RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 PCDHB15Q9Y5E8 787 aa23.39■■□□□ 1.33
SRSF4-206ENST00000605204 MANSC4A6NHS7 340 aaPredicted RBP23.38■■□□□ 1.33
SRSF4-206ENST00000605204 IDH1O75874 414 aaKnown RBP23.38■■□□□ 1.33
SRSF4-206ENST00000605204 PPP4CP60510 307 aa23.38■■□□□ 1.33
SRSF4-206ENST00000605204 GPATCH3Q96I76 525 aa23.38■■□□□ 1.33
SRSF4-206ENST00000605204 PIH1D3Q9NQM4 214 aaKnown RBP23.38■■□□□ 1.33
SRSF4-206ENST00000605204 OTOFQ9HC10 1997 aa23.38■■□□□ 1.33
SRSF4-206ENST00000605204 MYH2Q9UKX2 1941 aa23.38■■□□□ 1.33
SRSF4-206ENST00000605204 ATP5JP18859 108 aa23.37■■□□□ 1.33
SRSF4-206ENST00000605204 MKRN3Q13064 507 aaKnown RBP23.37■■□□□ 1.33
SRSF4-206ENST00000605204 WNK4Q96J92 1243 aa23.37■■□□□ 1.33
SRSF4-206ENST00000605204 FZD1Q9UP38 647 aa23.37■■□□□ 1.33
SRSF4-206ENST00000605204 ATRNL1Q5VV63 1379 aa23.36■■□□□ 1.33
SRSF4-206ENST00000605204 CTU1Q7Z7A3 348 aaKnown RBP23.36■■□□□ 1.33
SRSF4-206ENST00000605204 CLMNQ96JQ2 1002 aa23.36■■□□□ 1.33
SRSF4-206ENST00000605204 WRNIP1Q96S55 665 aa23.36■■□□□ 1.33
SRSF4-206ENST00000605204 TM4SF4P48230 202 aa23.35■■□□□ 1.33
SRSF4-206ENST00000605204 VGLL4Q14135 290 aa23.35■■□□□ 1.33
SRSF4-206ENST00000605204 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.35■■□□□ 1.33
SRSF4-206ENST00000605204 ZSCAN29Q8IWY8 852 aaPredicted RBP23.35■■□□□ 1.33
SRSF4-206ENST00000605204 HDAC1Q13547 482 aaPredicted RBP23.34■■□□□ 1.33
SRSF4-206ENST00000605204 TEX11Q8IYF3 940 aa23.34■■□□□ 1.33
SRSF4-206ENST00000605204 ALDH1A1P00352 501 aa23.33■■□□□ 1.33
SRSF4-206ENST00000605204 CYP7A1P22680 504 aa23.33■■□□□ 1.33
SRSF4-206ENST00000605204 PICALMQ13492 652 aa23.33■■□□□ 1.33
SRSF4-206ENST00000605204 HAUS7Q99871 368 aa23.33■■□□□ 1.33
SRSF4-206ENST00000605204 ECHDC1Q9NTX5 307 aa23.33■■□□□ 1.33
SRSF4-206ENST00000605204 AATFQ9NY61 560 aaKnown RBP eCLIP23.33■■□□□ 1.33
SRSF4-206ENST00000605204 ZNF112Q9UJU3 913 aa23.33■■□□□ 1.33
SRSF4-206ENST00000605204 SPDYE5A6NIY4 337 aa23.32■■□□□ 1.32
SRSF4-206ENST00000605204 TBC1D8O95759 1140 aa23.32■■□□□ 1.32
SRSF4-206ENST00000605204 MAGEB6Q8N7X4 407 aa23.32■■□□□ 1.32
SRSF4-206ENST00000605204 ZNF296Q8WUU4 475 aaPredicted RBP23.32■■□□□ 1.32
SRSF4-206ENST00000605204 GCC1Q96CN9 775 aa23.32■■□□□ 1.32
SRSF4-206ENST00000605204 OPTNQ96CV9 577 aa23.32■■□□□ 1.32
SRSF4-206ENST00000605204 DNAJC2Q99543 621 aaKnown RBP23.32■■□□□ 1.32
SRSF4-206ENST00000605204 OSBPL5Q9H0X9 879 aaPredicted RBP23.32■■□□□ 1.32
SRSF4-206ENST00000605204 DHX36Q9H2U1 1008 aaKnown RBP23.32■■□□□ 1.32
SRSF4-206ENST00000605204 ANTXR1Q9H6X2 564 aa23.32■■□□□ 1.32
SRSF4-206ENST00000605204 ELP3Q9H9T3 547 aa23.32■■□□□ 1.32
SRSF4-206ENST00000605204 DDX4Q9NQI0 724 aaKnown RBP23.32■■□□□ 1.32
SRSF4-206ENST00000605204 ZBTB47Q9UFB7 747 aaPredicted RBP23.32■■□□□ 1.32
SRSF4-206ENST00000605204 GOLIM4O00461 696 aa23.31■■□□□ 1.32
SRSF4-206ENST00000605204 MAP3K10Q02779 954 aa23.31■■□□□ 1.32
SRSF4-206ENST00000605204 ERO1BQ86YB8 467 aa23.31■■□□□ 1.32
SRSF4-206ENST00000605204 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.31■■□□□ 1.32
SRSF4-206ENST00000605204 PAG1Q9NWQ8 432 aa23.31■■□□□ 1.32
SRSF4-206ENST00000605204 TBC1D12O60347 775 aa23.3■■□□□ 1.32
SRSF4-206ENST00000605204 NOL9Q5SY16 702 aaKnown RBP23.3■■□□□ 1.32
SRSF4-206ENST00000605204 MIGA2Q7L4E1 593 aa23.3■■□□□ 1.32
SRSF4-206ENST00000605204 ZFPM1Q8IX07 1006 aa23.3■■□□□ 1.32
SRSF4-206ENST00000605204 SH3RF3Q8TEJ3 882 aaPredicted RBP23.3■■□□□ 1.32
SRSF4-206ENST00000605204 BCL11AQ9H165 835 aa23.3■■□□□ 1.32
SRSF4-206ENST00000605204 HPS5Q9UPZ3 1129 aa23.3■■□□□ 1.32
SRSF4-206ENST00000605204 SNCAIPQ9Y6H5 919 aa23.3■■□□□ 1.32
SRSF4-206ENST00000605204 SMARCA5O60264 1052 aaPredicted RBP23.29■■□□□ 1.32
SRSF4-206ENST00000605204 OTUD7BQ6GQQ9 843 aa23.29■■□□□ 1.32
SRSF4-206ENST00000605204 ADGRA1Q86SQ6 560 aa23.29■■□□□ 1.32
SRSF4-206ENST00000605204 CFHR5Q9BXR6 569 aa23.29■■□□□ 1.32
SRSF4-206ENST00000605204 BOLA2Q9H3K6 86 aa23.29■■□□□ 1.32
SRSF4-206ENST00000605204 R3HDMLQ9H3Y0 253 aa23.29■■□□□ 1.32
SRSF4-206ENST00000605204 NDUFB9Q9Y6M9 179 aa23.29■■□□□ 1.32
SRSF4-206ENST00000605204 CENPFP49454 3210 aa23.29■■□□□ 1.32
SRSF4-206ENST00000605204 DDTLA6NHG4 134 aaPredicted RBP23.28■■□□□ 1.32
SRSF4-206ENST00000605204 GTF2A2P52657 109 aa23.28■■□□□ 1.32
SRSF4-206ENST00000605204 SLC9C2Q5TAH2 1124 aa23.28■■□□□ 1.32
SRSF4-206ENST00000605204 SH3BP5LQ7L8J4 393 aa23.28■■□□□ 1.32
SRSF4-206ENST00000605204 HERC5Q9UII4 1024 aaKnown RBP23.28■■□□□ 1.32
SRSF4-206ENST00000605204 DOCK2Q92608 1830 aa23.28■■□□□ 1.32
SRSF4-206ENST00000605204 TTC41PQ6P2S7 1318 aa23.28■■□□□ 1.32
SRSF4-206ENST00000605204 TESPA1A2RU30 521 aaPredicted RBP23.27■■□□□ 1.32
SRSF4-206ENST00000605204 PDE6AP16499 860 aa23.27■■□□□ 1.32
SRSF4-206ENST00000605204 PPATQ06203 517 aa23.27■■□□□ 1.32
SRSF4-206ENST00000605204 PPIL2Q13356 520 aa23.27■■□□□ 1.32
SRSF4-206ENST00000605204 NOM1Q5C9Z4 860 aaKnown RBP23.27■■□□□ 1.32
SRSF4-206ENST00000605204 ZSCAN25Q6NSZ9 544 aa23.27■■□□□ 1.32
SRSF4-206ENST00000605204 FLT1P17948 1338 aa23.27■■□□□ 1.32
SRSF4-206ENST00000605204 MKI67P46013 3256 aaKnown RBP23.27■■□□□ 1.32
SRSF4-206ENST00000605204 GJA5P36382 358 aa23.27■■□□□ 1.31
SRSF4-206ENST00000605204 ZKSCAN4Q969J2 545 aaPredicted RBP23.27■■□□□ 1.31
SRSF4-206ENST00000605204 OTUD5Q96G74 571 aa23.27■■□□□ 1.31
SRSF4-206ENST00000605204 PI4KBQ9UBF8 816 aa23.27■■□□□ 1.31
SRSF4-206ENST00000605204 SUPT16HQ9Y5B9 1047 aaKnown RBP23.27■■□□□ 1.31
SRSF4-206ENST00000605204 ERC2O15083 957 aa23.26■■□□□ 1.31
SRSF4-206ENST00000605204 INPP5BP32019 993 aa23.26■■□□□ 1.31
SRSF4-206ENST00000605204 IFNL1Q8IU54 200 aa23.26■■□□□ 1.31
SRSF4-206ENST00000605204 TGFBRAP1Q8WUH2 860 aa23.26■■□□□ 1.31
SRSF4-206ENST00000605204 RWDD1Q9H446 243 aaPredicted RBP23.26■■□□□ 1.31
SRSF4-206ENST00000605204 PICK1Q9NRD5 415 aa23.26■■□□□ 1.31
SRSF4-206ENST00000605204 BRCA2P51587 3418 aa23.25■■□□□ 1.31
SRSF4-206ENST00000605204 PHF20L1A8MW92 1017 aa23.25■■□□□ 1.31
SRSF4-206ENST00000605204 GPR25O00155 361 aa23.25■■□□□ 1.31
SRSF4-206ENST00000605204 CTNND1O60716 968 aaKnown RBP23.25■■□□□ 1.31
SRSF4-206ENST00000605204 SNAPC2Q13487 334 aa23.25■■□□□ 1.31
SRSF4-206ENST00000605204 SCYL3Q8IZE3 742 aa23.25■■□□□ 1.31
SRSF4-206ENST00000605204 MIGA1Q8NAN2 632 aa23.25■■□□□ 1.31
SRSF4-206ENST00000605204 ZCCHC17Q9NP64 241 aaKnown RBP23.25■■□□□ 1.31
SRSF4-206ENST00000605204 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.25■■□□□ 1.31
SRSF4-206ENST00000605204 MAGEB6P1A0A0J9YX57 407 aa23.24■■□□□ 1.31
SRSF4-206ENST00000605204 HLA-DOAP06340 250 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms