RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 SPDYE5A6NIY4 337 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 PLCG2P16885 1265 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 RGS3P49796 1198 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 TCP10Q12799 353 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 NOL9Q5SY16 702 aaKnown RBP12.1□□□□□ -0.47
SKA2-208ENST00000583927 OTUD7BQ6GQQ9 843 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 ERO1BQ86YB8 467 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 IFNL1Q8IU54 200 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 CERS3Q8IU89 383 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 MS4A4AQ96JQ5 239 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 WRNIP1Q96S55 665 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 CCDC8Q9H0W5 538 aaPredicted RBP12.1□□□□□ -0.47
SKA2-208ENST00000583927 ELP3Q9H9T3 547 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 TLR7Q9NYK1 1049 aaKnown RBP12.1□□□□□ -0.47
SKA2-208ENST00000583927 RAI14Q9P0K7 980 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 SNCAIPQ9Y6H5 919 aa12.1□□□□□ -0.47
SKA2-208ENST00000583927 TBC1D12O60347 775 aa12.09□□□□□ -0.47
SKA2-208ENST00000583927 ZAP70P43403 619 aa12.09□□□□□ -0.47
SKA2-208ENST00000583927 GTF2A2P52657 109 aa12.09□□□□□ -0.47
SKA2-208ENST00000583927 PPATQ06203 517 aa12.09□□□□□ -0.47
SKA2-208ENST00000583927 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
SKA2-208ENST00000583927 AACSQ86V21 672 aa12.09□□□□□ -0.47
SKA2-208ENST00000583927 ZFPM1Q8IX07 1006 aa12.09□□□□□ -0.47
SKA2-208ENST00000583927 ZCCHC17Q9NP64 241 aaKnown RBP12.09□□□□□ -0.47
SKA2-208ENST00000583927 DDX4Q9NQI0 724 aaKnown RBP12.09□□□□□ -0.47
SKA2-208ENST00000583927 MYH8P13535 1937 aa12.08□□□□□ -0.48
SKA2-208ENST00000583927 PHF20L1A8MW92 1017 aa12.08□□□□□ -0.48
SKA2-208ENST00000583927 IGF2BP3O00425 579 aaKnown RBP eCLIP12.08□□□□□ -0.48
SKA2-208ENST00000583927 BAG3O95817 575 aa12.08□□□□□ -0.48
SKA2-208ENST00000583927 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
SKA2-208ENST00000583927 PPIL2Q13356 520 aa12.08□□□□□ -0.48
SKA2-208ENST00000583927 SH3BP5LQ7L8J4 393 aa12.08□□□□□ -0.48
SKA2-208ENST00000583927 NOL10Q9BSC4 688 aaKnown RBP12.08□□□□□ -0.48
SKA2-208ENST00000583927 SNRKQ9NRH2 765 aa12.08□□□□□ -0.48
SKA2-208ENST00000583927 DDX60LQ5H9U9 1706 aaKnown RBP12.08□□□□□ -0.48
SKA2-208ENST00000583927 DDTLA6NHG4 134 aaPredicted RBP12.07□□□□□ -0.48
SKA2-208ENST00000583927 GPR25O00155 361 aa12.07□□□□□ -0.48
SKA2-208ENST00000583927 RRP1P56182 461 aaKnown RBP12.07□□□□□ -0.48
SKA2-208ENST00000583927 TTF1Q15361 905 aaPredicted RBP12.07□□□□□ -0.48
SKA2-208ENST00000583927 MIGA2Q7L4E1 593 aa12.07□□□□□ -0.48
SKA2-208ENST00000583927 NAV1Q8NEY1 1877 aa12.07□□□□□ -0.48
SKA2-208ENST00000583927 ZKSCAN4Q969J2 545 aaPredicted RBP12.07□□□□□ -0.48
SKA2-208ENST00000583927 PTPN18Q99952 460 aa12.07□□□□□ -0.48
SKA2-208ENST00000583927 OSBPL5Q9H0X9 879 aaPredicted RBP12.07□□□□□ -0.48
SKA2-208ENST00000583927 DHX36Q9H2U1 1008 aaKnown RBP12.07□□□□□ -0.48
SKA2-208ENST00000583927 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
SKA2-208ENST00000583927 KCNH4Q9UQ05 1017 aa12.07□□□□□ -0.48
SKA2-208ENST00000583927 MGAMO43451 1857 aa12.06□□□□□ -0.48
SKA2-208ENST00000583927 CTNND1O60716 968 aaKnown RBP12.06□□□□□ -0.48
SKA2-208ENST00000583927 TBC1D8O95759 1140 aa12.06□□□□□ -0.48
SKA2-208ENST00000583927 IFIT2P09913 472 aaKnown RBP12.06□□□□□ -0.48
SKA2-208ENST00000583927 INPP5BP32019 993 aa12.06□□□□□ -0.48
SKA2-208ENST00000583927 MAP3K12Q12852 859 aa12.06□□□□□ -0.48
SKA2-208ENST00000583927 SNAPC2Q13487 334 aa12.06□□□□□ -0.48
SKA2-208ENST00000583927 PKN2Q16513 984 aaKnown RBP12.06□□□□□ -0.48
SKA2-208ENST00000583927 METTL16Q86W50 562 aaKnown RBP12.06□□□□□ -0.48
SKA2-208ENST00000583927 TEX11Q8IYF3 940 aa12.06□□□□□ -0.48
SKA2-208ENST00000583927 OTUD5Q96G74 571 aa12.06□□□□□ -0.48
SKA2-208ENST00000583927 ABHD8Q96I13 439 aa12.06□□□□□ -0.48
SKA2-208ENST00000583927 LRRCC1Q9C099 1032 aa12.06□□□□□ -0.48
SKA2-208ENST00000583927 DCTPP1Q9H773 170 aa12.06□□□□□ -0.48
SKA2-208ENST00000583927 PIH1D3Q9NQM4 214 aaKnown RBP12.06□□□□□ -0.48
SKA2-208ENST00000583927 LOC285556D6RIA3 1793 aa12.05□□□□□ -0.48
SKA2-208ENST00000583927 IRF6O14896 467 aa12.05□□□□□ -0.48
SKA2-208ENST00000583927 CETPP11597 493 aa12.05□□□□□ -0.48
SKA2-208ENST00000583927 ATP5JP18859 108 aa12.05□□□□□ -0.48
SKA2-208ENST00000583927 PICALMQ13492 652 aa12.05□□□□□ -0.48
SKA2-208ENST00000583927 AAMPQ13685 434 aa12.05□□□□□ -0.48
SKA2-208ENST00000583927 CTU1Q7Z7A3 348 aaKnown RBP12.05□□□□□ -0.48
SKA2-208ENST00000583927 ADGRA1Q86SQ6 560 aa12.05□□□□□ -0.48
SKA2-208ENST00000583927 ZSCAN29Q8IWY8 852 aaPredicted RBP12.05□□□□□ -0.48
SKA2-208ENST00000583927 ZNF296Q8WUU4 475 aaPredicted RBP12.05□□□□□ -0.48
SKA2-208ENST00000583927 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
SKA2-208ENST00000583927 BRI3BPQ8WY22 251 aa12.05□□□□□ -0.48
SKA2-208ENST00000583927 MCOLN1Q9GZU1 580 aa12.05□□□□□ -0.48
SKA2-208ENST00000583927 AATFQ9NY61 560 aaKnown RBP eCLIP12.05□□□□□ -0.48
SKA2-208ENST00000583927 HERC5Q9UII4 1024 aaKnown RBP12.05□□□□□ -0.48
SKA2-208ENST00000583927 BAZ2AQ9UIF9 1905 aaKnown RBP12.05□□□□□ -0.48
SKA2-208ENST00000583927 BRCA2P51587 3418 aa12.04□□□□□ -0.48
SKA2-208ENST00000583927 CCL15-CCL14A0A0B4J2E2 113 aa12.04□□□□□ -0.48
SKA2-208ENST00000583927 CXCL11O14625 94 aa12.04□□□□□ -0.48
SKA2-208ENST00000583927 FKTNO75072 461 aa12.04□□□□□ -0.48
SKA2-208ENST00000583927 IDH1O75874 414 aaKnown RBP12.04□□□□□ -0.48
SKA2-208ENST00000583927 DGKZQ13574 1117 aa12.04□□□□□ -0.48
SKA2-208ENST00000583927 CCL15Q16663 113 aa12.04□□□□□ -0.48
SKA2-208ENST00000583927 SCYL3Q8IZE3 742 aa12.04□□□□□ -0.48
SKA2-208ENST00000583927 SH3RF3Q8TEJ3 882 aaPredicted RBP12.04□□□□□ -0.48
SKA2-208ENST00000583927 TBC1D2Q9BYX2 928 aa12.04□□□□□ -0.48
SKA2-208ENST00000583927 R3HDMLQ9H3Y0 253 aa12.04□□□□□ -0.48
SKA2-208ENST00000583927 ANTXR1Q9H6X2 564 aa12.04□□□□□ -0.48
SKA2-208ENST00000583927 PI4KBQ9UBF8 816 aa12.04□□□□□ -0.48
SKA2-208ENST00000583927 TNRC18O15417 2968 aaPredicted RBP12.03□□□□□ -0.48
SKA2-208ENST00000583927 PTPRAP18433 802 aa12.03□□□□□ -0.48
SKA2-208ENST00000583927 CYP7A1P22680 504 aa12.03□□□□□ -0.48
SKA2-208ENST00000583927 CRHR2Q13324 411 aa12.03□□□□□ -0.48
SKA2-208ENST00000583927 HAUS7Q99871 368 aa12.03□□□□□ -0.48
SKA2-208ENST00000583927 GINM1Q9NU53 330 aa12.03□□□□□ -0.48
SKA2-208ENST00000583927 FLT1P17948 1338 aa12.03□□□□□ -0.48
SKA2-208ENST00000583927 RBBP6Q7Z6E9 1792 aaKnown RBP12.02□□□□□ -0.48
SKA2-208ENST00000583927 APBB1O00213 710 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms