RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 THEGQ9P2T0 379 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 RBM8AQ9Y5S9 174 aaKnown RBP9.93□□□□□ -0.82
GABRB3-216ENST00000628124 PARP1P09874 1014 aaKnown RBP9.93□□□□□ -0.82
GABRB3-216ENST00000628124 TBC1D8BQ0IIM8 1120 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 SLC9C2Q5TAH2 1124 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 Q6ZUG5 572 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 RBSNQ9H1K0 784 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 FANCD2Q9BXW9 1451 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 CASC4Q6P4E1 433 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 PDZD4Q76G19 769 aaPredicted RBP9.93□□□□□ -0.82
GABRB3-216ENST00000628124 RUFY3Q7L099 469 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 CERS3Q8IU89 383 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 LARP6Q9BRS8 491 aaKnown RBP9.93□□□□□ -0.82
GABRB3-216ENST00000628124 ELP1O95163 1332 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 SYT10Q6XYQ8 523 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 RILPQ96NA2 401 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 NUCKS1Q9H1E3 243 aaKnown RBP9.93□□□□□ -0.82
GABRB3-216ENST00000628124 CCDC169A6NNP5 214 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 BCRP11274 1271 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 MAN1A1P33908 653 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 HSP90AA5PQ58FG0 334 aa9.93□□□□□ -0.82
GABRB3-216ENST00000628124 THUMPD2Q9BTF0 503 aaKnown RBP9.93□□□□□ -0.82
GABRB3-216ENST00000628124 ATP5J2-PTCD1G3V325 749 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 NOP56O00567 594 aaKnown RBP9.92□□□□□ -0.82
GABRB3-216ENST00000628124 COG7P83436 770 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 PPP2R5EQ16537 467 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 USP48Q86UV5 1035 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 HAUS1Q96CS2 278 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 CCDC124Q96CT7 223 aaKnown RBP9.92□□□□□ -0.82
GABRB3-216ENST00000628124 NAIPQ13075 1403 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 PHBP35232 272 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 EVCP57679 992 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 PPP2R5DQ14738 602 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 MCM9Q9NXL9 1143 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 IFNKQ9P0W0 207 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 CNPY2Q9Y2B0 182 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 NSD2O96028 1365 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 NCOA2Q15596 1464 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 F8W031 263 aaPredicted RBP9.92□□□□□ -0.82
GABRB3-216ENST00000628124 FLOT1O75955 427 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 HARSP12081 509 aaKnown RBP9.92□□□□□ -0.82
GABRB3-216ENST00000628124 STX17P56962 302 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 PPP2R5CQ13362 524 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.92□□□□□ -0.82
GABRB3-216ENST00000628124 MIS12Q9H081 205 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 RAB17Q9H0T7 212 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 LARSQ9P2J5 1176 aaKnown RBP9.92□□□□□ -0.82
GABRB3-216ENST00000628124 PPME1Q9Y570 386 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 IL16Q14005 1332 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 PI4KAP2A4QPH2 592 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 ARHGEF35A5YM69 484 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 HMGB3O15347 200 aaKnown RBP9.92□□□□□ -0.82
GABRB3-216ENST00000628124 PI4KAP1Q8N8J0 262 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 NECAB1Q8N987 351 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 ARHGEF10LQ9HCE6 1279 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 PICK1Q9NRD5 415 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 CTTNBP2NLQ9P2B4 639 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 TPCN1Q9ULQ1 816 aa9.92□□□□□ -0.82
GABRB3-216ENST00000628124 PALM3A6NDB9 673 aaPredicted RBP9.91□□□□□ -0.82
GABRB3-216ENST00000628124 TPTE2Q6XPS3 522 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 PNMA8AQ86V59 439 aaPredicted RBP9.91□□□□□ -0.82
GABRB3-216ENST00000628124 ARHGAP45Q92619 1136 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 TRPC6Q9Y210 931 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 C9orf84Q5VXU9 1444 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 SECISBP2LQ93073 1101 aaKnown RBP9.91□□□□□ -0.82
GABRB3-216ENST00000628124 CCDC68Q9H2F9 335 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 AZI2Q9H6S1 392 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 OATP04181 439 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 NBPF14Q5TI25 921 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 BEGAINQ9BUH8 593 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 CCDC141Q6ZP82 1450 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 SPECC1L-ADORA2AF8WAN1 911 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 TTC4O95801 387 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 PHEXP78562 749 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 PRDM2Q13029 1718 aa9.91□□□□□ -0.82
GABRB3-216ENST00000628124 NR1I2O75469 434 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 LDHBP07195 334 aaKnown RBP9.9□□□□□ -0.82
GABRB3-216ENST00000628124 HSPA8P11142 646 aaKnown RBP9.9□□□□□ -0.82
GABRB3-216ENST00000628124 FAM160A1Q05DH4 1040 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 JADE1Q6IE81 842 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 FCHSD1Q86WN1 690 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 IPO11Q9UI26 975 aaKnown RBP9.9□□□□□ -0.82
GABRB3-216ENST00000628124 TTC41PQ6P2S7 1318 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 SP4Q02446 784 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 PDE4DQ08499 809 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 TRIM56Q9BRZ2 755 aaKnown RBP9.9□□□□□ -0.82
GABRB3-216ENST00000628124 PARP3Q9Y6F1 533 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 RNF113AO15541 343 aaKnown RBP9.9□□□□□ -0.82
GABRB3-216ENST00000628124 POLR2BP30876 1174 aaKnown RBP9.9□□□□□ -0.82
GABRB3-216ENST00000628124 MUM1Q2TAK8 710 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 USHBP1Q8N6Y0 703 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 MRRFQ96E11 262 aaKnown RBP9.9□□□□□ -0.82
GABRB3-216ENST00000628124 RPGRIP1Q96KN7 1286 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 PAG1Q9NWQ8 432 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 TRIM35Q9UPQ4 493 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 MAST3O60307 1309 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 PPFIA3O75145 1194 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 ZNF449Q6P9G9 518 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 KRBA2Q6ZNG9 492 aa9.9□□□□□ -0.82
GABRB3-216ENST00000628124 SPATS2Q86XZ4 545 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms