RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	ZNF112	Q9UJU3	913 aa		21.11	■□□□□ 0.97
MBD1-221	ENST00000589867	SIPA1L1	O43166	1804 aa		21.11	■□□□□ 0.97
MBD1-221	ENST00000589867	CYP7A1	P22680	504 aa		21.1	■□□□□ 0.97
MBD1-221	ENST00000589867	DYNLL1	P63167	89 aa	Known RBP	21.1	■□□□□ 0.97
MBD1-221	ENST00000589867	PICALM	Q13492	652 aa		21.1	■□□□□ 0.97
MBD1-221	ENST00000589867	RNF186	Q9NXI6	227 aa		21.1	■□□□□ 0.97
MBD1-221	ENST00000589867	SNCAIP	Q9Y6H5	919 aa		21.1	■□□□□ 0.97
MBD1-221	ENST00000589867	GOLIM4	O00461	696 aa		21.09	■□□□□ 0.97
MBD1-221	ENST00000589867	MAP4K4	O95819	1239 aa	Predicted RBP	21.09	■□□□□ 0.97
MBD1-221	ENST00000589867	INPP5B	P32019	993 aa		21.09	■□□□□ 0.97
MBD1-221	ENST00000589867	TM4SF4	P48230	202 aa		21.09	■□□□□ 0.97
MBD1-221	ENST00000589867	HDAC1	Q13547	482 aa	Predicted RBP	21.09	■□□□□ 0.97
MBD1-221	ENST00000589867	MAGEB6	Q8N7X4	407 aa		21.09	■□□□□ 0.97
MBD1-221	ENST00000589867	OTUD7A	Q8TE49	926 aa	Predicted RBP	21.09	■□□□□ 0.97
MBD1-221	ENST00000589867	ZKSCAN4	Q969J2	545 aa	Predicted RBP	21.09	■□□□□ 0.97
MBD1-221	ENST00000589867	HAUS7	Q99871	368 aa		21.09	■□□□□ 0.97
MBD1-221	ENST00000589867	ELP3	Q9H9T3	547 aa		21.09	■□□□□ 0.97
MBD1-221	ENST00000589867	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	21.09	■□□□□ 0.97
MBD1-221	ENST00000589867	CASP8AP2	Q9UKL3	1982 aa		21.08	■□□□□ 0.97
MBD1-221	ENST00000589867	COL2A1	P02458	1487 aa	Predicted RBP	21.08	■□□□□ 0.97
MBD1-221	ENST00000589867	TCRBV5S4A2T	A0A5A2	114 aa		21.08	■□□□□ 0.97
MBD1-221	ENST00000589867	PHF20L1	A8MW92	1017 aa		21.08	■□□□□ 0.97
MBD1-221	ENST00000589867	CHGB	P05060	677 aa		21.08	■□□□□ 0.97
MBD1-221	ENST00000589867	SLFNL1	Q499Z3	407 aa		21.08	■□□□□ 0.97
MBD1-221	ENST00000589867	TEX11	Q8IYF3	940 aa		21.08	■□□□□ 0.97
MBD1-221	ENST00000589867	WRNIP1	Q96S55	665 aa		21.08	■□□□□ 0.97
MBD1-221	ENST00000589867	DNAJC2	Q99543	621 aa	Known RBP	21.08	■□□□□ 0.97
MBD1-221	ENST00000589867	PRDM10	Q9NQV6	1147 aa		21.08	■□□□□ 0.97
MBD1-221	ENST00000589867	ZBTB48	P10074	688 aa	Predicted RBP	21.07	■□□□□ 0.96
MBD1-221	ENST00000589867	TSHZ3	Q63HK5	1081 aa		21.07	■□□□□ 0.96
MBD1-221	ENST00000589867	OPTN	Q96CV9	577 aa		21.07	■□□□□ 0.96
MBD1-221	ENST00000589867	ZNF341	Q9BYN7	854 aa		21.07	■□□□□ 0.96
MBD1-221	ENST00000589867	OSBPL5	Q9H0X9	879 aa	Predicted RBP	21.07	■□□□□ 0.96
MBD1-221	ENST00000589867	SALL3	Q9BXA9	1300 aa		21.06	■□□□□ 0.96
MBD1-221	ENST00000589867	CA12	O43570	354 aa		21.06	■□□□□ 0.96
MBD1-221	ENST00000589867	PDE6A	P16499	860 aa		21.06	■□□□□ 0.96
MBD1-221	ENST00000589867	MAP3K12	Q12852	859 aa		21.06	■□□□□ 0.96
MBD1-221	ENST00000589867	DCAF15	Q66K64	600 aa		21.06	■□□□□ 0.96
MBD1-221	ENST00000589867	MIGA1	Q8NAN2	632 aa		21.06	■□□□□ 0.96
MBD1-221	ENST00000589867	MS4A4A	Q96JQ5	239 aa		21.06	■□□□□ 0.96
MBD1-221	ENST00000589867	RIOK1	Q9BRS2	568 aa	Known RBP	21.06	■□□□□ 0.96
MBD1-221	ENST00000589867	PAG1	Q9NWQ8	432 aa		21.06	■□□□□ 0.96
MBD1-221	ENST00000589867	TRPA1	O75762	1119 aa		21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	BAG3	O95817	575 aa		21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	AAMP	Q13685	434 aa		21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	TTF1	Q15361	905 aa	Predicted RBP	21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	REM2	Q8IYK8	340 aa	Predicted RBP	21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	TGFBRAP1	Q8WUH2	860 aa		21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	HOOK2	Q96ED9	719 aa		21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	PTPN18	Q99952	460 aa		21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	BEGAIN	Q9BUH8	593 aa		21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	ECHDC1	Q9NTX5	307 aa		21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	SAGE1	Q9NXZ1	904 aa		21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	MYH7	P12883	1935 aa		21.05	■□□□□ 0.96
MBD1-221	ENST00000589867	TESPA1	A2RU30	521 aa	Predicted RBP	21.04	■□□□□ 0.96
MBD1-221	ENST00000589867	SPDYE5	A6NIY4	337 aa		21.04	■□□□□ 0.96
MBD1-221	ENST00000589867	IGF2BP3	O00425	579 aa	Known RBP eCLIP	21.04	■□□□□ 0.96
MBD1-221	ENST00000589867	IGHD	P01880	384 aa		21.04	■□□□□ 0.96
MBD1-221	ENST00000589867	R3HDML	Q9H3Y0	253 aa		21.04	■□□□□ 0.96
MBD1-221	ENST00000589867	FLT1	P17948	1338 aa		21.04	■□□□□ 0.96
MBD1-221	ENST00000589867	MANSC4	A6NHS7	340 aa	Predicted RBP	21.03	■□□□□ 0.96
MBD1-221	ENST00000589867	FAM196B	A6NMK8	535 aa		21.03	■□□□□ 0.96
MBD1-221	ENST00000589867	RRP1B	Q14684	758 aa	Known RBP	21.03	■□□□□ 0.96
MBD1-221	ENST00000589867	NOL9	Q5SY16	702 aa	Known RBP	21.03	■□□□□ 0.96
MBD1-221	ENST00000589867	SLC9C2	Q5TAH2	1124 aa		21.03	■□□□□ 0.96
MBD1-221	ENST00000589867	TMED8	Q6PL24	325 aa	Predicted RBP	21.03	■□□□□ 0.96
MBD1-221	ENST00000589867	MAPKAPK5	Q8IW41	473 aa		21.03	■□□□□ 0.96
MBD1-221	ENST00000589867	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	21.03	■□□□□ 0.96
MBD1-221	ENST00000589867	CSAD	Q9Y600	493 aa		21.03	■□□□□ 0.96
MBD1-221	ENST00000589867	ZNF532	Q9HCE3	1301 aa		21.03	■□□□□ 0.96
MBD1-221	ENST00000589867	DDX60L	Q5H9U9	1706 aa	Known RBP	21.02	■□□□□ 0.96
MBD1-221	ENST00000589867	TBC1D12	O60347	775 aa		21.02	■□□□□ 0.96
MBD1-221	ENST00000589867	PLCG2	P16885	1265 aa		21.02	■□□□□ 0.96
MBD1-221	ENST00000589867	ADD2	P35612	726 aa		21.02	■□□□□ 0.96
MBD1-221	ENST00000589867	PI4K2B	Q8TCG2	481 aa		21.02	■□□□□ 0.96
MBD1-221	ENST00000589867	OTUD5	Q96G74	571 aa		21.02	■□□□□ 0.96
MBD1-221	ENST00000589867	MYH1	P12882	1939 aa		21.02	■□□□□ 0.95
MBD1-221	ENST00000589867	PHIP	Q8WWQ0	1821 aa		21.01	■□□□□ 0.95
MBD1-221	ENST00000589867	METTL16	Q86W50	562 aa	Known RBP	21.01	■□□□□ 0.95
MBD1-221	ENST00000589867	ERO1B	Q86YB8	467 aa		21.01	■□□□□ 0.95
MBD1-221	ENST00000589867	IFNL1	Q8IU54	200 aa		21.01	■□□□□ 0.95
MBD1-221	ENST00000589867	SMC5	Q8IY18	1101 aa		21.01	■□□□□ 0.95
MBD1-221	ENST00000589867	BRI3BP	Q8WY22	251 aa		21.01	■□□□□ 0.95
MBD1-221	ENST00000589867	NOL10	Q9BSC4	688 aa	Known RBP	21.01	■□□□□ 0.95
MBD1-221	ENST00000589867	DNAJC18	Q9H819	358 aa		21.01	■□□□□ 0.95
MBD1-221	ENST00000589867	IRF6	O14896	467 aa		21	■□□□□ 0.95
MBD1-221	ENST00000589867	IRX6	P78412	446 aa	Predicted RBP	21	■□□□□ 0.95
MBD1-221	ENST00000589867	SREBF2	Q12772	1141 aa		21	■□□□□ 0.95
MBD1-221	ENST00000589867	ANKRD45	Q5TZF3	282 aa		21	■□□□□ 0.95
MBD1-221	ENST00000589867	GCC1	Q96CN9	775 aa		21	■□□□□ 0.95
MBD1-221	ENST00000589867	CFHR5	Q9BXR6	569 aa		21	■□□□□ 0.95
MBD1-221	ENST00000589867	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	21	■□□□□ 0.95
MBD1-221	ENST00000589867	PALD1	Q9ULE6	856 aa		21	■□□□□ 0.95
MBD1-221	ENST00000589867	DOCK1	Q14185	1865 aa		21	■□□□□ 0.95
MBD1-221	ENST00000589867	TBC1D8	O95759	1140 aa		20.99	■□□□□ 0.95
MBD1-221	ENST00000589867	INHBE	P58166	350 aa		20.99	■□□□□ 0.95
MBD1-221	ENST00000589867	PPIL2	Q13356	520 aa		20.99	■□□□□ 0.95
MBD1-221	ENST00000589867	LCORL	Q8N3X6	602 aa		20.99	■□□□□ 0.95
MBD1-221	ENST00000589867	MOGS	Q13724	837 aa		20.98	■□□□□ 0.95
MBD1-221	ENST00000589867	SAP30BP	Q9UHR5	308 aa	Known RBP	20.98	■□□□□ 0.95

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