RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W AMA1P50082 593 aa2.93□□□□□ -1.94
VPS41YDR080W YGL039WP53183 348 aaKnown RBP2.93□□□□□ -1.94
VPS41YDR080W HCR1Q05775 265 aaKnown RBP2.93□□□□□ -1.94
VPS41YDR080W MET3P08536 511 aa2.93□□□□□ -1.94
VPS41YDR080W APN2P38207 520 aa2.93□□□□□ -1.94
VPS41YDR080W FMO1P38866 432 aa2.93□□□□□ -1.94
VPS41YDR080W SHR5P41912 237 aa2.93□□□□□ -1.94
VPS41YDR080W ARG5,6Q01217 863 aa2.93□□□□□ -1.94
VPS41YDR080W YLR455WQ06188 304 aa2.93□□□□□ -1.94
VPS41YDR080W NTG2Q08214 380 aa2.93□□□□□ -1.94
VPS41YDR080W ATG11Q12527 1178 aa2.93□□□□□ -1.94
VPS41YDR080W YLR422WQ06409 1932 aa2.92□□□□□ -1.94
VPS41YDR080W SIR3P06701 978 aa2.92□□□□□ -1.94
VPS41YDR080W SAM2P19358 384 aaKnown RBP2.92□□□□□ -1.94
VPS41YDR080W OPI1P21957 404 aa2.92□□□□□ -1.94
VPS41YDR080W FPR3P38911 411 aaKnown RBP2.92□□□□□ -1.94
VPS41YDR080W LIF1P53150 421 aa2.92□□□□□ -1.94
VPS41YDR080W FOL1P53848 824 aa2.92□□□□□ -1.94
VPS41YDR080W SNP1Q00916 300 aaPredicted RBP2.92□□□□□ -1.94
VPS41YDR080W MRH1Q12117 320 aaPredicted RBP2.92□□□□□ -1.94
VPS41YDR080W YLR125WQ12138 136 aa2.92□□□□□ -1.94
VPS41YDR080W NUC1P08466 329 aa2.92□□□□□ -1.94
VPS41YDR080W SUI2P20459 304 aaKnown RBP2.92□□□□□ -1.94
VPS41YDR080W KIN82P25341 720 aa2.92□□□□□ -1.94
VPS41YDR080W MSS51P32335 436 aa2.92□□□□□ -1.94
VPS41YDR080W VPS8P39702 1274 aa2.92□□□□□ -1.94
VPS41YDR080W YFL052WP43551 465 aa2.92□□□□□ -1.94
VPS41YDR080W MTR3P48240 250 aaPredicted RBP2.92□□□□□ -1.94
VPS41YDR080W UBC9P50623 157 aaPredicted RBP2.92□□□□□ -1.94
VPS41YDR080W MDR1P53258 950 aa2.92□□□□□ -1.94
VPS41YDR080W LSB1P53281 241 aa2.92□□□□□ -1.94
VPS41YDR080W VIP1Q06685 1146 aaKnown RBP2.92□□□□□ -1.94
VPS41YDR080W BET2P20133 325 aa2.91□□□□□ -1.94
VPS41YDR080W PPZ1P26570 692 aa2.91□□□□□ -1.94
VPS41YDR080W HOG1P32485 435 aa2.91□□□□□ -1.94
VPS41YDR080W MNN4P36044 1178 aa2.91□□□□□ -1.94
VPS41YDR080W YBR259WP38338 688 aa2.91□□□□□ -1.94
VPS41YDR080W YHL017WP38745 532 aa2.91□□□□□ -1.94
VPS41YDR080W MOB1P40484 314 aa2.91□□□□□ -1.94
VPS41YDR080W CCT7P42943 550 aaKnown RBP2.91□□□□□ -1.94
VPS41YDR080W AIM14P53109 570 aa2.91□□□□□ -1.94
VPS41YDR080W MFB1Q04922 465 aa2.91□□□□□ -1.94
VPS41YDR080W STO1P34160 861 aaKnown RBP2.91□□□□□ -1.94
VPS41YDR080W SHP1P34223 423 aa2.91□□□□□ -1.94
VPS41YDR080W MYO3P36006 1272 aa2.91□□□□□ -1.94
VPS41YDR080W KTR3P38130 404 aaPredicted RBP2.91□□□□□ -1.94
VPS41YDR080W PCM1P38628 557 aaKnown RBP2.91□□□□□ -1.94
VPS41YDR080W ECM1P39715 212 aa2.91□□□□□ -1.94
VPS41YDR080W FMP52P40008 231 aa2.91□□□□□ -1.94
VPS41YDR080W PRP31P49704 494 aaPredicted RBP2.91□□□□□ -1.94
VPS41YDR080W UGO1Q03327 502 aa2.91□□□□□ -1.94
VPS41YDR080W MRD1Q06106 887 aaKnown RBP2.91□□□□□ -1.94
VPS41YDR080W PDR18P53756 1333 aa2.91□□□□□ -1.94
VPS41YDR080W SPC42P36094 363 aa2.91□□□□□ -1.94
VPS41YDR080W VPS27P40343 622 aaKnown RBP2.91□□□□□ -1.94
VPS41YDR080W RPS15Q01855 142 aaKnown RBP2.91□□□□□ -1.94
VPS41YDR080W ATG33Q06485 197 aa2.91□□□□□ -1.94
VPS41YDR080W TAO3P40468 2376 aa2.9□□□□□ -1.94
VPS41YDR080W HMG1P12683 1054 aa2.9□□□□□ -1.94
VPS41YDR080W UBC1P21734 215 aaKnown RBP2.9□□□□□ -1.94
VPS41YDR080W CCR4P31384 837 aaKnown RBP2.9□□□□□ -1.94
VPS41YDR080W SEC6P32844 805 aa2.9□□□□□ -1.94
VPS41YDR080W TVP38P36164 337 aa2.9□□□□□ -1.94
VPS41YDR080W FLO10P36170 1169 aa2.9□□□□□ -1.94
VPS41YDR080W NMD2P38798 1089 aaKnown RBP2.9□□□□□ -1.94
VPS41YDR080W SFB3P38810 929 aa2.9□□□□□ -1.94
VPS41YDR080W YEL025CP39991 1188 aa2.9□□□□□ -1.94
VPS41YDR080W TPM2P40414 161 aa2.9□□□□□ -1.94
VPS41YDR080W PAN2P53010 1115 aaPredicted RBP2.9□□□□□ -1.94
VPS41YDR080W CDC45Q08032 650 aa2.9□□□□□ -1.94
VPS41YDR080W SGO1Q08490 590 aa2.9□□□□□ -1.94
VPS41YDR080W HFI1Q12060 488 aa2.9□□□□□ -1.94
VPS41YDR080W DCS2Q12123 353 aa2.9□□□□□ -1.94
VPS41YDR080W PUP3P25451 205 aaKnown RBP2.9□□□□□ -1.95
VPS41YDR080W THI4P32318 326 aa2.9□□□□□ -1.95
VPS41YDR080W YPT7P32939 208 aa2.9□□□□□ -1.95
VPS41YDR080W PEX6P33760 1030 aa2.9□□□□□ -1.95
VPS41YDR080W YNG2P38806 282 aaKnown RBP2.9□□□□□ -1.95
VPS41YDR080W YHR202WP38887 602 aa2.9□□□□□ -1.95
VPS41YDR080W DSS1P39112 969 aa2.9□□□□□ -1.95
VPS41YDR080W YNL195CP40168 261 aa2.9□□□□□ -1.95
VPS41YDR080W YTA12P40341 825 aa2.9□□□□□ -1.95
VPS41YDR080W FHN1P53279 174 aa2.9□□□□□ -1.95
VPS41YDR080W NHX1Q04121 633 aa2.9□□□□□ -1.95
VPS41YDR080W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
VPS41YDR080W MLH3Q12083 715 aa2.9□□□□□ -1.95
VPS41YDR080W RRD2Q12461 358 aa2.9□□□□□ -1.95
VPS41YDR080W COQ1P18900 473 aa2.89□□□□□ -1.95
VPS41YDR080W EMP70P32802 667 aa2.89□□□□□ -1.95
VPS41YDR080W YPT53P36019 220 aa2.89□□□□□ -1.95
VPS41YDR080W PCL5P38794 229 aa2.89□□□□□ -1.95
VPS41YDR080W RRP8P38961 392 aaKnown RBP2.89□□□□□ -1.95
VPS41YDR080W TEL2P53038 688 aa2.89□□□□□ -1.95
VPS41YDR080W SSZ1P38788 538 aaKnown RBP2.89□□□□□ -1.95
VPS41YDR080W ESL1P40456 1118 aa2.89□□□□□ -1.95
VPS41YDR080W PCL10P53124 433 aa2.89□□□□□ -1.95
VPS41YDR080W SMX3P54999 86 aaPredicted RBP2.89□□□□□ -1.95
VPS41YDR080W SPE3Q12074 293 aaKnown RBP2.89□□□□□ -1.95
VPS41YDR080W APE1P14904 514 aa2.88□□□□□ -1.95
VPS41YDR080W RNR1P21524 888 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms