RNA–Protein interactions for RNA: YCR068W

ATG15, Transcript of Lipase required for intravacuolar lysis of autophagic and Cvt bodies, yeast

Gene ATG15, Length 1,563 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG15	YCR068W	YNL144C	P53907	740 aa		10.14	□□□□□ -0.79
ATG15	YCR068W	NMA111	P53920	997 aa		10.14	□□□□□ -0.79
ATG15	YCR068W	YNL034W	P53963	612 aa		10.14	□□□□□ -0.79
ATG15	YCR068W	YNL018C	P53976	612 aa		10.14	□□□□□ -0.79
ATG15	YCR068W	INA17	Q02888	182 aa		10.14	□□□□□ -0.79
ATG15	YCR068W	YLR257W	Q06146	321 aa	Known RBP	10.14	□□□□□ -0.79
ATG15	YCR068W	YOR223W	Q12015	292 aa		10.14	□□□□□ -0.79
ATG15	YCR068W	AI5_ALPHA	Q9ZZX1	630 aa		10.14	□□□□□ -0.79
ATG15	YCR068W	HIS1	P00498	297 aa	Known RBP	10.13	□□□□□ -0.79
ATG15	YCR068W	KAR4	P25583	335 aa		10.13	□□□□□ -0.79
ATG15	YCR068W	URK1	P27515	501 aa		10.13	□□□□□ -0.79
ATG15	YCR068W	EDC3	P39998	551 aa	Known RBP	10.13	□□□□□ -0.79
ATG15	YCR068W	MAF1	P41910	395 aa		10.13	□□□□□ -0.79
ATG15	YCR068W	IML2	P47031	731 aa		10.13	□□□□□ -0.79
ATG15	YCR068W	YGR127W	P53275	312 aa		10.13	□□□□□ -0.79
ATG15	YCR068W	USA1	Q03714	838 aa		10.13	□□□□□ -0.79
ATG15	YCR068W	AAD15	Q08361	143 aa		10.13	□□□□□ -0.79
ATG15	YCR068W	NRT1	Q08485	598 aa		10.13	□□□□□ -0.79
ATG15	YCR068W	NDJ1	Q12366	352 aa		10.13	□□□□□ -0.79
ATG15	YCR068W	ENO2	P00925	437 aa	Known RBP	10.12	□□□□□ -0.79
ATG15	YCR068W	SPE1	P08432	466 aa		10.12	□□□□□ -0.79
ATG15	YCR068W	PDE1	P22434	369 aa		10.12	□□□□□ -0.79
ATG15	YCR068W	URA7	P28274	579 aa	Known RBP	10.12	□□□□□ -0.79
ATG15	YCR068W	SYN8	P31377	255 aa		10.12	□□□□□ -0.79
ATG15	YCR068W	SAF1	P38352	637 aa		10.12	□□□□□ -0.79
ATG15	YCR068W	OTU2	P38747	307 aa	Known RBP	10.12	□□□□□ -0.79
ATG15	YCR068W	PPE1	P38796	400 aa		10.12	□□□□□ -0.79
ATG15	YCR068W	NUP60	P39705	539 aa		10.12	□□□□□ -0.79
ATG15	YCR068W	ALA1	P40825	983 aa	Known RBP	10.12	□□□□□ -0.79
ATG15	YCR068W	UTP8	P53276	713 aa	Known RBP	10.12	□□□□□ -0.79
ATG15	YCR068W	MTF1	P14908	341 aa	Known RBP	10.11	□□□□□ -0.79
ATG15	YCR068W	TSR4	P25040	408 aa		10.11	□□□□□ -0.79
ATG15	YCR068W	MSH1	P25846	959 aa		10.11	□□□□□ -0.79
ATG15	YCR068W	OAF3	P36023	863 aa		10.11	□□□□□ -0.79
ATG15	YCR068W	SFB3	P38810	929 aa		10.11	□□□□□ -0.79
ATG15	YCR068W	YEL028W	P39989	153 aa		10.11	□□□□□ -0.79
ATG15	YCR068W	PSP1	P50896	841 aa	Known RBP	10.11	□□□□□ -0.79
ATG15	YCR068W	ZIP2	P53061	704 aa		10.11	□□□□□ -0.79
ATG15	YCR068W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	10.11	□□□□□ -0.79	not detected
ATG15	YCR068W	ILV2	P07342	687 aa	Known RBP	10.1	□□□□□ -0.79
ATG15	YCR068W	ILS1	P09436	1072 aa	Known RBP	10.1	□□□□□ -0.79
ATG15	YCR068W	AIM26	P32858	118 aa		10.1	□□□□□ -0.79
ATG15	YCR068W	KAP104	P38217	918 aa	Known RBP	10.1	□□□□□ -0.79
ATG15	YCR068W	YAT2	P40017	923 aa		10.1	□□□□□ -0.79
ATG15	YCR068W	RPS10B	P46784	105 aa	Known RBP	10.1	□□□□□ -0.79
ATG15	YCR068W	SNG1	P46950	547 aa		10.1	□□□□□ -0.79
ATG15	YCR068W	TAH11	P47112	604 aa		10.1	□□□□□ -0.79
ATG15	YCR068W	PIR3	Q03180	325 aa		10.1	□□□□□ -0.79
ATG15	YCR068W	INP2	Q03824	705 aa		10.1	□□□□□ -0.79
ATG15	YCR068W	RPS10A	Q08745	105 aa	Predicted RBP	10.1	□□□□□ -0.79
ATG15	YCR068W	ERR1	P0CX10	437 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	ERR2	P0CX11	437 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	HMG2	P12684	1045 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	ADY2	P25613	283 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	ATM1	P40416	690 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	ERR3	P42222	437 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	CNN1	P43618	361 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	KTR5	P53966	522 aa	Predicted RBP	10.09	□□□□□ -0.79
ATG15	YCR068W	BSP1	Q06604	576 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	MPC54	Q08550	464 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	YPQ1	Q12010	308 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	HOS1	Q12214	470 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	LPX1	Q12405	387 aa	Known RBP	10.09	□□□□□ -0.79
ATG15	YCR068W	RPB2	P08518	1224 aa	Known RBP	10.09	□□□□□ -0.79
ATG15	YCR068W	PEX1	P24004	1043 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	CDC20	P26309	610 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	ISF1	P32488	338 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	KES1	P35844	434 aa	Known RBP	10.09	□□□□□ -0.79
ATG15	YCR068W	EMW1	P42842	904 aa	Known RBP	10.09	□□□□□ -0.79
ATG15	YCR068W	ENT5	Q03769	411 aa	Known RBP	10.09	□□□□□ -0.79
ATG15	YCR068W	ECM38	Q05902	660 aa	Predicted RBP	10.09	□□□□□ -0.79
ATG15	YCR068W	UTP13	Q05946	817 aa	Known RBP	10.09	□□□□□ -0.79
ATG15	YCR068W	PIG1	Q06216	648 aa		10.09	□□□□□ -0.79
ATG15	YCR068W	CUE5	Q08412	411 aa	Known RBP	10.09	□□□□□ -0.79
ATG15	YCR068W	MIS1	P09440	975 aa	Known RBP	10.08	□□□□□ -0.8
ATG15	YCR068W	PAT1	P25644	796 aa	Known RBP	10.08	□□□□□ -0.8
ATG15	YCR068W	PMI40	P29952	429 aa	Known RBP	10.08	□□□□□ -0.8
ATG15	YCR068W	SEC6	P32844	805 aa		10.08	□□□□□ -0.8
ATG15	YCR068W	PTC3	P34221	468 aa	Known RBP	10.08	□□□□□ -0.8
ATG15	YCR068W	URA8	P38627	578 aa	Predicted RBP	10.08	□□□□□ -0.8
ATG15	YCR068W	VAC8	P39968	578 aa		10.08	□□□□□ -0.8
ATG15	YCR068W	UFE1	P41834	346 aa		10.08	□□□□□ -0.8
ATG15	YCR068W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	10.08	□□□□□ -0.8	not detected
ATG15	YCR068W	SLT2	Q00772	484 aa		10.08	□□□□□ -0.8
ATG15	YCR068W	YMR160W	Q03823	816 aa		10.08	□□□□□ -0.8
ATG15	YCR068W	ADE13	Q05911	482 aa	Known RBP	10.08	□□□□□ -0.8
ATG15	YCR068W	YCR051W	P25631	222 aa		10.07	□□□□□ -0.8
ATG15	YCR068W	UTR2	P32623	467 aa		10.07	□□□□□ -0.8
ATG15	YCR068W	SET3	P36124	751 aa		10.07	□□□□□ -0.8
ATG15	YCR068W	SMF2	P38778	549 aa		10.07	□□□□□ -0.8
ATG15	YCR068W	SPC97	P38863	823 aa		10.07	□□□□□ -0.8
ATG15	YCR068W	DPH1	P40487	425 aa	Known RBP	10.07	□□□□□ -0.8
ATG15	YCR068W	TAN1	P53072	289 aa	Predicted RBP	10.07	□□□□□ -0.8
ATG15	YCR068W	PSE1	P32337	1089 aa	Known RBP	10.06	□□□□□ -0.8
ATG15	YCR068W	HEM12	P32347	362 aa	Predicted RBP	10.06	□□□□□ -0.8
ATG15	YCR068W	PEX5	P35056	612 aa		10.06	□□□□□ -0.8
ATG15	YCR068W	ATG12	P38316	186 aa		10.06	□□□□□ -0.8
ATG15	YCR068W	DLD2	P46681	530 aa	Known RBP	10.06	□□□□□ -0.8
ATG15	YCR068W	LSC1	P53598	329 aa	Known RBP	10.06	□□□□□ -0.8
ATG15	YCR068W	MET14	Q02196	202 aa		10.06	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms