RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 ENO4A6NNW6 628 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 APBB1O00213 710 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 SASH1O94885 1247 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 BCRP11274 1271 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 MMP14P50281 582 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 ZXDAP98168 799 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 TRIM32Q13049 653 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 MAP2K5Q13163 448 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 PPIGQ13427 754 aaKnown RBP eCLIP4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 TRIM60Q495X7 471 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 AMOTQ4VCS5 1084 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 KRT40Q6A162 431 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 ADAM32Q8TC27 787 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 HAUS7Q99871 368 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 CERS4Q9HA82 394 aa4.23□□□□□ -1.73
SCARNA15.3-201ENST00000626315 REV3LO60673 3130 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 MYO1BO43795 1136 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 CLTBP09497 229 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 SIGLEC14Q08ET2 396 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 PPM1JQ5JR12 505 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 NBPF12Q5TAG4 269 aaPredicted RBP4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 FAM117BQ6P1L5 589 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 PSRC1Q6PGN9 363 aaPredicted RBP4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 EP400NLQ6ZTU2 488 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 DDX46Q7L014 1031 aaKnown RBP4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 ERO1BQ86YB8 467 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 ZGPATQ8N5A5 531 aaKnown RBP4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 GPR161Q8N6U8 529 aaKnown RBP4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 ARNTL2Q8WYA1 636 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 RUNDC1Q96C34 613 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 VEZTQ9HBM0 779 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 TMEM39AQ9NV64 488 aa4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 YBX2Q9Y2T7 364 aaKnown RBP4.22□□□□□ -1.73
SCARNA15.3-201ENST00000626315 TECTAO75443 2155 aa4.21□□□□□ -1.73
SCARNA15.3-201ENST00000626315 ZNF521Q96K83 1311 aa4.21□□□□□ -1.73
SCARNA15.3-201ENST00000626315 LCHNA4D1U4 455 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 USP17L3A6NCW0 530 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 USP17L4A6NCW7 530 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 SPDYE5A6NIY4 337 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 KBTBD13C9JR72 458 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 DNM1LO00429 736 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 IRF6O14896 467 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 PPM1GO15355 546 aaPredicted RBP4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 A1BGP04217 495 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 TLE2Q04725 743 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 VGLL4Q14135 290 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 TMEM240Q5SV17 173 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 LHX8Q68G74 356 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 USP17L1Q7RTZ2 530 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 TRMT44Q8IYL2 757 aaKnown RBP4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 SLC44A5Q8NCS7 719 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 ARRDC4Q8NCT1 418 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 CYP2W1Q8TAV3 490 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 GMLQ99445 158 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 EYA1Q99502 592 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 LSM14BQ9BX40 385 aaKnown RBP4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 SLC52A2Q9HAB3 445 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 BSDC1Q9NW68 430 aaPredicted RBP4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 KCNK4Q9NYG8 393 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 LMCD1Q9NZU5 365 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 PCDHA11Q9Y5I1 949 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 WDFY4Q6ZS81 3184 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 DDX60LQ5H9U9 1706 aaKnown RBP4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 ABCC4O15439 1325 aa4.21□□□□□ -1.74
SCARNA15.3-201ENST00000626315 SPTAN1Q13813 2472 aaKnown RBP4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 DCDC2CA8MYV0 355 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 H3BQ06 376 aaPredicted RBP4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 KIAA0355O15063 1070 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 MSCO60682 206 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 CYP2C8P10632 490 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 CYP2B6P20813 491 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 CCR10P46092 362 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 RABGGTBP53611 331 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 LMNB2Q03252 620 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 PPIL2Q13356 520 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 DLGAP5Q15398 846 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 TMEM67Q5HYA8 995 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 UNQ6494/PRO21346Q6UXR6 183 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 ZNF365Q70YC5 407 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 DCLK2Q8N568 766 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 KDF1Q8NAX2 398 aaPredicted RBP4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 GLIS3Q8NEA6 775 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 SMCR8Q8TEV9 937 aaPredicted RBP4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 FBXW7Q969H0 707 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 EDC4Q6P2E9 1401 aaKnown RBP4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 PLXNA3P51805 1871 aa4.2□□□□□ -1.74
SCARNA15.3-201ENST00000626315 ABCC12Q96J65 1359 aa4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 TMEM8BA6NDV4 472 aa4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 SRRM3A6NNA2 597 aaPredicted RBP4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 FGBP02675 491 aa4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 ZKSCAN1P17029 563 aaPredicted RBP4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 CNGA1P29973 690 aa4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 CCND3P30281 292 aaPredicted RBP4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 SHC2P98077 582 aa4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 CACNB2Q08289 660 aaPredicted RBP4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 GRB10Q13322 594 aa4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 GRAPQ13588 217 aa4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 MAP3K21Q5TCX8 1036 aa4.19□□□□□ -1.74
SCARNA15.3-201ENST00000626315 RASIP1Q5U651 963 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms