RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 PPATQ06203 517 aa20.78■□□□□ 0.92
CDC42EP4-204ENST00000579611 PPIL2Q13356 520 aa20.78■□□□□ 0.92
CDC42EP4-204ENST00000579611 NOL9Q5SY16 702 aaKnown RBP20.78■□□□□ 0.92
CDC42EP4-204ENST00000579611 BRI3BPQ8WY22 251 aa20.78■□□□□ 0.92
CDC42EP4-204ENST00000579611 CCDC8Q9H0W5 538 aaPredicted RBP20.78■□□□□ 0.92
CDC42EP4-204ENST00000579611 TLR7Q9NYK1 1049 aaKnown RBP20.78■□□□□ 0.92
CDC42EP4-204ENST00000579611 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.78■□□□□ 0.92
CDC42EP4-204ENST00000579611 FKTNO75072 461 aa20.77■□□□□ 0.92
CDC42EP4-204ENST00000579611 INPP5BP32019 993 aa20.77■□□□□ 0.92
CDC42EP4-204ENST00000579611 PPP4CP60510 307 aa20.77■□□□□ 0.92
CDC42EP4-204ENST00000579611 PKN2Q16513 984 aaKnown RBP20.77■□□□□ 0.92
CDC42EP4-204ENST00000579611 RHPN1Q8TCX5 695 aa20.77■□□□□ 0.92
CDC42EP4-204ENST00000579611 OTUD5Q96G74 571 aa20.77■□□□□ 0.92
CDC42EP4-204ENST00000579611 DDX4Q9NQI0 724 aaKnown RBP20.77■□□□□ 0.92
CDC42EP4-204ENST00000579611 SNRKQ9NRH2 765 aa20.77■□□□□ 0.92
CDC42EP4-204ENST00000579611 OTOFQ9HC10 1997 aa20.77■□□□□ 0.92
CDC42EP4-204ENST00000579611 CCL15-CCL14A0A0B4J2E2 113 aa20.76■□□□□ 0.91
CDC42EP4-204ENST00000579611 PHF20L1A8MW92 1017 aa20.76■□□□□ 0.91
CDC42EP4-204ENST00000579611 IRF6O14896 467 aa20.76■□□□□ 0.91
CDC42EP4-204ENST00000579611 CCL15Q16663 113 aa20.76■□□□□ 0.91
CDC42EP4-204ENST00000579611 TMED8Q6PL24 325 aaPredicted RBP20.76■□□□□ 0.91
CDC42EP4-204ENST00000579611 ZCCHC17Q9NP64 241 aaKnown RBP20.76■□□□□ 0.91
CDC42EP4-204ENST00000579611 MYH2Q9UKX2 1941 aa20.75■□□□□ 0.91
CDC42EP4-204ENST00000579611 DDTLA6NHG4 134 aaPredicted RBP20.75■□□□□ 0.91
CDC42EP4-204ENST00000579611 TBC1D12O60347 775 aa20.75■□□□□ 0.91
CDC42EP4-204ENST00000579611 CETPP11597 493 aa20.75■□□□□ 0.91
CDC42EP4-204ENST00000579611 ZAP70P43403 619 aa20.75■□□□□ 0.91
CDC42EP4-204ENST00000579611 SNAPC2Q13487 334 aa20.75■□□□□ 0.91
CDC42EP4-204ENST00000579611 C20orf194Q5TEA3 1177 aa20.75■□□□□ 0.91
CDC42EP4-204ENST00000579611 KIF1BPQ96EK5 621 aa20.75■□□□□ 0.91
CDC42EP4-204ENST00000579611 COL2A1P02458 1487 aaPredicted RBP20.75■□□□□ 0.91
CDC42EP4-204ENST00000579611 RAB11FIP3O75154 756 aa20.74■□□□□ 0.91
CDC42EP4-204ENST00000579611 BAG3O95817 575 aa20.74■□□□□ 0.91
CDC42EP4-204ENST00000579611 CRHR2Q13324 411 aa20.74■□□□□ 0.91
CDC42EP4-204ENST00000579611 NAA16Q6N069 864 aaPredicted RBP20.74■□□□□ 0.91
CDC42EP4-204ENST00000579611 AACSQ86V21 672 aa20.74■□□□□ 0.91
CDC42EP4-204ENST00000579611 KCNH4Q9UQ05 1017 aa20.74■□□□□ 0.91
CDC42EP4-204ENST00000579611 PLCG2P16885 1265 aa20.73■□□□□ 0.91
CDC42EP4-204ENST00000579611 CLASRPQ8N2M8 674 aaKnown RBP20.73■□□□□ 0.91
CDC42EP4-204ENST00000579611 PIH1D3Q9NQM4 214 aaKnown RBP20.73■□□□□ 0.91
CDC42EP4-204ENST00000579611 PICALMQ13492 652 aa20.72■□□□□ 0.91
CDC42EP4-204ENST00000579611 ZSCAN29Q8IWY8 852 aaPredicted RBP20.72■□□□□ 0.91
CDC42EP4-204ENST00000579611 FAM43AQ8N2R8 423 aa20.72■□□□□ 0.91
CDC42EP4-204ENST00000579611 NOL10Q9BSC4 688 aaKnown RBP20.72■□□□□ 0.91
CDC42EP4-204ENST00000579611 OSBPL5Q9H0X9 879 aaPredicted RBP20.72■□□□□ 0.91
CDC42EP4-204ENST00000579611 CCDC85CA6NKD9 419 aa20.71■□□□□ 0.91
CDC42EP4-204ENST00000579611 CXCL11O14625 94 aa20.71■□□□□ 0.91
CDC42EP4-204ENST00000579611 RGS19P49795 217 aa20.71■□□□□ 0.91
CDC42EP4-204ENST00000579611 TEX11Q8IYF3 940 aa20.71■□□□□ 0.91
CDC42EP4-204ENST00000579611 SCYL3Q8IZE3 742 aa20.71■□□□□ 0.91
CDC42EP4-204ENST00000579611 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.71■□□□□ 0.91
CDC42EP4-204ENST00000579611 IL1RAPL2Q9NP60 686 aa20.71■□□□□ 0.91
CDC42EP4-204ENST00000579611 CTNND1O60716 968 aaKnown RBP20.7■□□□□ 0.9
CDC42EP4-204ENST00000579611 ADGRA1Q86SQ6 560 aa20.7■□□□□ 0.9
CDC42EP4-204ENST00000579611 CERS3Q8IU89 383 aa20.7■□□□□ 0.9
CDC42EP4-204ENST00000579611 SH3RF3Q8TEJ3 882 aaPredicted RBP20.7■□□□□ 0.9
CDC42EP4-204ENST00000579611 ZFYVE28Q9HCC9 887 aa20.7■□□□□ 0.9
CDC42EP4-204ENST00000579611 BTBD19C9JJ37 291 aa20.69■□□□□ 0.9
CDC42EP4-204ENST00000579611 TAF1CQ15572 869 aaPredicted RBP20.69■□□□□ 0.9
CDC42EP4-204ENST00000579611 FBXO46Q6PJ61 603 aaPredicted RBP20.69■□□□□ 0.9
CDC42EP4-204ENST00000579611 ERO1AQ96HE7 468 aa20.69■□□□□ 0.9
CDC42EP4-204ENST00000579611 DHX36Q9H2U1 1008 aaKnown RBP20.69■□□□□ 0.9
CDC42EP4-204ENST00000579611 AATFQ9NY61 560 aaKnown RBP eCLIP20.69■□□□□ 0.9
CDC42EP4-204ENST00000579611 PTPRAP18433 802 aa20.68■□□□□ 0.9
CDC42EP4-204ENST00000579611 SP3Q02447 781 aa20.68■□□□□ 0.9
CDC42EP4-204ENST00000579611 MOGSQ13724 837 aa20.68■□□□□ 0.9
CDC42EP4-204ENST00000579611 ANKRD23Q86SG2 305 aa20.68■□□□□ 0.9
CDC42EP4-204ENST00000579611 HPS5Q9UPZ3 1129 aa20.68■□□□□ 0.9
CDC42EP4-204ENST00000579611 TLR2O60603 784 aa20.67■□□□□ 0.9
CDC42EP4-204ENST00000579611 IFIT2P09913 472 aaKnown RBP20.67■□□□□ 0.9
CDC42EP4-204ENST00000579611 MAP3K12Q12852 859 aa20.67■□□□□ 0.9
CDC42EP4-204ENST00000579611 METTL16Q86W50 562 aaKnown RBP20.67■□□□□ 0.9
CDC42EP4-204ENST00000579611 PICK1Q9NRD5 415 aa20.67■□□□□ 0.9
CDC42EP4-204ENST00000579611 PI4KBQ9UBF8 816 aa20.67■□□□□ 0.9
CDC42EP4-204ENST00000579611 HERC5Q9UII4 1024 aaKnown RBP20.67■□□□□ 0.9
CDC42EP4-204ENST00000579611 ZHX2Q9Y6X8 837 aa20.67■□□□□ 0.9
CDC42EP4-204ENST00000579611 IDH1O75874 414 aaKnown RBP20.66■□□□□ 0.9
CDC42EP4-204ENST00000579611 CYP7A1P22680 504 aa20.66■□□□□ 0.9
CDC42EP4-204ENST00000579611 TTF1Q15361 905 aaPredicted RBP20.66■□□□□ 0.9
CDC42EP4-204ENST00000579611 ANTXR1Q9H6X2 564 aa20.66■□□□□ 0.9
CDC42EP4-204ENST00000579611 AFG3L2Q9Y4W6 797 aa20.66■□□□□ 0.9
CDC42EP4-204ENST00000579611 SLURP2P0DP57 97 aa20.65■□□□□ 0.9
CDC42EP4-204ENST00000579611 OTOP1Q7RTM1 612 aa20.65■□□□□ 0.9
CDC42EP4-204ENST00000579611 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.65■□□□□ 0.9
CDC42EP4-204ENST00000579611 NDUFB9Q9Y6M9 179 aa20.65■□□□□ 0.9
CDC42EP4-204ENST00000579611 FLT1P17948 1338 aa20.64■□□□□ 0.89
CDC42EP4-204ENST00000579611 A0A0G2JLL6 359 aaPredicted RBP20.64■□□□□ 0.89
CDC42EP4-204ENST00000579611 APBB1O00213 710 aa20.64■□□□□ 0.89
CDC42EP4-204ENST00000579611 FASTKD5Q7L8L6 764 aaKnown RBP20.64■□□□□ 0.89
CDC42EP4-204ENST00000579611 PRRT2Q7Z6L0 340 aaPredicted RBP20.64■□□□□ 0.89
CDC42EP4-204ENST00000579611 FOXP4Q8IVH2 680 aaPredicted RBP20.64■□□□□ 0.89
CDC42EP4-204ENST00000579611 MAGEB6Q8N7X4 407 aa20.64■□□□□ 0.89
CDC42EP4-204ENST00000579611 TGFBRAP1Q8WUH2 860 aa20.64■□□□□ 0.89
CDC42EP4-204ENST00000579611 TRIM17Q9Y577 477 aa20.64■□□□□ 0.89
CDC42EP4-204ENST00000579611 MAST2Q6P0Q8 1798 aa20.64■□□□□ 0.89
CDC42EP4-204ENST00000579611 ATP5JP18859 108 aa20.63■□□□□ 0.89
CDC42EP4-204ENST00000579611 ARHGEF6Q15052 776 aa20.63■□□□□ 0.89
CDC42EP4-204ENST00000579611 GPAT2Q6NUI2 795 aa20.63■□□□□ 0.89
CDC42EP4-204ENST00000579611 CD99L2Q8TCZ2 262 aa20.63■□□□□ 0.89
CDC42EP4-204ENST00000579611 TBC1D2Q9BYX2 928 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms