RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ENTPD3O75355 529 aa14.83□□□□□ -0.04
BRCA1-225ENST00000586385 ZEB1P37275 1124 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-225ENST00000586385 RASGRF1Q13972 1273 aa14.83□□□□□ -0.04
BRCA1-225ENST00000586385 ALDH1L2Q3SY69 923 aa14.83□□□□□ -0.04
BRCA1-225ENST00000586385 CCDC102BQ68D86 513 aa14.83□□□□□ -0.04
BRCA1-225ENST00000586385 CCDC84Q86UT8 332 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-225ENST00000586385 UNC93B1Q9H1C4 597 aa14.83□□□□□ -0.04
BRCA1-225ENST00000586385 CEP126Q9P2H0 1117 aa14.83□□□□□ -0.04
BRCA1-225ENST00000586385 DENND2AQ9ULE3 1009 aa14.83□□□□□ -0.04
BRCA1-225ENST00000586385 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-225ENST00000586385 SEMA3EO15041 775 aa14.82□□□□□ -0.04
BRCA1-225ENST00000586385 UBTFL1P0CB47 393 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-225ENST00000586385 HOXD10P28358 340 aa14.82□□□□□ -0.04
BRCA1-225ENST00000586385 TRMT2AQ8IZ69 625 aaKnown RBP14.82□□□□□ -0.04
BRCA1-225ENST00000586385 RNF208Q9H0X6 261 aa14.82□□□□□ -0.04
BRCA1-225ENST00000586385 LRRFIP2Q9Y608 721 aaKnown RBP14.82□□□□□ -0.04
BRCA1-225ENST00000586385 RANBP2P49792 3224 aaKnown RBP14.82□□□□□ -0.04
BRCA1-225ENST00000586385 IL15P40933 162 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-225ENST00000586385 FCGRTP55899 365 aa14.81□□□□□ -0.04
BRCA1-225ENST00000586385 U2AF1L4Q8WU68 220 aaKnown RBP14.81□□□□□ -0.04
BRCA1-225ENST00000586385 DPF3Q92784 378 aa14.81□□□□□ -0.04
BRCA1-225ENST00000586385 FAM163AQ96GL9 167 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-225ENST00000586385 MEIS3Q99687 375 aa14.81□□□□□ -0.04
BRCA1-225ENST00000586385 COPRSQ9NQ92 184 aa14.81□□□□□ -0.04
BRCA1-225ENST00000586385 SMC4Q9NTJ3 1288 aa14.81□□□□□ -0.04
BRCA1-225ENST00000586385 GNL3LQ9NVN8 582 aaKnown RBP14.81□□□□□ -0.04
BRCA1-225ENST00000586385 ELNP15502 786 aa14.8□□□□□ -0.04
BRCA1-225ENST00000586385 FLT3LGP49771 235 aa14.8□□□□□ -0.04
BRCA1-225ENST00000586385 RHBDL3P58872 404 aa14.8□□□□□ -0.04
BRCA1-225ENST00000586385 TIMM10P62072 90 aa14.8□□□□□ -0.04
BRCA1-225ENST00000586385 SLAIN1Q8ND83 568 aa14.8□□□□□ -0.04
BRCA1-225ENST00000586385 NKX2-3Q8TAU0 364 aa14.8□□□□□ -0.04
BRCA1-225ENST00000586385 NOB1Q9ULX3 412 aaKnown RBP14.8□□□□□ -0.04
BRCA1-225ENST00000586385 SLC45A1Q9Y2W3 748 aa14.8□□□□□ -0.04
BRCA1-225ENST00000586385 SZT2Q5T011 3432 aa14.8□□□□□ -0.04
BRCA1-225ENST00000586385 MYH13Q9UKX3 1938 aa14.8□□□□□ -0.04
BRCA1-225ENST00000586385 FAM196BA6NMK8 535 aa14.79□□□□□ -0.04
BRCA1-225ENST00000586385 ADCY3O60266 1144 aa14.79□□□□□ -0.04
BRCA1-225ENST00000586385 BTDP43251 543 aa14.79□□□□□ -0.04
BRCA1-225ENST00000586385 PDS5AQ29RF7 1337 aaKnown RBP14.79□□□□□ -0.04
BRCA1-225ENST00000586385 TREML2Q5T2D2 321 aa14.79□□□□□ -0.04
BRCA1-225ENST00000586385 GADL1Q6ZQY3 521 aa14.79□□□□□ -0.04
BRCA1-225ENST00000586385 FASTKD5Q7L8L6 764 aaKnown RBP14.79□□□□□ -0.04
BRCA1-225ENST00000586385 PICK1Q9NRD5 415 aa14.79□□□□□ -0.04
BRCA1-225ENST00000586385 ZBTB7BO15156 539 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-225ENST00000586385 CTNND1O60716 968 aaKnown RBP14.78□□□□□ -0.04
BRCA1-225ENST00000586385 FARP2O94887 1054 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-225ENST00000586385 SGPL1O95470 568 aa14.78□□□□□ -0.04
BRCA1-225ENST00000586385 INHAP05111 366 aa14.78□□□□□ -0.04
BRCA1-225ENST00000586385 UBXN2AP68543 259 aa14.78□□□□□ -0.04
BRCA1-225ENST00000586385 PICALMQ13492 652 aa14.78□□□□□ -0.04
BRCA1-225ENST00000586385 RRP1BQ14684 758 aaKnown RBP14.78□□□□□ -0.04
BRCA1-225ENST00000586385 ZSCAN29Q8IWY8 852 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-225ENST00000586385 BIN2Q9UBW5 565 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-225ENST00000586385 ABCF2Q9UG63 623 aa14.78□□□□□ -0.04
BRCA1-225ENST00000586385 DOCK2Q92608 1830 aa14.78□□□□□ -0.04
BRCA1-225ENST00000586385 MROH7-TTC4A0A0A0MT08 1334 aa14.77□□□□□ -0.04
BRCA1-225ENST00000586385 GPR75-ASB3A0A0A6YYF3 556 aa14.77□□□□□ -0.05
BRCA1-225ENST00000586385 TRIM75PA6NK02 468 aa14.77□□□□□ -0.05
BRCA1-225ENST00000586385 MECOMQ03112 1051 aa14.77□□□□□ -0.05
BRCA1-225ENST00000586385 TFCP2Q12800 502 aa14.77□□□□□ -0.05
BRCA1-225ENST00000586385 IRF5Q13568 498 aa14.77□□□□□ -0.05
BRCA1-225ENST00000586385 PI16Q6UXB8 463 aa14.77□□□□□ -0.05
BRCA1-225ENST00000586385 DZIP1Q86YF9 867 aaKnown RBP14.77□□□□□ -0.05
BRCA1-225ENST00000586385 PXYLP1Q8TE99 480 aa14.77□□□□□ -0.05
BRCA1-225ENST00000586385 XAGE2Q96GT9 111 aa14.77□□□□□ -0.05
BRCA1-225ENST00000586385 PAK6Q9NQU5 681 aaPredicted RBP14.77□□□□□ -0.05
BRCA1-225ENST00000586385 AGTPBP1Q9UPW5 1226 aa14.77□□□□□ -0.05
BRCA1-225ENST00000586385 PHIPQ8WWQ0 1821 aa14.77□□□□□ -0.05
BRCA1-225ENST00000586385 A0A1B0GUL7 405 aa14.76□□□□□ -0.05
BRCA1-225ENST00000586385 ZGPATQ8N5A5 531 aaKnown RBP14.76□□□□□ -0.05
BRCA1-225ENST00000586385 ANKRD13CQ8N6S4 541 aa14.76□□□□□ -0.05
BRCA1-225ENST00000586385 CRISPLD2Q9H0B8 497 aa14.76□□□□□ -0.05
BRCA1-225ENST00000586385 PTPRFP10586 1907 aa14.76□□□□□ -0.05
BRCA1-225ENST00000586385 MYH2Q9UKX2 1941 aa14.76□□□□□ -0.05
BRCA1-225ENST00000586385 AK9Q5TCS8 1911 aa14.75□□□□□ -0.05
BRCA1-225ENST00000586385 TNPO2O14787 897 aaKnown RBP14.75□□□□□ -0.05
BRCA1-225ENST00000586385 TBC1D12O60347 775 aa14.75□□□□□ -0.05
BRCA1-225ENST00000586385 NPM3O75607 178 aaKnown RBP14.75□□□□□ -0.05
BRCA1-225ENST00000586385 TBC1D9Q6ZT07 1266 aa14.75□□□□□ -0.05
BRCA1-225ENST00000586385 DEFB118Q96PH6 123 aa14.75□□□□□ -0.05
BRCA1-225ENST00000586385 HTATIP2Q9BUP3 242 aa14.75□□□□□ -0.05
BRCA1-225ENST00000586385 HMG20BQ9P0W2 317 aa14.75□□□□□ -0.05
BRCA1-225ENST00000586385 MGAMO43451 1857 aa14.75□□□□□ -0.05
BRCA1-225ENST00000586385 DOCK1Q14185 1865 aa14.74□□□□□ -0.05
BRCA1-225ENST00000586385 SOX1O00570 391 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-225ENST00000586385 MTX1Q13505 466 aa14.74□□□□□ -0.05
BRCA1-225ENST00000586385 FAM110CQ1W6H9 321 aa14.74□□□□□ -0.05
BRCA1-225ENST00000586385 SMCR8Q8TEV9 937 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-225ENST00000586385 DIS3LQ8TF46 1054 aaKnown RBP14.74□□□□□ -0.05
BRCA1-225ENST00000586385 NSUN4Q96CB9 384 aaKnown RBP14.74□□□□□ -0.05
BRCA1-225ENST00000586385 API5Q9BZZ5 524 aaKnown RBP14.74□□□□□ -0.05
BRCA1-225ENST00000586385 MNX1P50219 401 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-225ENST00000586385 JAG1P78504 1218 aa14.73□□□□□ -0.05
BRCA1-225ENST00000586385 SPP2Q13103 211 aa14.73□□□□□ -0.05
BRCA1-225ENST00000586385 SPTY2D1Q68D10 685 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-225ENST00000586385 ERICH6Q7L0X2 663 aa14.73□□□□□ -0.05
BRCA1-225ENST00000586385 GJD2Q9UKL4 321 aa14.73□□□□□ -0.05
BRCA1-225ENST00000586385 TNNQ9UQP3 1299 aa14.73□□□□□ -0.05
BRCA1-225ENST00000586385 COL2A1P02458 1487 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms