RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR1	YDL060W	NRG1	Q03125	231 aa		4.06	□□□□□ -1.76
TSR1	YDL060W	NSE5	Q03718	556 aa		4.06	□□□□□ -1.76
TSR1	YDL060W	MUS81	Q04149	632 aa	Predicted RBP	4.06	□□□□□ -1.76
TSR1	YDL060W	CRR1	Q05790	422 aa		4.06	□□□□□ -1.76
TSR1	YDL060W	CWC2	Q12046	339 aa	Predicted RBP	4.06	□□□□□ -1.76
TSR1	YDL060W	ARP7	Q12406	477 aa		4.06	□□□□□ -1.76
TSR1	YDL060W	BUD3	P25558	1636 aa		4.06	□□□□□ -1.76
TSR1	YDL060W	SAW1	P39735	261 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	ELO3	P40319	345 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	MAD3	P47074	515 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	NPA3	P47122	385 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	ZIP2	P53061	704 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	CPR6	P53691	371 aa	Known RBP	4.05	□□□□□ -1.76
TSR1	YDL060W	YMR206W	Q03695	313 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	CDC45	Q08032	650 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	DUR1,2	P32528	1835 aa	Known RBP	4.05	□□□□□ -1.76
TSR1	YDL060W	MLP1	Q02455	1875 aa	Known RBP	4.05	□□□□□ -1.76
TSR1	YDL060W	TY1B-A	O13527	1196 aa	Known RBP	4.05	□□□□□ -1.76
TSR1	YDL060W	SUP35	P05453	685 aa	Known RBP	4.05	□□□□□ -1.76
TSR1	YDL060W	GUK1	P15454	187 aa	Known RBP	4.05	□□□□□ -1.76
TSR1	YDL060W	NCP1	P16603	691 aa	Known RBP	4.05	□□□□□ -1.76
TSR1	YDL060W	PUP2	P32379	260 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	OAR1	P35731	278 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	YHR202W	P38887	602 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	DUN1	P39009	513 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	CAJ1	P39101	391 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	IRC6	P43615	237 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	AMA1	P50082	593 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	YBP2	P53169	641 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	MRPL13	Q02204	264 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	SML1	Q04964	104 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	DCS2	Q12123	353 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	ACF2	Q12168	779 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	TY1B-BR	Q12193	1756 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	TY1B-GR3	Q12316	1755 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	TY1B-OR	Q92393	1755 aa		4.05	□□□□□ -1.76
TSR1	YDL060W	VTH1	P40438	1549 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	VTH2	P40890	1549 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	YLR415C	O13578	112 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	PPR1	P07272	904 aa	Predicted RBP	4.04	□□□□□ -1.76
TSR1	YDL060W	DEP1	P31385	405 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	LTV1	P34078	463 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	PPE1	P38796	400 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	RIC1	P40395	1056 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	CIR1	P42940	261 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	BUL1	P48524	976 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	SLI1	P53304	468 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	SYF1	Q04048	859 aa	Predicted RBP	4.04	□□□□□ -1.76
TSR1	YDL060W	VID22	Q05934	901 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	MCH5	Q08777	521 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	FRE5	Q08908	694 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	TRM8	Q12009	286 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	YBR182C-A	Q8TGU6	64 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	Q0142	Q9ZZW4	58 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	PSK1	P31374	1356 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	NUC1	P08466	329 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	MTF2	P10849	440 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	TPM1	P17536	199 aa	Known RBP	4.04	□□□□□ -1.76
TSR1	YDL060W	YCL049C	P25577	312 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	PUG1	P40100	303 aa		4.04	□□□□□ -1.76
TSR1	YDL060W	RRT6	P53117	311 aa	Predicted RBP	4.04	□□□□□ -1.76
TSR1	YDL060W	RPO21	P04050	1733 aa	Known RBP	4.04	□□□□□ -1.76
TSR1	YDL060W	ADH4	P10127	382 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	GLN4	P13188	809 aa	Known RBP	4.03	□□□□□ -1.76
TSR1	YDL060W	BRF1	P29056	596 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	SCS2	P40075	244 aa	Known RBP	4.03	□□□□□ -1.76
TSR1	YDL060W	PFA3	P42836	336 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	YFL052W	P43551	465 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	PUS4	P48567	403 aa	Known RBP	4.03	□□□□□ -1.76
TSR1	YDL060W	MUP1	P50276	574 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	PIL1	P53252	339 aa	Known RBP	4.03	□□□□□ -1.76
TSR1	YDL060W	ARP5	P53946	755 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	ERG5	P54781	538 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	GYL1	Q04322	720 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	YDR286C	Q05530	114 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	THI21	Q08975	551 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	CAT8	P39113	1433 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	RAD51	P25454	400 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	DPH2	P32461	534 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	MOH1	P38191	138 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	RXT2	P38255	430 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	LRP1	P38801	184 aa	Known RBP	4.03	□□□□□ -1.76
TSR1	YDL060W	MEP1	P40260	492 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	GPI8	P49018	411 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	BTN2	P53286	410 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	CBK1	P53894	756 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	NGL1	Q08213	363 aa	Known RBP	4.03	□□□□□ -1.76
TSR1	YDL060W	SMC6	Q12749	1114 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	TY1B-JR2	P47100	1755 aa	Known RBP	4.03	□□□□□ -1.76
TSR1	YDL060W	TY1B-ER2	Q03619	1755 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	TY1B-MR1	Q04214	1755 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.03	□□□□□ -1.76
TSR1	YDL060W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.03	□□□□□ -1.76
TSR1	YDL060W	TY1B-NL1	Q12112	1755 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	TY1B-GR1	Q12141	1755 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	TY1B-BL	Q12490	1755 aa		4.03	□□□□□ -1.76
TSR1	YDL060W	SEM1	O94742	89 aa		4.02	□□□□□ -1.77
TSR1	YDL060W	CDC16	P09798	840 aa		4.02	□□□□□ -1.77
TSR1	YDL060W	CDC26	P14724	124 aa		4.02	□□□□□ -1.77
TSR1	YDL060W	UBC1	P21734	215 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms