RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeast

Gene VPS60, Length 690 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS60	YDR486C	YEL028W	P39989	153 aa		11.06	□□□□□ -0.64
VPS60	YDR486C	ATM1	P40416	690 aa		11.06	□□□□□ -0.64
VPS60	YDR486C	TCB2	P48231	1178 aa		11.06	□□□□□ -0.64
VPS60	YDR486C	CPR6	P53691	371 aa	Known RBP	11.06	□□□□□ -0.64
VPS60	YDR486C	GRX8	Q05926	109 aa		11.06	□□□□□ -0.64
VPS60	YDR486C	SEY1	Q99287	776 aa		11.06	□□□□□ -0.64
VPS60	YDR486C	QCR6	P00127	147 aa		11.05	□□□□□ -0.64
VPS60	YDR486C	ARG4	P04076	463 aa	Predicted RBP	11.05	□□□□□ -0.64
VPS60	YDR486C	PYC1	P11154	1178 aa	Known RBP	11.05	□□□□□ -0.64
VPS60	YDR486C	HEM15	P16622	393 aa		11.05	□□□□□ -0.64
VPS60	YDR486C	MSR1	P38714	643 aa		11.05	□□□□□ -0.64
VPS60	YDR486C	PEX28	P38848	579 aa		11.05	□□□□□ -0.64
VPS60	YDR486C	SCC4	P40090	624 aa		11.05	□□□□□ -0.64
VPS60	YDR486C	SMX2	P40204	77 aa	Known RBP	11.05	□□□□□ -0.64
VPS60	YDR486C	UFE1	P41834	346 aa		11.05	□□□□□ -0.64
VPS60	YDR486C	EMW1	P42842	904 aa	Known RBP	11.05	□□□□□ -0.64
VPS60	YDR486C	RPS10B	P46784	105 aa	Known RBP	11.05	□□□□□ -0.64
VPS60	YDR486C	COQ6	P53318	479 aa		11.05	□□□□□ -0.64
VPS60	YDR486C	TRM112	P53738	135 aa	Predicted RBP	11.05	□□□□□ -0.64
VPS60	YDR486C	COG6	P53959	839 aa		11.05	□□□□□ -0.64
VPS60	YDR486C	STE23	Q06010	1027 aa		11.05	□□□□□ -0.64
VPS60	YDR486C	FRA1	Q07825	749 aa		11.05	□□□□□ -0.64
VPS60	YDR486C	RPS10A	Q08745	105 aa	Predicted RBP	11.05	□□□□□ -0.64
VPS60	YDR486C	IMA3	P0CW40	589 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	IMA4	P0CW41	589 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	PEX34	P25584	144 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	YME1	P32795	747 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	YBP1	P38315	674 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	CCT2	P39076	527 aa	Known RBP	11.04	□□□□□ -0.64
VPS60	YDR486C	YJL132W	P47014	750 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	YJR079W	P47126	109 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	MRX6	P48564	524 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	YPR003C	P53394	754 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	11.04	□□□□□ -0.64	RIP-Chip
VPS60	YDR486C	YMR027W	Q04371	470 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	ECM38	Q05902	660 aa	Predicted RBP	11.04	□□□□□ -0.64
VPS60	YDR486C	IMA2	Q08295	589 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	NRT1	Q08485	598 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	YOR387C	Q08910	206 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	YDR034W-B	Q6Q5X2	51 aa		11.04	□□□□□ -0.64
VPS60	YDR486C	APE1	P14904	514 aa		11.03	□□□□□ -0.64
VPS60	YDR486C	COQ8	P27697	501 aa		11.03	□□□□□ -0.64
VPS60	YDR486C	TAH11	P47112	604 aa		11.03	□□□□□ -0.64
VPS60	YDR486C	SHR3	Q02774	210 aa		11.03	□□□□□ -0.64
VPS60	YDR486C	YMR160W	Q03823	816 aa		11.03	□□□□□ -0.64
VPS60	YDR486C	INP2	Q03824	705 aa		11.03	□□□□□ -0.64
VPS60	YDR486C	SFH1	Q06168	426 aa		11.03	□□□□□ -0.64
VPS60	YDR486C	AAD15	Q08361	143 aa		11.03	□□□□□ -0.64
VPS60	YDR486C	RPB2	P08518	1224 aa	Known RBP	11.02	□□□□□ -0.65
VPS60	YDR486C	PPH22	P23595	377 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	TSR4	P25040	408 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	MET22	P32179	357 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	UTR2	P32623	467 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	SEC6	P32844	805 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	FUI1	P38196	639 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	KAP104	P38217	918 aa	Known RBP	11.02	□□□□□ -0.65
VPS60	YDR486C	YAT2	P40017	923 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	YIL161W	P40449	235 aa	Known RBP	11.02	□□□□□ -0.65
VPS60	YDR486C	MOB1	P40484	314 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	KTR7	P40504	517 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	ALA1	P40825	983 aa	Known RBP	11.02	□□□□□ -0.65
VPS60	YDR486C	IML2	P47031	731 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	URB2	P47108	1174 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	RTA1	P53047	317 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	TAN1	P53072	289 aa	Predicted RBP	11.02	□□□□□ -0.65
VPS60	YDR486C	YVH1	Q02256	364 aa	Known RBP	11.02	□□□□□ -0.65
VPS60	YDR486C	SWC7	Q06707	132 aa		11.02	□□□□□ -0.65
VPS60	YDR486C	CDC20	P26309	610 aa		11.01	□□□□□ -0.65
VPS60	YDR486C	PSE1	P32337	1089 aa	Known RBP	11.01	□□□□□ -0.65
VPS60	YDR486C	ATG12	P38316	186 aa		11.01	□□□□□ -0.65
VPS60	YDR486C	SAE2	P46946	345 aa		11.01	□□□□□ -0.65
VPS60	YDR486C	PRP24	P49960	444 aa	Known RBP	11.01	□□□□□ -0.65
VPS60	YDR486C	PCL10	P53124	433 aa		11.01	□□□□□ -0.65
VPS60	YDR486C	RPN4	Q03465	531 aa		11.01	□□□□□ -0.65
VPS60	YDR486C	USA1	Q03714	838 aa		11.01	□□□□□ -0.65
VPS60	YDR486C	ARP9	Q05123	467 aa		11.01	□□□□□ -0.65
VPS60	YDR486C	MPC54	Q08550	464 aa		11.01	□□□□□ -0.65
VPS60	YDR486C	AFI1	Q99222	893 aa		11.01	□□□□□ -0.65
VPS60	YDR486C	ERR1	P0CX10	437 aa		11	□□□□□ -0.65
VPS60	YDR486C	ERR2	P0CX11	437 aa		11	□□□□□ -0.65
VPS60	YDR486C	KAR4	P25583	335 aa		11	□□□□□ -0.65
VPS60	YDR486C	URA7	P28274	579 aa	Known RBP	11	□□□□□ -0.65
VPS60	YDR486C	PMI40	P29952	429 aa	Known RBP	11	□□□□□ -0.65
VPS60	YDR486C	PTC3	P34221	468 aa	Known RBP	11	□□□□□ -0.65
VPS60	YDR486C	KES1	P35844	434 aa	Known RBP	11	□□□□□ -0.65
VPS60	YDR486C	KTR4	P38131	464 aa		11	□□□□□ -0.65
VPS60	YDR486C	ERR3	P42222	437 aa		11	□□□□□ -0.65
VPS60	YDR486C	BST1	P43571	1029 aa		11	□□□□□ -0.65
VPS60	YDR486C	ZIP2	P53061	704 aa		11	□□□□□ -0.65
VPS60	YDR486C	ADI1	Q03677	179 aa		11	□□□□□ -0.65
VPS60	YDR486C	NSE5	Q03718	556 aa		11	□□□□□ -0.65
VPS60	YDR486C	YOR223W	Q12015	292 aa		11	□□□□□ -0.65
VPS60	YDR486C	RUD3	Q12234	484 aa	Known RBP	11	□□□□□ -0.65
VPS60	YDR486C	GID7	P25569	745 aa		10.99	□□□□□ -0.65
VPS60	YDR486C	ILV6	P25605	309 aa	Known RBP	10.99	□□□□□ -0.65
VPS60	YDR486C	SGE1	P33335	543 aa		10.99	□□□□□ -0.65
VPS60	YDR486C	OYE3	P41816	400 aa	Predicted RBP	10.99	□□□□□ -0.65
VPS60	YDR486C	LSB6	P42951	607 aa		10.99	□□□□□ -0.65
VPS60	YDR486C	CTK3	P46963	296 aa	Predicted RBP	10.99	□□□□□ -0.65
VPS60	YDR486C	TRF5	P48561	642 aa	Known RBP	10.99	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms