RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PTPN14Q15678 1187 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 IMMTQ16891 758 aaKnown RBP14.25□□□□□ -0.13
LITAF-221ENST00000622633 SARM1Q6SZW1 724 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 PI16Q6UXB8 463 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 TADA2BQ86TJ2 420 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 DHX40Q8IX18 779 aaKnown RBP14.25□□□□□ -0.13
LITAF-221ENST00000622633 EFCAB13Q8IY85 973 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 FAM89AQ96GI7 184 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 ISCA1Q9BUE6 129 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 PRDM11Q9NQV5 511 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 GJB4Q9NTQ9 266 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 PKD1L3Q7Z443 1732 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 A0A1B0GVL5 298 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 IPO7O95373 1038 aaKnown RBP14.25□□□□□ -0.13
LITAF-221ENST00000622633 TCIRG1Q13488 830 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 JAKMIP3Q5VZ66 844 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 CADPS2Q86UW7 1296 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 PUS7LQ9H0K6 701 aaKnown RBP14.25□□□□□ -0.13
LITAF-221ENST00000622633 ANO10Q9NW15 660 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 CLIC4Q9Y696 253 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 CPDO75976 1380 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 KLF18A0A0U1RQI7 1052 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 CAND2O75155 1236 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 SEC31AO94979 1220 aaKnown RBP14.24□□□□□ -0.13
LITAF-221ENST00000622633 EVCP57679 992 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 ARHGAP29Q52LW3 1261 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 KAT2BQ92831 832 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 C8orf76Q96K31 380 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 SDF4Q9BRK5 362 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 RTEL1Q9NZ71 1219 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 AKAP2Q9Y2D5 859 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 GOLGA8BA8MQT2 603 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 TBC1D8O95759 1140 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 PAX7P23759 505 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 SF3A1Q15459 793 aaKnown RBP14.24□□□□□ -0.13
LITAF-221ENST00000622633 LRRC8AQ8IWT6 810 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 FMR1NBQ8N0W7 255 aaPredicted RBP14.24□□□□□ -0.13
LITAF-221ENST00000622633 SYNE4Q8N205 404 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 MRPS27Q92552 414 aaKnown RBP14.24□□□□□ -0.13
LITAF-221ENST00000622633 ORC3Q9UBD5 711 aaPredicted RBP14.24□□□□□ -0.13
LITAF-221ENST00000622633 HPS5Q9UPZ3 1129 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 WDR17Q8IZU2 1322 aa14.24□□□□□ -0.13
LITAF-221ENST00000622633 COQ9O75208 318 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 NDUFA8P51970 172 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 TBC1D8BQ0IIM8 1120 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 MTA1Q13330 715 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 STK38Q15208 465 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 LRRFIP1Q32MZ4 808 aaKnown RBP14.23□□□□□ -0.13
LITAF-221ENST00000622633 FBXL16Q8N461 479 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 MRFAP1L1Q96HT8 127 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 NUCKS1Q9H1E3 243 aaKnown RBP14.23□□□□□ -0.13
LITAF-221ENST00000622633 L2HGDHQ9H9P8 463 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 ETAA1Q9NY74 926 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 ZFYP08048 801 aaPredicted RBP14.23□□□□□ -0.13
LITAF-221ENST00000622633 HNRNPH1P31943 449 aaKnown RBP14.23□□□□□ -0.13
LITAF-221ENST00000622633 ANTXR2P58335 489 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 C1QTNF12Q5T7M4 302 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 ADALQ6DHV7 355 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 KCNV1Q6PIU1 500 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 FILIP1Q7Z7B0 1213 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 MB21D2Q8IYB1 491 aaPredicted RBP14.23□□□□□ -0.13
LITAF-221ENST00000622633 AOPEPQ8N6M6 819 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 PRPF38AQ8NAV1 312 aaKnown RBP14.23□□□□□ -0.13
LITAF-221ENST00000622633 LINC00301Q8NCQ3 95 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 STAG1Q8WVM7 1258 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 TACO1Q9BSH4 297 aaKnown RBP14.23□□□□□ -0.13
LITAF-221ENST00000622633 LAMB4A4D0S4 1761 aa14.23□□□□□ -0.13
LITAF-221ENST00000622633 NKX1-1Q15270 411 aaPredicted RBP14.22□□□□□ -0.13
LITAF-221ENST00000622633 ZRSR1Q15695 479 aaKnown RBP14.22□□□□□ -0.13
LITAF-221ENST00000622633 APPBP2Q92624 585 aa14.22□□□□□ -0.13
LITAF-221ENST00000622633 GNL3LQ9NVN8 582 aaKnown RBP14.22□□□□□ -0.13
LITAF-221ENST00000622633 KCPQ6ZWJ8 1503 aa14.22□□□□□ -0.13
LITAF-221ENST00000622633 TJP1Q07157 1748 aa14.22□□□□□ -0.13
LITAF-221ENST00000622633 A0A087WUV0 522 aaPredicted RBP14.22□□□□□ -0.13
LITAF-221ENST00000622633 CPLX1O14810 134 aa14.22□□□□□ -0.13
LITAF-221ENST00000622633 MAFGO15525 162 aa14.22□□□□□ -0.13
LITAF-221ENST00000622633 IFIT5Q13325 482 aaKnown RBP14.22□□□□□ -0.13
LITAF-221ENST00000622633 ANKRD23Q86SG2 305 aa14.22□□□□□ -0.13
LITAF-221ENST00000622633 CEP57L1Q8IYX8 460 aa14.22□□□□□ -0.13
LITAF-221ENST00000622633 MICALL1Q8N3F8 863 aa14.22□□□□□ -0.13
LITAF-221ENST00000622633 ARGLU1Q9NWB6 273 aaPredicted RBP14.22□□□□□ -0.13
LITAF-221ENST00000622633 IRAK4Q9NWZ3 460 aa14.22□□□□□ -0.13
LITAF-221ENST00000622633 ZNF213O14771 459 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 GPAA1O43292 621 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 IL2RBP14784 551 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 ADCY2Q08462 1091 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 RALYLQ86SE5 291 aaKnown RBP14.21□□□□□ -0.13
LITAF-221ENST00000622633 NCOA7Q8NI08 942 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 DENND2AQ9ULE3 1009 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 A0A1W2PQ27 194 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 A0A1W2PQ64 194 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 A0A1W2PQD8 194 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 KIF28PB7ZC32 967 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 SKILP12757 684 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 ERCC3P19447 782 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 CCDC93Q567U6 631 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 CPLX2Q6PUV4 134 aaKnown RBP14.21□□□□□ -0.13
LITAF-221ENST00000622633 DNAJC14Q6Y2X3 702 aaPredicted RBP14.21□□□□□ -0.13
LITAF-221ENST00000622633 NKX2-3Q8TAU0 364 aa14.21□□□□□ -0.13
LITAF-221ENST00000622633 STRN4Q9NRL3 753 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms