.02□□□□□ -2.09
YCK3YER123W YLL067W-AP0CY01 160 aa2.02□□□□□ -2.09
YCK3YER123W PRP19P32523 503 aaKnown RBP2.02□□□□□ -2.09
YCK3YER123W RKM3P38222 552 aa2.02□□□□□ -2.09
YCK3YER123W FTR1P40088 404 aa2.02□□□□□ -2.09
YCK3YER123W IES1P43579 692 aa2.02□□□□□ -2.09
YCK3YER123W ROK1P45818 564 aaPredicted RBP2.02□□□□□ -2.09
YCK3YER123W USA1Q03714 838 aa2.02□□□□□ -2.09
YCK3YER123W YLR281CQ05863 155 aa2.02□□□□□ -2.09
YCK3YER123W DRS2P39524 1355 aa2.01□□□□□ -2.09
YCK3YER123W NUM1Q00402 2748 aa2.01□□□□□ -2.09
YCK3YER123W ILS1P09436 1072 aaKnown RBP2.01□□□□□ -2.09
YCK3YER123W REV1P12689 985 aa2.01□□□□□ -2.09
YCK3YER123W SAN1P22470 610 aa2.01□□□□□ -2.09
YCK3YER123W SEC65P29478 273 aa2.01□□□□□ -2.09
YCK3YER123W FTH1P38310 465 aa2.01□□□□□ -2.09
YCK3YER123W PRM2P40534 656 aa2.01□□□□□ -2.09
YCK3YER123W RNH70P53331 553 aa2.01□□□□□ -2.09
YCK3YER123W BET4Q00618 327 aa2.01□□□□□ -2.09
YCK3YER123W AIM41Q12032 185 aa2.01□□□□□ -2.09
YCK3YER123W RPS21BQ3E754 87 aaKnown RBP2.01□□□□□ -2.09
YCK3YER123W ADR1P07248 1323 aa2□□□□□ -2.09
YCK3YER123W AAC1P04710 309 aa2□□□□□ -2.09
YCK3YER123W GLN4P13188 809 aaKnown RBP2□□□□□ -2.09
YCK3YER123W MAK32P23060 363 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms