RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 CCDC8Q9H0W5 538 aaPredicted RBP15.32■□□□□ 0.04
CHD1-212ENST00000614616 SCINQ9Y6U3 715 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 STX2P32856 288 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 SYNCQ9H7C4 482 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 FLOT1O75955 427 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.31■□□□□ 0.04
CHD1-212ENST00000614616 GAS2L3Q86XJ1 694 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 PLEKHA4Q9H4M7 779 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 NBPF10Q6P3W6 841 aaKnown RBP15.31■□□□□ 0.04
CHD1-212ENST00000614616 FBXO38Q6PIJ6 1188 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 KRT23Q9C075 422 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 PIK3R4Q99570 1358 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 RGS22Q8NE09 1264 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 MAP3K7O43318 606 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 PPP4R3AQ6IN85 833 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 CCDC68Q9H2F9 335 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 CNNM2Q9H8M5 875 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 SAMM50Q9Y512 469 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 COMMD10Q9Y6G5 202 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 FANCD2Q9BXW9 1451 aa15.31■□□□□ 0.04
CHD1-212ENST00000614616 BAG2O95816 211 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 STX17P56962 302 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 RTN1Q16799 776 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 MGARPQ8TDB4 240 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 MYO1AQ9UBC5 1043 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 TRIM75PA6NK02 468 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 KRT2P35908 639 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 ALS2CLQ60I27 953 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 SYTL4Q96C24 671 aaPredicted RBP15.3■□□□□ 0.04
CHD1-212ENST00000614616 EIF2AQ9BY44 585 aaKnown RBP15.3■□□□□ 0.04
CHD1-212ENST00000614616 MYH7P12883 1935 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 IGF1RP08069 1367 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 PRXQ9BXM0 1461 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 THOC2Q8NI27 1593 aaKnown RBP15.3■□□□□ 0.04
CHD1-212ENST00000614616 ASIC1P78348 528 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 CXorf38Q8TB03 319 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 CNOT10Q9H9A5 744 aaKnown RBP15.3■□□□□ 0.04
CHD1-212ENST00000614616 ESRRGP62508 458 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 ST13P4Q8IZP2 240 aaPredicted RBP15.3■□□□□ 0.04
CHD1-212ENST00000614616 DCTPP1Q9H773 170 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 PYCARDQ9ULZ3 195 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 AFAP1L2Q8N4X5 818 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 GUCY2FP51841 1108 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 NBPF14Q5TI25 921 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 TTC19Q6DKK2 380 aaPredicted RBP15.3■□□□□ 0.04
CHD1-212ENST00000614616 IQUBQ8NA54 791 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 GDAP1L1Q96MZ0 367 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 BLMP54132 1417 aaPredicted RBP15.3■□□□□ 0.04
CHD1-212ENST00000614616 PCYT1AP49585 367 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 NUTM2GQ5VZR2 741 aa15.3■□□□□ 0.04
CHD1-212ENST00000614616 PPP1R42Q7Z4L9 355 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 DRC3Q9H069 523 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 SATB1Q01826 763 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 PIK3R5Q8WYR1 880 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 MKNK2Q9HBH9 465 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 RANBP6O60518 1105 aaKnown RBP15.29■□□□□ 0.04
CHD1-212ENST00000614616 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.29■□□□□ 0.04
CHD1-212ENST00000614616 METTL24Q5JXM2 366 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 PAIP2BQ9ULR5 123 aaKnown RBP15.29■□□□□ 0.04
CHD1-212ENST00000614616 SEC31AO94979 1220 aaKnown RBP15.29■□□□□ 0.04
CHD1-212ENST00000614616 SLC9C1Q4G0N8 1177 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 NOC4LQ9BVI4 516 aaKnown RBP15.29■□□□□ 0.04
CHD1-212ENST00000614616 ZBTB40Q9NUA8 1239 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 NR1I2O75469 434 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 TEX11Q8IYF3 940 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 RILPQ96NA2 401 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 IFIH1Q9BYX4 1025 aaKnown RBP15.29■□□□□ 0.04
CHD1-212ENST00000614616 ADAM21Q9UKJ8 722 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 MYH15Q9Y2K3 1946 aa15.29■□□□□ 0.04
CHD1-212ENST00000614616 TBCAO75347 108 aaKnown RBP15.28■□□□□ 0.04
CHD1-212ENST00000614616 FLIIQ13045 1269 aa15.28■□□□□ 0.04
CHD1-212ENST00000614616 GAS8O95995 478 aa15.28■□□□□ 0.04
CHD1-212ENST00000614616 CHMLP26374 656 aa15.28■□□□□ 0.04
CHD1-212ENST00000614616 WTAPQ15007 396 aa15.28■□□□□ 0.04
CHD1-212ENST00000614616 UAP1Q16222 522 aaPredicted RBP15.28■□□□□ 0.04
CHD1-212ENST00000614616 CAPRIN2Q6IMN6 1127 aaKnown RBP15.28■□□□□ 0.04
CHD1-212ENST00000614616 ABTB2Q8N961 1025 aa15.28■□□□□ 0.04
CHD1-212ENST00000614616 F6X3S4 739 aa15.28■□□□□ 0.04
CHD1-212ENST00000614616 PRAM1Q96QH2 718 aa15.28■□□□□ 0.04
CHD1-212ENST00000614616 EHMT1Q9H9B1 1298 aa15.28■□□□□ 0.04
CHD1-212ENST00000614616 PTPDC1A2A3K4 754 aa15.28■□□□□ 0.04
CHD1-212ENST00000614616 RRP36Q96EU6 259 aaKnown RBP15.28■□□□□ 0.04
CHD1-212ENST00000614616 ANGPTL2Q9UKU9 493 aa15.28■□□□□ 0.04
CHD1-212ENST00000614616 SPECC1L-ADORA2AF8WAN1 911 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 DEUP1Q05D60 604 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 INF2Q27J81 1249 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 NME8Q8N427 588 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 PALMDQ9NP74 551 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 SPTLC3Q9NUV7 552 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 BRD1O95696 1058 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 TMCO4Q5TGY1 634 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 POLR2DO15514 142 aaKnown RBP15.27■□□□□ 0.04
CHD1-212ENST00000614616 ZFXP17010 805 aaPredicted RBP15.27■□□□□ 0.04
CHD1-212ENST00000614616 VPS16Q9H269 839 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 BATF3Q9NR55 127 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 CDC23Q9UJX2 597 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 PIK3C2GO75747 1445 aa15.27■□□□□ 0.04
CHD1-212ENST00000614616 RNASELQ05823 741 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms