RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM4	YER112W	GAL1	P04385	528 aa		4.29	□□□□□ -1.72
LSM4	YER112W	ADH4	P10127	382 aa		4.29	□□□□□ -1.72
LSM4	YER112W	STE12	P13574	688 aa		4.29	□□□□□ -1.72
LSM4	YER112W	TPM2	P40414	161 aa		4.29	□□□□□ -1.72
LSM4	YER112W	CPR8	P53728	308 aa		4.29	□□□□□ -1.72
LSM4	YER112W	CEG1	Q01159	459 aa	Predicted RBP	4.29	□□□□□ -1.72
LSM4	YER112W	RPS15	Q01855	142 aa	Known RBP	4.29	□□□□□ -1.72
LSM4	YER112W	USA1	Q03714	838 aa		4.29	□□□□□ -1.72
LSM4	YER112W	RIM13	Q03792	727 aa		4.29	□□□□□ -1.72
LSM4	YER112W	GFD1	Q04839	188 aa	Known RBP	4.29	□□□□□ -1.72
LSM4	YER112W	CRD1	Q07560	283 aa		4.29	□□□□□ -1.72
LSM4	YER112W	RRP6	Q12149	733 aa	Known RBP	4.29	□□□□□ -1.72
LSM4	YER112W	YOL114C	Q12322	202 aa		4.29	□□□□□ -1.72
LSM4	YER112W	ZPS1	Q12512	249 aa		4.29	□□□□□ -1.72
LSM4	YER112W	CTT1	P06115	562 aa		4.28	□□□□□ -1.72
LSM4	YER112W	RPA135	P22138	1203 aa	Known RBP	4.28	□□□□□ -1.72
LSM4	YER112W	PRP45	P28004	379 aa	Predicted RBP	4.28	□□□□□ -1.72
LSM4	YER112W	PMC1	P38929	1173 aa	Predicted RBP	4.28	□□□□□ -1.72
LSM4	YER112W	RRP8	P38961	392 aa	Known RBP	4.28	□□□□□ -1.72
LSM4	YER112W	VFA1	P40080	203 aa		4.28	□□□□□ -1.72
LSM4	YER112W	ASN1	P49089	572 aa	Known RBP	4.28	□□□□□ -1.72
LSM4	YER112W	COQ6	P53318	479 aa		4.28	□□□□□ -1.72
LSM4	YER112W	TEP1	P53916	434 aa		4.28	□□□□□ -1.72
LSM4	YER112W	WHI2	P12611	486 aa		4.27	□□□□□ -1.73
LSM4	YER112W	SAT4	P25333	603 aa	Known RBP	4.27	□□□□□ -1.73
LSM4	YER112W	UGP1	P32861	499 aa	Known RBP	4.27	□□□□□ -1.73
LSM4	YER112W	VPS27	P40343	622 aa	Known RBP	4.27	□□□□□ -1.73
LSM4	YER112W	HIS6	P40545	261 aa		4.27	□□□□□ -1.73
LSM4	YER112W	IMA5	P40884	581 aa		4.27	□□□□□ -1.73
LSM4	YER112W	IDS2	P46958	469 aa		4.27	□□□□□ -1.73
LSM4	YER112W	TRS31	Q03337	283 aa		4.27	□□□□□ -1.73
LSM4	YER112W	ENT2	Q05785	613 aa		4.27	□□□□□ -1.73
LSM4	YER112W	CPA2	P03965	1118 aa	Known RBP	4.26	□□□□□ -1.73
LSM4	YER112W	PHO81	P17442	1178 aa		4.26	□□□□□ -1.73
LSM4	YER112W	SDH8	P38345	138 aa		4.26	□□□□□ -1.73
LSM4	YER112W	QRI7	P43122	407 aa		4.26	□□□□□ -1.73
LSM4	YER112W	GAT1	P43574	510 aa		4.26	□□□□□ -1.73
LSM4	YER112W	BNA3	P47039	444 aa	Known RBP	4.26	□□□□□ -1.73
LSM4	YER112W	UBX4	P54730	416 aa		4.26	□□□□□ -1.73
LSM4	YER112W	VPS64	Q03944	604 aa		4.26	□□□□□ -1.73
LSM4	YER112W	AAD4	Q07747	329 aa		4.26	□□□□□ -1.73
LSM4	YER112W	CRT10	Q08226	957 aa		4.26	□□□□□ -1.73
LSM4	YER112W	SLK19	Q08581	821 aa	Known RBP	4.26	□□□□□ -1.73
LSM4	YER112W	OSW1	Q08692	278 aa		4.26	□□□□□ -1.73
LSM4	YER112W	APM3	P38153	483 aa		4.25	□□□□□ -1.73
LSM4	YER112W	LNP1	P38878	278 aa		4.25	□□□□□ -1.73
LSM4	YER112W	LTP1	P40347	161 aa		4.25	□□□□□ -1.73
LSM4	YER112W	POL31	P46957	487 aa		4.25	□□□□□ -1.73
LSM4	YER112W	MAD3	P47074	515 aa		4.25	□□□□□ -1.73
LSM4	YER112W	SAP4	P53036	818 aa		4.25	□□□□□ -1.73
LSM4	YER112W	COS12	P53053	380 aa		4.25	□□□□□ -1.73
LSM4	YER112W	YGL117W	P53133	265 aa		4.25	□□□□□ -1.73
LSM4	YER112W	RTS3	P53289	263 aa		4.25	□□□□□ -1.73
LSM4	YER112W	BRE1	Q07457	700 aa	Known RBP	4.25	□□□□□ -1.73
LSM4	YER112W	ULA1	Q12059	462 aa		4.25	□□□□□ -1.73
LSM4	YER112W	YMR084W	A2P2R3	262 aa		4.24	□□□□□ -1.73
LSM4	YER112W	AAC1	P04710	309 aa		4.24	□□□□□ -1.73
LSM4	YER112W	PIF1	P07271	859 aa		4.24	□□□□□ -1.73
LSM4	YER112W	RNR3	P21672	869 aa	Known RBP	4.24	□□□□□ -1.73
LSM4	YER112W	MSH1	P25846	959 aa		4.24	□□□□□ -1.73
LSM4	YER112W	RPS7A	P26786	190 aa	Known RBP	4.24	□□□□□ -1.73
LSM4	YER112W	STB5	P38699	743 aa		4.24	□□□□□ -1.73
LSM4	YER112W	STT3	P39007	718 aa	Known RBP	4.24	□□□□□ -1.73
LSM4	YER112W	OPT1	P40897	799 aa		4.24	□□□□□ -1.73
LSM4	YER112W	RPL7A	P05737	244 aa	Known RBP	4.23	□□□□□ -1.73
LSM4	YER112W	ADE5,7	P07244	802 aa	Known RBP	4.23	□□□□□ -1.73
LSM4	YER112W	MSS18	P08593	268 aa		4.23	□□□□□ -1.73
LSM4	YER112W	MIS1	P09440	975 aa	Known RBP	4.23	□□□□□ -1.73
LSM4	YER112W	SIR1	P21691	654 aa		4.23	□□□□□ -1.73
LSM4	YER112W	PTP1	P25044	335 aa		4.23	□□□□□ -1.73
LSM4	YER112W	CDC5	P32562	705 aa		4.23	□□□□□ -1.73
LSM4	YER112W	YHL041W	P38730	149 aa		4.23	□□□□□ -1.73
LSM4	YER112W	ARA2	Q04212	335 aa		4.23	□□□□□ -1.73
LSM4	YER112W	VMS1	Q04311	632 aa	Known RBP	4.23	□□□□□ -1.73
LSM4	YER112W	EIS1	Q05050	843 aa	Known RBP	4.23	□□□□□ -1.73
LSM4	YER112W	RPL7B	Q12213	244 aa	Known RBP	4.23	□□□□□ -1.73
LSM4	YER112W	HEM1	P09950	548 aa	Predicted RBP	4.22	□□□□□ -1.73
LSM4	YER112W	PGI1	P12709	554 aa	Known RBP	4.22	□□□□□ -1.73
LSM4	YER112W	PMA2	P19657	947 aa		4.22	□□□□□ -1.73
LSM4	YER112W	YCR061W	P25639	631 aa		4.22	□□□□□ -1.73
LSM4	YER112W	MRPL9	P31334	269 aa		4.22	□□□□□ -1.73
LSM4	YER112W	PTH2	P34222	208 aa		4.22	□□□□□ -1.73
LSM4	YER112W	RAD26	P40352	1085 aa		4.22	□□□□□ -1.73
LSM4	YER112W	FAF1	P40546	346 aa	Predicted RBP	4.22	□□□□□ -1.73
LSM4	YER112W	ACS1	Q01574	713 aa		4.22	□□□□□ -1.73
LSM4	YER112W	FMP30	Q02883	468 aa		4.22	□□□□□ -1.73
LSM4	YER112W	HIM1	Q06674	414 aa		4.22	□□□□□ -1.73
LSM4	YER112W	YPK1	P12688	680 aa	Known RBP	4.21	□□□□□ -1.74
LSM4	YER112W	YUR1	P26725	428 aa		4.21	□□□□□ -1.74
LSM4	YER112W	SWC3	P31376	625 aa		4.21	□□□□□ -1.74
LSM4	YER112W	YMC1	P32331	307 aa		4.21	□□□□□ -1.74
LSM4	YER112W	YPT10	P38146	199 aa		4.21	□□□□□ -1.74
LSM4	YER112W	MAM1	P40065	302 aa		4.21	□□□□□ -1.74
LSM4	YER112W	LAS21	P40367	830 aa		4.21	□□□□□ -1.74
LSM4	YER112W	CAB2	P40506	365 aa		4.21	□□□□□ -1.74
LSM4	YER112W	NET1	P47035	1189 aa		4.21	□□□□□ -1.74
LSM4	YER112W	SCS3	P53012	380 aa		4.21	□□□□□ -1.74
LSM4	YER112W	CPR6	P53691	371 aa	Known RBP	4.21	□□□□□ -1.74
LSM4	YER112W	ARG7	Q04728	441 aa		4.21	□□□□□ -1.74
LSM4	YER112W	IWR1	Q07532	353 aa	Predicted RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 73.6 ms