RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	DEFB129	Q9H1M3	183 aa		13.62	□□□□□ -0.23
CIRBP-236	ENST00000592051	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-236	ENST00000592051	SLC4A4	Q9Y6R1	1079 aa		13.62	□□□□□ -0.23
CIRBP-236	ENST00000592051	MYH2	Q9UKX2	1941 aa		13.62	□□□□□ -0.23
CIRBP-236	ENST00000592051	FLT1	P17948	1338 aa		13.62	□□□□□ -0.23
CIRBP-236	ENST00000592051	CCDC171	Q6TFL3	1326 aa		13.62	□□□□□ -0.23
CIRBP-236	ENST00000592051	DDTL	A6NHG4	134 aa	Predicted RBP	13.61	□□□□□ -0.23
CIRBP-236	ENST00000592051	KRT26	Q7Z3Y9	468 aa		13.61	□□□□□ -0.23
CIRBP-236	ENST00000592051	FAM83A	Q86UY5	434 aa		13.61	□□□□□ -0.23
CIRBP-236	ENST00000592051	CERS3	Q8IU89	383 aa		13.61	□□□□□ -0.23
CIRBP-236	ENST00000592051	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-236	ENST00000592051	DCPS	Q96C86	337 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-236	ENST00000592051	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.61	□□□□□ -0.23
CIRBP-236	ENST00000592051	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.6	□□□□□ -0.23
CIRBP-236	ENST00000592051	PATL2	C9JE40	543 aa	Known RBP	13.6	□□□□□ -0.23
CIRBP-236	ENST00000592051	CYP2D6	P10635	497 aa		13.6	□□□□□ -0.23
CIRBP-236	ENST00000592051	HSPD1	P10809	573 aa	Known RBP	13.6	□□□□□ -0.23
CIRBP-236	ENST00000592051	PTH1R	Q03431	593 aa		13.6	□□□□□ -0.23
CIRBP-236	ENST00000592051	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.6	□□□□□ -0.23
CIRBP-236	ENST00000592051	CDC37L1	Q7L3B6	337 aa		13.6	□□□□□ -0.23
CIRBP-236	ENST00000592051	TMOD2	Q9NZR1	351 aa		13.6	□□□□□ -0.23
CIRBP-236	ENST00000592051	SAP30BP	Q9UHR5	308 aa	Known RBP	13.6	□□□□□ -0.23
CIRBP-236	ENST00000592051	RAD50	Q92878	1312 aa		13.6	□□□□□ -0.23
CIRBP-236	ENST00000592051	ATRNL1	Q5VV63	1379 aa		13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	SSC5D	A1L4H1	1573 aa		13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	CYP2D7	A0A087X1C5	515 aa		13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	USP5	P45974	858 aa		13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	CTR9	Q6PD62	1173 aa		13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	SULF1	Q8IWU6	871 aa		13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	IFNL3	Q8IZI9	196 aa		13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	RBM46	Q8TBY0	533 aa	Known RBP	13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	CDCA5	Q96FF9	252 aa		13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	LSG1	Q9H089	658 aa	Known RBP	13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	ATP8A2	Q9NTI2	1148 aa		13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	PALD1	Q9ULE6	856 aa		13.59	□□□□□ -0.23
CIRBP-236	ENST00000592051	TOMM70	O94826	608 aa		13.58	□□□□□ -0.24
CIRBP-236	ENST00000592051	GNAT2	P19087	354 aa		13.58	□□□□□ -0.24
CIRBP-236	ENST00000592051	PLCD1	P51178	756 aa		13.58	□□□□□ -0.24
CIRBP-236	ENST00000592051	ALX1	Q15699	326 aa		13.58	□□□□□ -0.24
CIRBP-236	ENST00000592051	C8orf34	Q49A92	452 aa		13.58	□□□□□ -0.24
CIRBP-236	ENST00000592051	GIMAP6	Q6P9H5	292 aa		13.58	□□□□□ -0.24
CIRBP-236	ENST00000592051	RUFY2	Q8WXA3	655 aa		13.58	□□□□□ -0.24
CIRBP-236	ENST00000592051	TACC3	Q9Y6A5	838 aa		13.58	□□□□□ -0.24
CIRBP-236	ENST00000592051	MYH7	P12883	1935 aa		13.58	□□□□□ -0.24
CIRBP-236	ENST00000592051	COL2A1	P02458	1487 aa	Predicted RBP	13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	USP17L12	C9JPN9	530 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	USP17L21	D6R901	530 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	SEC24B	O95487	1268 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	FGA	P02671	866 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	TNNI2	P48788	182 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	TNFAIP1	Q13829	316 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	SLC4A8	Q2Y0W8	1093 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	C12orf60	Q5U649	245 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	MCM9	Q9NXL9	1143 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	FZD1	Q9UP38	647 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	PPP2R3B	Q9Y5P8	575 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	PASK	Q96RG2	1323 aa		13.57	□□□□□ -0.24
CIRBP-236	ENST00000592051	APP	P05067	770 aa		13.56	□□□□□ -0.24
CIRBP-236	ENST00000592051	MAP3K10	Q02779	954 aa		13.56	□□□□□ -0.24
CIRBP-236	ENST00000592051	SBK1	Q52WX2	424 aa		13.56	□□□□□ -0.24
CIRBP-236	ENST00000592051	CST9	Q5W186	159 aa		13.56	□□□□□ -0.24
CIRBP-236	ENST00000592051	METTL16	Q86W50	562 aa	Known RBP	13.56	□□□□□ -0.24
CIRBP-236	ENST00000592051	SMC1B	Q8NDV3	1235 aa		13.56	□□□□□ -0.24
CIRBP-236	ENST00000592051	MAP4K1	Q92918	833 aa		13.56	□□□□□ -0.24
CIRBP-236	ENST00000592051	DSCC1	Q9BVC3	393 aa		13.56	□□□□□ -0.24
CIRBP-236	ENST00000592051	NBPF3	Q9H094	633 aa		13.56	□□□□□ -0.24
CIRBP-236	ENST00000592051	DNAJC18	Q9H819	358 aa		13.56	□□□□□ -0.24
CIRBP-236	ENST00000592051	FAM196B	A6NMK8	535 aa		13.55	□□□□□ -0.24
CIRBP-236	ENST00000592051	MFAP1	P55081	439 aa	Known RBP	13.55	□□□□□ -0.24
CIRBP-236	ENST00000592051	GABPA	Q06546	454 aa		13.55	□□□□□ -0.24
CIRBP-236	ENST00000592051	RRP1B	Q14684	758 aa	Known RBP	13.55	□□□□□ -0.24
CIRBP-236	ENST00000592051	MOB2	Q70IA6	237 aa		13.55	□□□□□ -0.24
CIRBP-236	ENST00000592051	DYNLL2	Q96FJ2	89 aa		13.55	□□□□□ -0.24
CIRBP-236	ENST00000592051	CSRNP1	Q96S65	589 aa		13.55	□□□□□ -0.24
CIRBP-236	ENST00000592051	TAF6L	Q9Y6J9	622 aa		13.55	□□□□□ -0.24
CIRBP-236	ENST00000592051	DDX60L	Q5H9U9	1706 aa	Known RBP	13.55	□□□□□ -0.24
CIRBP-236	ENST00000592051	TDO2	P48775	406 aa		13.54	□□□□□ -0.24
CIRBP-236	ENST00000592051	FSTL1	Q12841	308 aa		13.54	□□□□□ -0.24
CIRBP-236	ENST00000592051	MIGA2	Q7L4E1	593 aa		13.54	□□□□□ -0.24
CIRBP-236	ENST00000592051	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.54	□□□□□ -0.24
CIRBP-236	ENST00000592051	SLC44A5	Q8NCS7	719 aa		13.54	□□□□□ -0.24
CIRBP-236	ENST00000592051	NKX2-3	Q8TAU0	364 aa		13.54	□□□□□ -0.24
CIRBP-236	ENST00000592051	DHX36	Q9H2U1	1008 aa	Known RBP	13.54	□□□□□ -0.24
CIRBP-236	ENST00000592051	ANO2	Q9NQ90	1003 aa		13.54	□□□□□ -0.24
CIRBP-236	ENST00000592051	ZMYM6	O95789	1325 aa		13.54	□□□□□ -0.24
CIRBP-236	ENST00000592051	ECM29	Q5VYK3	1845 aa		13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	PHF20L1	A8MW92	1017 aa		13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	USP2	O75604	605 aa	Predicted RBP	13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	POLR3D	P05423	398 aa	Predicted RBP	13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	JAG1	P78504	1218 aa		13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	SUPT20HL1	Q3ZLR7	823 aa		13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	CASC1	Q6TDU7	716 aa		13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	TTC6	Q86TZ1	520 aa		13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	NACAP1	Q9BZK3	213 aa		13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	NAPB	Q9H115	298 aa		13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	EHD4	Q9H223	541 aa		13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	INCENP	Q9NQS7	918 aa		13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	PI4KB	Q9UBF8	816 aa		13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.53	□□□□□ -0.24
CIRBP-236	ENST00000592051	ANAPC4	Q9UJX5	808 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms