RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CARD10Q9BWT7 1032 aa16.77■□□□□ 0.28
CLN6-215ENST00000636674 H2AFXP16104 143 aaPredicted RBP16.77■□□□□ 0.27
CLN6-215ENST00000636674 ARID4AP29374 1257 aaPredicted RBP16.77■□□□□ 0.27
CLN6-215ENST00000636674 CDC27P30260 824 aa16.77■□□□□ 0.27
CLN6-215ENST00000636674 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.27
CLN6-215ENST00000636674 AIFM3Q96NN9 605 aa16.77■□□□□ 0.27
CLN6-215ENST00000636674 ZHX1Q9UKY1 873 aaPredicted RBP16.77■□□□□ 0.27
CLN6-215ENST00000636674 ZBTB43O43298 467 aa16.76■□□□□ 0.27
CLN6-215ENST00000636674 ATP1A3P13637 1013 aa16.76■□□□□ 0.27
CLN6-215ENST00000636674 LIFRP42702 1097 aa16.76■□□□□ 0.27
CLN6-215ENST00000636674 ETF1P62495 437 aaKnown RBP16.76■□□□□ 0.27
CLN6-215ENST00000636674 SLC9C2Q5TAH2 1124 aa16.76■□□□□ 0.27
CLN6-215ENST00000636674 GIGYF2Q6Y7W6 1299 aaKnown RBP16.76■□□□□ 0.27
CLN6-215ENST00000636674 TCRBV5S4A2TA0A5A2 114 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 SYT10Q6XYQ8 523 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 METTL16Q86W50 562 aaKnown RBP16.75■□□□□ 0.27
CLN6-215ENST00000636674 VSTM4Q8IW00 320 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 TTLL11Q8NHH1 800 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 LY9Q9HBG7 655 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 PIH1D3Q9NQM4 214 aaKnown RBP16.75■□□□□ 0.27
CLN6-215ENST00000636674 PRDM11Q9NQV5 511 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 DENND2AQ9ULE3 1009 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 UBN2Q6ZU65 1347 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 RANBP6O60518 1105 aaKnown RBP16.75■□□□□ 0.27
CLN6-215ENST00000636674 ITGA6P23229 1130 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 IARSP41252 1262 aaKnown RBP16.75■□□□□ 0.27
CLN6-215ENST00000636674 CTSWP56202 376 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 UBASH3AP57075 661 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 LDHAL6AQ6ZMR3 332 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 KRBA2Q6ZNG9 492 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 NKX2-3Q8TAU0 364 aa16.75■□□□□ 0.27
CLN6-215ENST00000636674 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLN6-215ENST00000636674 FAM217BQ9NTX9 383 aaPredicted RBP16.75■□□□□ 0.27
CLN6-215ENST00000636674 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.75■□□□□ 0.272e-8■■■□□ 18
CLN6-215ENST00000636674 UQCRFS1P1P0C7P4 283 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 PDE6AP16499 860 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 FAM193AP78312 1265 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 TRIM29Q14134 588 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 CCDC102BQ68D86 513 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.74■□□□□ 0.27
CLN6-215ENST00000636674 V9GYY5 206 aaPredicted RBP16.74■□□□□ 0.27
CLN6-215ENST00000636674 ITGB4P16144 1822 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 ZNF532Q9HCE3 1301 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 ANKRD18BA2A2Z9 1011 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 GOLGA8AA7E2F4 631 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 B4E1Z4 1266 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 PNOCQ13519 176 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 GNL2Q13823 731 aaKnown RBP16.74■□□□□ 0.27
CLN6-215ENST00000636674 OLFM4Q6UX06 510 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 NLRP10Q86W26 655 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 MICU3Q86XE3 530 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
CLN6-215ENST00000636674 STRBPQ96SI9 672 aaKnown RBP16.74■□□□□ 0.27
CLN6-215ENST00000636674 SRRTQ9BXP5 876 aaKnown RBP16.74■□□□□ 0.27
CLN6-215ENST00000636674 GREM2Q9H772 168 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 TBC1D2BQ9UPU7 963 aa16.74■□□□□ 0.27
CLN6-215ENST00000636674 BCORQ6W2J9 1755 aa16.73■□□□□ 0.27
CLN6-215ENST00000636674 NUP98P52948 1817 aa16.73■□□□□ 0.27
CLN6-215ENST00000636674 PDE8BO95263 885 aa16.73■□□□□ 0.27
CLN6-215ENST00000636674 FMNL1O95466 1100 aaPredicted RBP16.73■□□□□ 0.27
CLN6-215ENST00000636674 VPS72Q15906 364 aa16.73■□□□□ 0.27
CLN6-215ENST00000636674 WASF1Q92558 559 aa16.73■□□□□ 0.27
CLN6-215ENST00000636674 DPF2Q92785 391 aa16.73■□□□□ 0.27
CLN6-215ENST00000636674 PHKBQ93100 1093 aa16.73■□□□□ 0.27
CLN6-215ENST00000636674 NOL10Q9BSC4 688 aaKnown RBP16.73■□□□□ 0.27
CLN6-215ENST00000636674 BTG4Q9NY30 223 aa16.73■□□□□ 0.27
CLN6-215ENST00000636674 TMOD3Q9NYL9 352 aa16.73■□□□□ 0.27
CLN6-215ENST00000636674 KCNH3Q9ULD8 1083 aa16.73■□□□□ 0.27
CLN6-215ENST00000636674 SERPINC1P01008 464 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 IFNAR1P17181 557 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 MDM2Q00987 491 aaPredicted RBP16.72■□□□□ 0.27
CLN6-215ENST00000636674 TRIM65Q6PJ69 517 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 KRI1Q8N9T8 703 aaKnown RBP16.72■□□□□ 0.27
CLN6-215ENST00000636674 GJD4Q96KN9 370 aaPredicted RBP16.72■□□□□ 0.27
CLN6-215ENST00000636674 SENP2Q9HC62 589 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 HOOK1Q9UJC3 728 aaKnown RBP16.72■□□□□ 0.27
CLN6-215ENST00000636674 SLFN14P0C7P3 912 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 CFAP100Q494V2 611 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 TMEM67Q5HYA8 995 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 NT5DC1Q5TFE4 455 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 CREBRFQ8IUR6 639 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 TMEM139Q8IV31 216 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 NOSTRINQ8IVI9 506 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 CNNM3Q8NE01 707 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 MTA3Q9BTC8 594 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 CNNM2Q9H8M5 875 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 CNNM1Q9NRU3 951 aa16.72■□□□□ 0.27
CLN6-215ENST00000636674 ARHGAP6O43182 974 aa16.71■□□□□ 0.27
CLN6-215ENST00000636674 IDH1O75874 414 aaKnown RBP16.71■□□□□ 0.27
CLN6-215ENST00000636674 STARD3NLO95772 234 aa16.71■□□□□ 0.27
CLN6-215ENST00000636674 TOP1P11387 765 aaKnown RBP16.71■□□□□ 0.27
CLN6-215ENST00000636674 RXRAP19793 462 aa16.71■□□□□ 0.27
CLN6-215ENST00000636674 TBX2Q13207 712 aaPredicted RBP16.71■□□□□ 0.27
CLN6-215ENST00000636674 LONRF3Q496Y0 759 aa16.71■□□□□ 0.27
CLN6-215ENST00000636674 FOXP4Q8IVH2 680 aaPredicted RBP16.71■□□□□ 0.27
CLN6-215ENST00000636674 REXO1L1PQ8IX06 675 aa16.71■□□□□ 0.27
CLN6-215ENST00000636674 CLIC6Q96NY7 704 aa16.71■□□□□ 0.27
CLN6-215ENST00000636674 ZNF446Q9NWS9 450 aa16.71■□□□□ 0.27
CLN6-215ENST00000636674 WWC3Q9ULE0 1092 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms