RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 SH3RF3Q8TEJ3 882 aaPredicted RBP17.56■□□□□ 0.4
TUBE1-208ENST00000604743 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
TUBE1-208ENST00000604743 OPTNQ96CV9 577 aa17.56■□□□□ 0.4
TUBE1-208ENST00000604743 DCTPP1Q9H773 170 aa17.56■□□□□ 0.4
TUBE1-208ENST00000604743 CDK5RAP2Q96SN8 1893 aa17.56■□□□□ 0.4
TUBE1-208ENST00000604743 DDTLA6NHG4 134 aaPredicted RBP17.55■□□□□ 0.4
TUBE1-208ENST00000604743 BAG3O95817 575 aa17.55■□□□□ 0.4
TUBE1-208ENST00000604743 ZBTB48P10074 688 aaPredicted RBP17.55■□□□□ 0.4
TUBE1-208ENST00000604743 GJA5P36382 358 aa17.55■□□□□ 0.4
TUBE1-208ENST00000604743 SH3BP5LQ7L8J4 393 aa17.55■□□□□ 0.4
TUBE1-208ENST00000604743 TNS4Q8IZW8 715 aa17.55■□□□□ 0.4
TUBE1-208ENST00000604743 MAGEB6Q8N7X4 407 aa17.55■□□□□ 0.4
TUBE1-208ENST00000604743 BOLA2Q9H3K6 86 aa17.55■□□□□ 0.4
TUBE1-208ENST00000604743 RFX7Q2KHR2 1363 aa17.54■□□□□ 0.4
TUBE1-208ENST00000604743 MANSC4A6NHS7 340 aaPredicted RBP17.54■□□□□ 0.4
TUBE1-208ENST00000604743 GOLIM4O00461 696 aa17.54■□□□□ 0.4
TUBE1-208ENST00000604743 INPP5BP32019 993 aa17.54■□□□□ 0.4
TUBE1-208ENST00000604743 TM4SF4P48230 202 aa17.54■□□□□ 0.4
TUBE1-208ENST00000604743 MAP3K12Q12852 859 aa17.54■□□□□ 0.4
TUBE1-208ENST00000604743 OTUD5Q96G74 571 aa17.54■□□□□ 0.4
TUBE1-208ENST00000604743 SAGE1Q9NXZ1 904 aa17.54■□□□□ 0.4
TUBE1-208ENST00000604743 SLURP2P0DP57 97 aa17.53■□□□□ 0.4
TUBE1-208ENST00000604743 DYNLL1P63167 89 aaKnown RBP17.53■□□□□ 0.4
TUBE1-208ENST00000604743 TTF1Q15361 905 aaPredicted RBP17.53■□□□□ 0.4
TUBE1-208ENST00000604743 MIGA1Q8NAN2 632 aa17.53■□□□□ 0.4
TUBE1-208ENST00000604743 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.53■□□□□ 0.4
TUBE1-208ENST00000604743 EDC3Q96F86 508 aaKnown RBP17.53■□□□□ 0.4
TUBE1-208ENST00000604743 SUPT16HQ9Y5B9 1047 aaKnown RBP17.53■□□□□ 0.4
TUBE1-208ENST00000604743 SNCAIPQ9Y6H5 919 aa17.53■□□□□ 0.4
TUBE1-208ENST00000604743 TBC1D8O95759 1140 aa17.52■□□□□ 0.4
TUBE1-208ENST00000604743 MAP4K4O95819 1239 aaPredicted RBP17.52■□□□□ 0.4
TUBE1-208ENST00000604743 PLCG2P16885 1265 aa17.52■□□□□ 0.4
TUBE1-208ENST00000604743 TGFBRAP1Q8WUH2 860 aa17.52■□□□□ 0.4
TUBE1-208ENST00000604743 FOCADQ5VW36 1801 aa17.51■□□□□ 0.39
TUBE1-208ENST00000604743 ATP5JP18859 108 aa17.51■□□□□ 0.39
TUBE1-208ENST00000604743 PPP4CP60510 307 aa17.51■□□□□ 0.39
TUBE1-208ENST00000604743 MAPKAPK5Q8IW41 473 aa17.51■□□□□ 0.39
TUBE1-208ENST00000604743 OSBPL5Q9H0X9 879 aaPredicted RBP17.51■□□□□ 0.39
TUBE1-208ENST00000604743 MYH1P12882 1939 aa17.51■□□□□ 0.39
TUBE1-208ENST00000604743 LAMB1P07942 1786 aa17.51■□□□□ 0.39
TUBE1-208ENST00000604743 FAM196BA6NMK8 535 aa17.5■□□□□ 0.39
TUBE1-208ENST00000604743 IGSF3O75054 1194 aa17.5■□□□□ 0.39
TUBE1-208ENST00000604743 INHBEP58166 350 aa17.5■□□□□ 0.39
TUBE1-208ENST00000604743 SLC9C2Q5TAH2 1124 aa17.5■□□□□ 0.39
TUBE1-208ENST00000604743 ERO1BQ86YB8 467 aa17.5■□□□□ 0.39
TUBE1-208ENST00000604743 IFNL1Q8IU54 200 aa17.5■□□□□ 0.39
TUBE1-208ENST00000604743 PAG1Q9NWQ8 432 aa17.5■□□□□ 0.39
TUBE1-208ENST00000604743 ZNF112Q9UJU3 913 aa17.5■□□□□ 0.39
TUBE1-208ENST00000604743 MYH7P12883 1935 aa17.5■□□□□ 0.39
TUBE1-208ENST00000604743 SPDYE5A6NIY4 337 aa17.49■□□□□ 0.39
TUBE1-208ENST00000604743 IGF2BP3O00425 579 aaKnown RBP eCLIP17.49■□□□□ 0.39
TUBE1-208ENST00000604743 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
TUBE1-208ENST00000604743 TSHZ3Q63HK5 1081 aa17.49■□□□□ 0.39
TUBE1-208ENST00000604743 EXOC6Q8TAG9 804 aa17.49■□□□□ 0.39
TUBE1-208ENST00000604743 HAUS7Q99871 368 aa17.49■□□□□ 0.39
TUBE1-208ENST00000604743 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.49■□□□□ 0.39
TUBE1-208ENST00000604743 ATRNL1Q5VV63 1379 aa17.49■□□□□ 0.39
TUBE1-208ENST00000604743 CCL15-CCL14A0A0B4J2E2 113 aa17.48■□□□□ 0.39
TUBE1-208ENST00000604743 PDE6AP16499 860 aa17.48■□□□□ 0.39
TUBE1-208ENST00000604743 USP5P45974 858 aa17.48■□□□□ 0.39
TUBE1-208ENST00000604743 GTF2A2P52657 109 aa17.48■□□□□ 0.39
TUBE1-208ENST00000604743 CCL15Q16663 113 aa17.48■□□□□ 0.39
TUBE1-208ENST00000604743 SLC4A8Q2Y0W8 1093 aa17.48■□□□□ 0.39
TUBE1-208ENST00000604743 GPATCH3Q96I76 525 aa17.48■□□□□ 0.39
TUBE1-208ENST00000604743 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
TUBE1-208ENST00000604743 ZBTB47Q9UFB7 747 aaPredicted RBP17.48■□□□□ 0.39
TUBE1-208ENST00000604743 SAP30BPQ9UHR5 308 aaKnown RBP17.48■□□□□ 0.39
TUBE1-208ENST00000604743 FLT1P17948 1338 aa17.47■□□□□ 0.39
TUBE1-208ENST00000604743 ZNF532Q9HCE3 1301 aa17.47■□□□□ 0.39
TUBE1-208ENST00000604743 MAGEB6P1A0A0J9YX57 407 aa17.47■□□□□ 0.39
TUBE1-208ENST00000604743 PHF20L1A8MW92 1017 aa17.47■□□□□ 0.39
TUBE1-208ENST00000604743 IRF6O14896 467 aa17.47■□□□□ 0.39
TUBE1-208ENST00000604743 ALDH1A1P00352 501 aa17.47■□□□□ 0.39
TUBE1-208ENST00000604743 OTUD7BQ6GQQ9 843 aa17.47■□□□□ 0.39
TUBE1-208ENST00000604743 MS4A4AQ96JQ5 239 aa17.47■□□□□ 0.39
TUBE1-208ENST00000604743 PTPN18Q99952 460 aa17.47■□□□□ 0.39
TUBE1-208ENST00000604743 R3HDMLQ9H3Y0 253 aa17.47■□□□□ 0.39
TUBE1-208ENST00000604743 DOCK1Q14185 1865 aa17.47■□□□□ 0.39
TUBE1-208ENST00000604743 CAPN15O75808 1086 aa17.46■□□□□ 0.39
TUBE1-208ENST00000604743 PPATQ06203 517 aa17.46■□□□□ 0.39
TUBE1-208ENST00000604743 PPIL2Q13356 520 aa17.46■□□□□ 0.39
TUBE1-208ENST00000604743 SLFNL1Q499Z3 407 aa17.46■□□□□ 0.39
TUBE1-208ENST00000604743 NOL9Q5SY16 702 aaKnown RBP17.46■□□□□ 0.39
TUBE1-208ENST00000604743 ANKRD45Q5TZF3 282 aa17.46■□□□□ 0.39
TUBE1-208ENST00000604743 SCYL3Q8IZE3 742 aa17.46■□□□□ 0.39
TUBE1-208ENST00000604743 BRI3BPQ8WY22 251 aa17.46■□□□□ 0.39
TUBE1-208ENST00000604743 PICK1Q9NRD5 415 aa17.46■□□□□ 0.39
TUBE1-208ENST00000604743 PALD1Q9ULE6 856 aa17.46■□□□□ 0.39
TUBE1-208ENST00000604743 SIPA1L1O43166 1804 aa17.46■□□□□ 0.39
TUBE1-208ENST00000604743 ATAD5Q96QE3 1844 aa17.46■□□□□ 0.39
TUBE1-208ENST00000604743 COL2A1P02458 1487 aaPredicted RBP17.45■□□□□ 0.38
TUBE1-208ENST00000604743 TESPA1A2RU30 521 aaPredicted RBP17.45■□□□□ 0.38
TUBE1-208ENST00000604743 IRX6P78412 446 aaPredicted RBP17.45■□□□□ 0.38
TUBE1-208ENST00000604743 MAP3K10Q02779 954 aa17.45■□□□□ 0.38
TUBE1-208ENST00000604743 SNAPC2Q13487 334 aa17.45■□□□□ 0.38
TUBE1-208ENST00000604743 IFFO2Q5TF58 517 aa17.45■□□□□ 0.38
TUBE1-208ENST00000604743 TMED8Q6PL24 325 aaPredicted RBP17.45■□□□□ 0.38
TUBE1-208ENST00000604743 CERS3Q8IU89 383 aa17.45■□□□□ 0.38
TUBE1-208ENST00000604743 OTUD7AQ8TE49 926 aaPredicted RBP17.45■□□□□ 0.38
TUBE1-208ENST00000604743 TRIM34Q9BYJ4 488 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms