RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 TSHZ3Q63HK5 1081 aa21.06■□□□□ 0.96
PHGDH-227ENST00000641811 DCAF15Q66K64 600 aa21.06■□□□□ 0.96
PHGDH-227ENST00000641811 MIGA1Q8NAN2 632 aa21.06■□□□□ 0.96
PHGDH-227ENST00000641811 ZKSCAN4Q969J2 545 aaPredicted RBP21.06■□□□□ 0.96
PHGDH-227ENST00000641811 HOOK2Q96ED9 719 aa21.06■□□□□ 0.96
PHGDH-227ENST00000641811 WNK4Q96J92 1243 aa21.06■□□□□ 0.96
PHGDH-227ENST00000641811 AK9Q5TCS8 1911 aa21.06■□□□□ 0.96
PHGDH-227ENST00000641811 BAG3O95817 575 aa21.05■□□□□ 0.96
PHGDH-227ENST00000641811 MAP4K4O95819 1239 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-227ENST00000641811 HSPA8P11142 646 aaKnown RBP21.05■□□□□ 0.96
PHGDH-227ENST00000641811 GJA5P36382 358 aa21.05■□□□□ 0.96
PHGDH-227ENST00000641811 LBX1P52954 281 aa21.05■□□□□ 0.96
PHGDH-227ENST00000641811 PPP4CP60510 307 aa21.05■□□□□ 0.96
PHGDH-227ENST00000641811 AAMPQ13685 434 aa21.05■□□□□ 0.96
PHGDH-227ENST00000641811 OTUD7AQ8TE49 926 aaPredicted RBP21.05■□□□□ 0.96
PHGDH-227ENST00000641811 CNKSR2Q8WXI2 1034 aa21.05■□□□□ 0.96
PHGDH-227ENST00000641811 WRNIP1Q96S55 665 aa21.05■□□□□ 0.96
PHGDH-227ENST00000641811 HAUS7Q99871 368 aa21.05■□□□□ 0.96
PHGDH-227ENST00000641811 ECHDC1Q9NTX5 307 aa21.05■□□□□ 0.96
PHGDH-227ENST00000641811 PAG1Q9NWQ8 432 aa21.05■□□□□ 0.96
PHGDH-227ENST00000641811 DOCK2Q92608 1830 aa21.05■□□□□ 0.96
PHGDH-227ENST00000641811 IGSF3O75054 1194 aa21.04■□□□□ 0.96
PHGDH-227ENST00000641811 COL13A1Q5TAT6 717 aaPredicted RBP21.04■□□□□ 0.96
PHGDH-227ENST00000641811 ZNF341Q9BYN7 854 aa21.04■□□□□ 0.96
PHGDH-227ENST00000641811 ATRNL1Q5VV63 1379 aa21.03■□□□□ 0.96
PHGDH-227ENST00000641811 PDE6AP16499 860 aa21.03■□□□□ 0.96
PHGDH-227ENST00000641811 PLCG2P16885 1265 aa21.03■□□□□ 0.96
PHGDH-227ENST00000641811 INPP5BP32019 993 aa21.03■□□□□ 0.96
PHGDH-227ENST00000641811 SLC9C2Q5TAH2 1124 aa21.03■□□□□ 0.96
PHGDH-227ENST00000641811 TGFBRAP1Q8WUH2 860 aa21.03■□□□□ 0.96
PHGDH-227ENST00000641811 OPTNQ96CV9 577 aa21.03■□□□□ 0.96
PHGDH-227ENST00000641811 OSBPL5Q9H0X9 879 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-227ENST00000641811 CSADQ9Y600 493 aa21.03■□□□□ 0.96
PHGDH-227ENST00000641811 SNCAIPQ9Y6H5 919 aa21.03■□□□□ 0.96
PHGDH-227ENST00000641811 NPM3O75607 178 aaKnown RBP21.02■□□□□ 0.96
PHGDH-227ENST00000641811 TRPA1O75762 1119 aa21.02■□□□□ 0.96
PHGDH-227ENST00000641811 SLFNL1Q499Z3 407 aa21.02■□□□□ 0.96
PHGDH-227ENST00000641811 ANKRD45Q5TZF3 282 aa21.02■□□□□ 0.96
PHGDH-227ENST00000641811 MAPKAPK5Q8IW41 473 aa21.02■□□□□ 0.96
PHGDH-227ENST00000641811 RNF186Q9NXI6 227 aa21.02■□□□□ 0.96
PHGDH-227ENST00000641811 IGHDP01880 384 aa21.01■□□□□ 0.95
PHGDH-227ENST00000641811 ZBTB48P10074 688 aaPredicted RBP21.01■□□□□ 0.95
PHGDH-227ENST00000641811 GPATCH3Q96I76 525 aa21.01■□□□□ 0.95
PHGDH-227ENST00000641811 ZNF112Q9UJU3 913 aa21.01■□□□□ 0.95
PHGDH-227ENST00000641811 ZNF532Q9HCE3 1301 aa21.01■□□□□ 0.95
PHGDH-227ENST00000641811 TCRBV5S4A2TA0A5A2 114 aa21■□□□□ 0.95
PHGDH-227ENST00000641811 FAM196BA6NMK8 535 aa21■□□□□ 0.95
PHGDH-227ENST00000641811 CA12O43570 354 aa21■□□□□ 0.95
PHGDH-227ENST00000641811 CHGBP05060 677 aa21■□□□□ 0.95
PHGDH-227ENST00000641811 TM4SF4P48230 202 aa21■□□□□ 0.95
PHGDH-227ENST00000641811 REM2Q8IYK8 340 aaPredicted RBP21■□□□□ 0.95
PHGDH-227ENST00000641811 GCC1Q96CN9 775 aa21■□□□□ 0.95
PHGDH-227ENST00000641811 OTUD5Q96G74 571 aa21■□□□□ 0.95
PHGDH-227ENST00000641811 RWDD1Q9H446 243 aaPredicted RBP21■□□□□ 0.95
PHGDH-227ENST00000641811 PHF20L1A8MW92 1017 aa20.99■□□□□ 0.95
PHGDH-227ENST00000641811 FLT1P17948 1338 aa20.99■□□□□ 0.95
PHGDH-227ENST00000641811 MAGEB6P1A0A0J9YX57 407 aa20.98■□□□□ 0.95
PHGDH-227ENST00000641811 MANSC4A6NHS7 340 aaPredicted RBP20.98■□□□□ 0.95
PHGDH-227ENST00000641811 MAP3K10Q02779 954 aa20.98■□□□□ 0.95
PHGDH-227ENST00000641811 SREBF2Q12772 1141 aa20.98■□□□□ 0.95
PHGDH-227ENST00000641811 TMED8Q6PL24 325 aaPredicted RBP20.98■□□□□ 0.95
PHGDH-227ENST00000641811 RIOK1Q9BRS2 568 aaKnown RBP20.98■□□□□ 0.95
PHGDH-227ENST00000641811 PRDM10Q9NQV6 1147 aa20.98■□□□□ 0.95
PHGDH-227ENST00000641811 ZBTB47Q9UFB7 747 aaPredicted RBP20.98■□□□□ 0.95
PHGDH-227ENST00000641811 SAP30BPQ9UHR5 308 aaKnown RBP20.98■□□□□ 0.95
PHGDH-227ENST00000641811 CDK5RAP2Q96SN8 1893 aa20.98■□□□□ 0.95
PHGDH-227ENST00000641811 COL2A1P02458 1487 aaPredicted RBP20.97■□□□□ 0.95
PHGDH-227ENST00000641811 SPDYE5A6NIY4 337 aa20.97■□□□□ 0.95
PHGDH-227ENST00000641811 ADD2P35612 726 aa20.97■□□□□ 0.95
PHGDH-227ENST00000641811 ERO1BQ86YB8 467 aa20.97■□□□□ 0.95
PHGDH-227ENST00000641811 SAGE1Q9NXZ1 904 aa20.97■□□□□ 0.95
PHGDH-227ENST00000641811 PALD1Q9ULE6 856 aa20.97■□□□□ 0.95
PHGDH-227ENST00000641811 MX1P20591 662 aa20.96■□□□□ 0.95
PHGDH-227ENST00000641811 USP5P45974 858 aa20.96■□□□□ 0.95
PHGDH-227ENST00000641811 SLC4A8Q2Y0W8 1093 aa20.96■□□□□ 0.95
PHGDH-227ENST00000641811 B4GALNT3Q6L9W6 998 aa20.96■□□□□ 0.95
PHGDH-227ENST00000641811 SMC5Q8IY18 1101 aa20.96■□□□□ 0.95
PHGDH-227ENST00000641811 PI4K2BQ8TCG2 481 aa20.96■□□□□ 0.95
PHGDH-227ENST00000641811 MS4A4AQ96JQ5 239 aa20.96■□□□□ 0.95
PHGDH-227ENST00000641811 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.96■□□□□ 0.951e-14■□□□□ 11
PHGDH-227ENST00000641811 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.96■□□□□ 0.95
PHGDH-227ENST00000641811 TTC41PQ6P2S7 1318 aa20.96■□□□□ 0.95
PHGDH-227ENST00000641811 SALL3Q9BXA9 1300 aa20.96■□□□□ 0.95
PHGDH-227ENST00000641811 IGF2BP3O00425 579 aaKnown RBP eCLIP20.95■□□□□ 0.94
PHGDH-227ENST00000641811 TBC1D8O95759 1140 aa20.95■□□□□ 0.94
PHGDH-227ENST00000641811 NOL9Q5SY16 702 aaKnown RBP20.95■□□□□ 0.94
PHGDH-227ENST00000641811 IFNL1Q8IU54 200 aa20.95■□□□□ 0.94
PHGDH-227ENST00000641811 CERS3Q8IU89 383 aa20.95■□□□□ 0.94
PHGDH-227ENST00000641811 LCORLQ8N3X6 602 aa20.95■□□□□ 0.94
PHGDH-227ENST00000641811 FOCADQ5VW36 1801 aa20.94■□□□□ 0.94
PHGDH-227ENST00000641811 IRF6O14896 467 aa20.94■□□□□ 0.94
PHGDH-227ENST00000641811 TBC1D12O60347 775 aa20.94■□□□□ 0.94
PHGDH-227ENST00000641811 INHBEP58166 350 aa20.94■□□□□ 0.94
PHGDH-227ENST00000641811 PTPN18Q99952 460 aa20.94■□□□□ 0.94
PHGDH-227ENST00000641811 LNPKQ9C0E8 428 aa20.94■□□□□ 0.94
PHGDH-227ENST00000641811 DHX36Q9H2U1 1008 aaKnown RBP20.94■□□□□ 0.94
PHGDH-227ENST00000641811 ARMT1Q9H993 441 aa20.94■□□□□ 0.94
PHGDH-227ENST00000641811 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.94■□□□□ 0.94
PHGDH-227ENST00000641811 ERC2O15083 957 aa20.93■□□□□ 0.94
PHGDH-227ENST00000641811 PPIL2Q13356 520 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms